{"id":"https://openalex.org/W4400261375","doi":"https://doi.org/10.1186/s13040-024-00369-x","title":"Identification of immune-associated biomarkers of diabetes nephropathy tubulointerstitial injury based on machine learning: a bioinformatics multi-chip integrated analysis","display_name":"Identification of immune-associated biomarkers of diabetes nephropathy tubulointerstitial injury based on machine learning: a bioinformatics multi-chip integrated analysis","publication_year":2024,"publication_date":"2024-07-01","ids":{"openalex":"https://openalex.org/W4400261375","doi":"https://doi.org/10.1186/s13040-024-00369-x","pmid":"https://pubmed.ncbi.nlm.nih.gov/38951833"},"language":"en","primary_location":{"id":"doi:10.1186/s13040-024-00369-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-024-00369-x","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-024-00369-x","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-024-00369-x","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008829405","display_name":"Lin Wang","orcid":"https://orcid.org/0000-0003-0881-9689"},"institutions":[{"id":"https://openalex.org/I17747738","display_name":"Beijing University of Chinese Medicine","ror":"https://ror.org/05damtm70","country_code":"CN","type":"education","lineage":["https://openalex.org/I17747738"]},{"id":"https://openalex.org/I4210121586","display_name":"Dongzhimen Hospital Affiliated to Beijing University of Chinese Medicine","ror":"https://ror.org/02yacz525","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121586"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Lin Wang","raw_affiliation_strings":["Beijing University of Chinese Medicine, Beijing, China","Key Laboratory of Chinese Internal Medicine of Ministry of Education and Beijing, Dongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, China","Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738"]},{"raw_affiliation_string":"Key Laboratory of Chinese Internal Medicine of Ministry of Education and Beijing, Dongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738"]},{"raw_affiliation_string":"Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738","https://openalex.org/I4210121586"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112360993","display_name":"Jiaming Su","orcid":null},"institutions":[{"id":"https://openalex.org/I17747738","display_name":"Beijing University of Chinese Medicine","ror":"https://ror.org/05damtm70","country_code":"CN","type":"education","lineage":["https://openalex.org/I17747738"]},{"id":"https://openalex.org/I4210121586","display_name":"Dongzhimen Hospital Affiliated to Beijing University of Chinese Medicine","ror":"https://ror.org/02yacz525","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121586"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiaming Su","raw_affiliation_strings":["Beijing University of Chinese Medicine, Beijing, China","Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738"]},{"raw_affiliation_string":"Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738","https://openalex.org/I4210121586"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038709596","display_name":"Zhongjie Liu","orcid":"https://orcid.org/0000-0001-8406-6709"},"institutions":[{"id":"https://openalex.org/I17747738","display_name":"Beijing University of Chinese Medicine","ror":"https://ror.org/05damtm70","country_code":"CN","type":"education","lineage":["https://openalex.org/I17747738"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhongjie Liu","raw_affiliation_strings":["Beijing University of Chinese Medicine, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100558735","display_name":"Shaowei Ding","orcid":null},"institutions":[{"id":"https://openalex.org/I17747738","display_name":"Beijing University of Chinese Medicine","ror":"https://ror.org/05damtm70","country_code":"CN","type":"education","lineage":["https://openalex.org/I17747738"]},{"id":"https://openalex.org/I4210121586","display_name":"Dongzhimen Hospital Affiliated to Beijing University of Chinese Medicine","ror":"https://ror.org/02yacz525","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121586"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shaowei Ding","raw_affiliation_strings":["Beijing University of Chinese Medicine, Beijing, China","Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738"]},{"raw_affiliation_string":"Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738","https://openalex.org/I4210121586"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040962710","display_name":"Yaotan Li","orcid":null},"institutions":[{"id":"https://openalex.org/I17747738","display_name":"Beijing University of Chinese Medicine","ror":"https://ror.org/05damtm70","country_code":"CN","type":"education","lineage":["https://openalex.org/I17747738"]},{"id":"https://openalex.org/I4210121586","display_name":"Dongzhimen Hospital Affiliated to Beijing University of Chinese Medicine","ror":"https://ror.org/02yacz525","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121586"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yaotan Li","raw_affiliation_strings":["Beijing University of Chinese Medicine, Beijing, China","Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738"]},{"raw_affiliation_string":"Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738","https://openalex.org/I4210121586"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113275564","display_name":"Baoluo