{"id":"https://openalex.org/W4404373878","doi":"https://doi.org/10.1186/s13040-024-00404-x","title":"Transcriptome-based network analysis related to regulatory T cells infiltration identified RCN1 as a potential biomarker for prognosis in clear cell renal cell carcinoma","display_name":"Transcriptome-based network analysis related to regulatory T cells infiltration identified RCN1 as a potential biomarker for prognosis in clear cell renal cell carcinoma","publication_year":2024,"publication_date":"2024-11-14","ids":{"openalex":"https://openalex.org/W4404373878","doi":"https://doi.org/10.1186/s13040-024-00404-x","pmid":"https://pubmed.ncbi.nlm.nih.gov/39543725"},"language":"en","primary_location":{"id":"doi:10.1186/s13040-024-00404-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-024-00404-x","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-024-00404-x","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-024-00404-x","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5020548753","display_name":"Qixin Yang","orcid":"https://orcid.org/0000-0001-5349-6992"},"institutions":[{"id":"https://openalex.org/I87780372","display_name":"Chongqing Medical University","ror":"https://ror.org/017z00e58","country_code":"CN","type":"education","lineage":["https://openalex.org/I87780372"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yang Qixin","raw_affiliation_strings":["Department of Urology, University-Town Hospital of Chongqing Medical University, Chongqing, 401331, P.R. China"],"affiliations":[{"raw_affiliation_string":"Department of Urology, University-Town Hospital of Chongqing Medical University, Chongqing, 401331, P.R. China","institution_ids":["https://openalex.org/I87780372"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085369861","display_name":"Jing Huang","orcid":"https://orcid.org/0000-0001-9820-7648"},"institutions":[{"id":"https://openalex.org/I87780372","display_name":"Chongqing Medical University","ror":"https://ror.org/017z00e58","country_code":"CN","type":"education","lineage":["https://openalex.org/I87780372"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huang Jing","raw_affiliation_strings":["Department of Rehabilitation, University-Town Hospital of Chongqing Medical University, Chongqing, 401331, P.R. China"],"affiliations":[{"raw_affiliation_string":"Department of Rehabilitation, University-Town Hospital of Chongqing Medical University, Chongqing, 401331, P.R. China","institution_ids":["https://openalex.org/I87780372"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044205235","display_name":"Jiang He","orcid":"https://orcid.org/0000-0001-8196-1257"},"institutions":[{"id":"https://openalex.org/I87780372","display_name":"Chongqing Medical University","ror":"https://ror.org/017z00e58","country_code":"CN","type":"education","lineage":["https://openalex.org/I87780372"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"He Jiang","raw_affiliation_strings":["Department of Urology, University-Town Hospital of Chongqing Medical University, Chongqing, 401331, P.R. China"],"affiliations":[{"raw_affiliation_string":"Department of Urology, University-Town Hospital of Chongqing Medical University, Chongqing, 401331, P.R. China","institution_ids":["https://openalex.org/I87780372"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102800878","display_name":"Xueyang Liu","orcid":"https://orcid.org/0009-0005-4063-9938"},"institutions":[{"id":"https://openalex.org/I87780372","display_name":"Chongqing Medical University","ror":"https://ror.org/017z00e58","country_code":"CN","type":"education","lineage":["https://openalex.org/I87780372"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Liu Xueyang","raw_affiliation_strings":["Department of Urology, University-Town Hospital of Chongqing Medical University, Chongqing, 401331, P.R. China"],"affiliations":[{"raw_affiliation_string":"Department of Urology, University-Town Hospital of Chongqing Medical University, Chongqing, 401331, P.R. China","institution_ids":["https://openalex.org/I87780372"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035400945","display_name":"Lu Yu","orcid":"https://orcid.org/0000-0002-8873-9138"},"institutions":[{"id":"https://openalex.org/I87780372","display_name":"Chongqing Medical University","ror":"https://ror.org/017z00e58","country_code":"CN","type":"education","lineage":["https://openalex.org/I87780372"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yu Lu","raw_affiliation_strings":["Department of Urology, University-Town Hospital of Chongqing Medical University, Chongqing, 401331, P.R. China"],"affiliations":[{"raw_affiliation_string":"Department of Urology, University-Town Hospital of Chongqing Medical University, Chongqing, 401331, P.R. China","institution_ids":["https://openalex.org/I87780372"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100721624","display_name":"Yuehua Li","orcid":"https://orcid.org/0000-0002-1504-946X"},"institutions":[{"id":"https://openalex.org/I87780372","display_name":"Chongqing Medical University","ror":"https://ror.org/017z00e58","country_code":"CN","type":"education","lineage":["https://openalex.org/I87780372"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Li Yuehua","raw_affiliation_strings":["Department of Urology, University-Town Hospital of Chongqing Medical University, Chongqing, 401331, P.R. China. liyuehualaoer@163.com"],"affiliations":[{"raw_affiliation_string":"Department of Urology, University-Town Hospital of Chongqing Medical University, Chongqing, 401331, P.R. China. liyuehualaoer@163.com","institution_ids":["https://openalex.org/I87780372"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5020548753"],"corresponding_institution_ids":["https://openalex.org/I87780372"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.7277,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.86029073,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":97,"max":98},"biblio":{"volume":"17","issue":"1","first_page":"51","last_page":"51"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10449","display_name":"Renal cell carcinoma treatment","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10449","display_name":"Renal cell carcinoma treatment","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12140","display_name":"Renal and related cancers","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9890000224113464,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.7924259901046753},{"id":"https://openalex.org/keywords/renal-cell-carcinoma","display_name":"Renal cell carcinoma","score":0.617856502532959},{"id":"https://openalex.org/keywords/biomarker","display_name":"Biomarker","score":0.5899258852005005},{"id":"https://openalex.org/keywords/infiltration","display_name":"Infiltration (HVAC)","score":0.5752119421958923},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5084094405174255},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4669877886772156},{"id":"https://openalex.org/keywords/clear-cell-renal-cell-carcinoma","display_name":"Clear cell renal cell carcinoma","score":0.44411739706993103},{"id":"https://openalex.org/keywords/cancer-research","display_name":"Cancer research","score":0.3690780997276306},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.32917121052742004},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.30207937955856323},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.2683414816856384},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.16286712884902954},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.12699511647224426},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12348631024360657},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.12288054823875427}],"concepts":[{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.7924259901046753},{"id":"https://openalex.org/C2777472916","wikidata":"https://www.wikidata.org/wiki/Q1164529","display_name":"Renal cell carcinoma","level":2,"score":0.617856502532959},{"id":"https://openalex.org/C2781197716","wikidata":"https://www.wikidata.org/wiki/Q864574","display_name":"Biomarker","level":2,"score":0.5899258852005005},{"id":"https://openalex.org/C153400128","wikidata":"https://www.wikidata.org/wiki/Q3150731","display_name":"Infiltration (HVAC)","level":2,"score":0.5752119421958923},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5084094405174255},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4669877886772156},{"id":"https://openalex.org/C2781278892","wikidata":"https://www.wikidata.org/wiki/Q18556340","display_name":"Clear cell renal cell carcinoma","level":3,"score":0.44411739706993103},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.3690780997276306},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.32917121052742004},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.30207937955856323},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.2683414816856384},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.16286712884902954},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.12699511647224426},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12348631024360657},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.12288054823875427},{"id":"https://openalex.org/C97355855","wikidata":"https://www.wikidata.org/wiki/Q11473","display_name":"Thermodynamics","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/s13040-024-00404-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-024-00404-x","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-024-00404-x","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},{"id":"pmid:39543725","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39543725","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData mining","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11566375","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11566375","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11566375/pdf/13040_2024_Article_404.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Min","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:2598e4ce41124f45a490be946866104e","is_oa":true,"landing_page_url":"https://doaj.org/article/2598e4ce41124f45a490be946866104e","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Mining, Vol 17, Iss 1, Pp 1-23 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s13040-024-00404-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-024-00404-x","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-024-00404-x","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6200000047683716,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4404373878.pdf","grobid_xml":"https://content.openalex.org/works/W4404373878.grobid-xml"},"referenced_works_count":58,"referenced_works":["https://openalex.org/W1964461613","https://openalex.org/W2022914202","https://openalex.org/W2032568555","https://openalex.org/W2051626595","https://openalex.org/W2059231207","https://openalex.org/W2066604995","https://openalex.org/W2095763169","https://openalex.org/W2096172976","https://openalex.org/W2100671540","https://openalex.org/W2126368530","https://openalex.org/W2136704317","https://openalex.org/W2160120519","https://openalex.org/W2164638888","https://openalex.org/W2177607084","https://openalex.org/W2321194749","https://openalex.org/W2419439766","https://openalex.org/W2551911481","https://openalex.org/W2589053981","https://openalex.org/W2614480329","https://openalex.org/W2757487320","https://openalex.org/W2763690609","https://openalex.org/W2793544961","https://openalex.org/W2889015813","https://openalex.org/W2899204074","https://openalex.org/W2946663348","https://openalex.org/W2951498062","https://openalex.org/W3029490475","https://openalex.org/W3042467660","https://openalex.org/W3094154571","https://openalex.org/W3133932842","https://openalex.org/W3139326336","https://openalex.org/W3149294290","https://openalex.org/W3160973971","https://openalex.org/W3178302783","https://openalex.org/W3202846380","https://openalex.org/W3205988422","https://openalex.org/W3206783007","https://openalex.org/W3213608450","https://openalex.org/W4210983935","https://openalex.org/W4213010264","https://openalex.org/W4225123279","https://openalex.org/W4283734142","https://openalex.org/W4293181914","https://openalex.org/W4313271091","https://openalex.org/W4319077142","https://openalex.org/W4361204468","https://openalex.org/W4367320137","https://openalex.org/W4386839554","https://openalex.org/W4388869913","https://openalex.org/W4389393882","https://openalex.org/W4389432311","https://openalex.org/W4389780978","https://openalex.org/W4390584944","https://openalex.org/W4390819995","https://openalex.org/W4391482791","https://openalex.org/W4391821839","https://openalex.org/W4392098844","https://openalex.org/W4392298394"],"related_works":["https://openalex.org/W2399513595","https://openalex.org/W4388386498","https://openalex.org/W2028462563","https://openalex.org/W2982720988","https://openalex.org/W3150324899","https://openalex.org/W2355608013","https://openalex.org/W4388725868","https://openalex.org/W2104762330","https://openalex.org/W4379374180","https://openalex.org/W2523545060"],"abstract_inverted_index":{"We":[0],"developed":[1],"a":[2,27],"prognostic":[3],"model":[4],"associated":[5],"with":[6],"Treg":[7],"infiltration,":[8],"which":[9],"facilitates":[10],"the":[11,21],"clinical":[12],"categorization":[13],"of":[14,24],"ccRCC":[15,28],"progression.":[16],"Moreover,":[17],"our":[18],"findings":[19],"underscore":[20],"significant":[22],"potential":[23],"RCN1":[25],"as":[26],"biomarker.":[29]},"counts_by_year":[{"year":2025,"cited_by_count":4}],"updated_date":"2026-03-17T17:19:04.345684","created_date":"2025-10-10T00:00:00"}