Hou","orcid":"https://orcid.org/0009-0004-1772-2875"},"institutions":[{"id":"https://openalex.org/I17747738","display_name":"Beijing University of Chinese Medicine","ror":"https://ror.org/05damtm70","country_code":"CN","type":"education","lineage":["https://openalex.org/I17747738"]},{"id":"https://openalex.org/I4210121586","display_name":"Dongzhimen Hospital Affiliated to Beijing University of Chinese Medicine","ror":"https://ror.org/02yacz525","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121586"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Baoluo Hou","raw_affiliation_strings":["Beijing University of Chinese Medicine, Beijing, China","Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738"]},{"raw_affiliation_string":"Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738","https://openalex.org/I4210121586"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087439646","display_name":"Yuxin Hu","orcid":"https://orcid.org/0009-0002-0217-3821"},"institutions":[{"id":"https://openalex.org/I17747738","display_name":"Beijing University of Chinese Medicine","ror":"https://ror.org/05damtm70","country_code":"CN","type":"education","lineage":["https://openalex.org/I17747738"]},{"id":"https://openalex.org/I4210121586","display_name":"Dongzhimen Hospital Affiliated to Beijing University of Chinese Medicine","ror":"https://ror.org/02yacz525","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121586"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuxin Hu","raw_affiliation_strings":["Beijing University of Chinese Medicine, Beijing, China","Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738"]},{"raw_affiliation_string":"Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738","https://openalex.org/I4210121586"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053858970","display_name":"Zhaoxi Dong","orcid":null},"institutions":[{"id":"https://openalex.org/I17747738","display_name":"Beijing University of Chinese Medicine","ror":"https://ror.org/05damtm70","country_code":"CN","type":"education","lineage":["https://openalex.org/I17747738"]},{"id":"https://openalex.org/I4210121586","display_name":"Dongzhimen Hospital Affiliated to Beijing University of Chinese Medicine","ror":"https://ror.org/02yacz525","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121586"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhaoxi Dong","raw_affiliation_strings":["Beijing University of Chinese Medicine, Beijing, China","Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738"]},{"raw_affiliation_string":"Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738","https://openalex.org/I4210121586"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101804663","display_name":"Jingyi Tang","orcid":"https://orcid.org/0000-0002-8754-5809"},"institutions":[{"id":"https://openalex.org/I17747738","display_name":"Beijing University of Chinese Medicine","ror":"https://ror.org/05damtm70","country_code":"CN","type":"education","lineage":["https://openalex.org/I17747738"]},{"id":"https://openalex.org/I4210121586","display_name":"Dongzhimen Hospital Affiliated to Beijing University of Chinese Medicine","ror":"https://ror.org/02yacz525","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121586"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jingyi Tang","raw_affiliation_strings":["Beijing University of Chinese Medicine, Beijing, China","Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738"]},{"raw_affiliation_string":"Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738","https://openalex.org/I4210121586"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101585389","display_name":"Hongfang Liu","orcid":"https://orcid.org/0000-0002-5353-1580"},"institutions":[{"id":"https://openalex.org/I17747738","display_name":"Beijing University of Chinese Medicine","ror":"https://ror.org/05damtm70","country_code":"CN","type":"education","lineage":["https://openalex.org/I17747738"]},{"id":"https://openalex.org/I4210121586","display_name":"Dongzhimen Hospital Affiliated to Beijing University of Chinese Medicine","ror":"https://ror.org/02yacz525","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121586"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongfang Liu","raw_affiliation_strings":["Key Laboratory of Chinese Internal Medicine of Ministry of Education and Beijing, Dongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, China. lhfdoctor@126.com","Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China. lhfdoctor@126.com","Key Laboratory of Chinese Internal Medicine of Ministry of Education and Beijing, Dongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, China","Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Chinese Internal Medicine of Ministry of Education and Beijing, Dongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, China. lhfdoctor@126.com","institution_ids":["https://openalex.org/I4210121586","https://openalex.org/I17747738"]},{"raw_affiliation_string":"Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China. lhfdoctor@126.com","institution_ids":["https://openalex.org/I4210121586","https://openalex.org/I17747738"]},{"raw_affiliation_string":"Key Laboratory of Chinese Internal Medicine of Ministry of Education and Beijing, Dongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738"]},{"raw_affiliation_string":"Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738","https://openalex.org/I4210121586"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5112883291","display_name":"Weijing Liu","orcid":null},"institutions":[{"id":"https://openalex.org/I17747738","display_name":"Beijing University of Chinese Medicine","ror":"https://ror.org/05damtm70","country_code":"CN","type":"education","lineage":["https://openalex.org/I17747738"]},{"id":"https://openalex.org/I4210121586","display_name":"Dongzhimen Hospital Affiliated to Beijing University of Chinese Medicine","ror":"https://ror.org/02yacz525","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121586"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Weijing Liu","raw_affiliation_strings":["Beijing University of Chinese Medicine, Beijing, China. liuweijing_1977@hotmail.com","Key Laboratory of Chinese Internal Medicine of Ministry of Education and Beijing, Dongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, China. liuweijing_1977@hotmail.com","Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China. liuweijing_1977@hotmail.com","Key Laboratory of Chinese Internal Medicine of Ministry of Education and Beijing, Dongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, China","Beijing University of Chinese Medicine, Beijing, China","Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Beijing University of Chinese Medicine, Beijing, China. liuweijing_1977@hotmail.com","institution_ids":["https://openalex.org/I17747738"]},{"raw_affiliation_string":"Key Laboratory of Chinese Internal Medicine of Ministry of Education and Beijing, Dongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, China. liuweijing_1977@hotmail.com","institution_ids":["https://openalex.org/I4210121586","https://openalex.org/I17747738"]},{"raw_affiliation_string":"Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China. liuweijing_1977@hotmail.com","institution_ids":["https://openalex.org/I4210121586","https://openalex.org/I17747738"]},{"raw_affiliation_string":"Key Laboratory of Chinese Internal Medicine of Ministry of Education and Beijing, Dongzhimen Hospital, Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738"]},{"raw_affiliation_string":"Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738"]},{"raw_affiliation_string":"Renal Research Institution of Beijing University of Chinese Medicine, Dongzhimen Hospital, Affiliated to Beijing University of Chinese Medicine, Beijing, China","institution_ids":["https://openalex.org/I17747738","https://openalex.org/I4210121586"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5008829405"],"corresponding_institution_ids":["https://openalex.org/I17747738","https://openalex.org/I4210121586"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.4423,"has_fulltext":true,"cited_by_count":8,"citation_normalized_percentile":{"value":0.9050502,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"17","issue":"1","first_page":"20","last_page":"20"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10408","display_name":"Chronic Kidney Disease and Diabetes","score":0.9020000100135803,"subfield":{"id":"https://openalex.org/subfields/2727","display_name":"Nephrology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10408","display_name":"Chronic Kidney Disease and Diabetes","score":0.9020000100135803,"subfield":{"id":"https://openalex.org/subfields/2727","display_name":"Nephrology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10684","display_name":"Acute Kidney Injury Research","score":0.01600000075995922,"subfield":{"id":"https://openalex.org/subfields/2727","display_name":"Nephrology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11029","display_name":"Renal Diseases and Glomerulopathies","score":0.008500000461935997,"subfield":{"id":"https://openalex.org/subfields/2727","display_name":"Nephrology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/kegg","display_name":"KEGG","score":0.7807179689407349},{"id":"https://openalex.org/keywords/informatics","display_name":"Informatics","score":0.4988112449645996},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.49012336134910583},{"id":"https://openalex.org/keywords/diabetic-nephropathy","display_name":"Diabetic nephropathy","score":0.48907262086868286},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.48722758889198303},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.48081791400909424},{"id":"https://openalex.org/keywords/random-forest","display_name":"Random forest","score":0.4781554639339447},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.45389318466186523},{"id":"https://openalex.org/keywords/lasso","display_name":"Lasso (programming language)","score":0.44543060660362244},{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.4131987392902374},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.40340664982795715},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3799133896827698},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.32104891538619995},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.30511996150016785},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.2497628927230835},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.2480921745300293},{"id":"https://openalex.org/keywords/kidney","display_name":"Kidney","score":0.19213774800300598},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.1794142723083496},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.17849871516227722},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.1641691029071808},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.11237284541130066}],"concepts":[{"id":"https://openalex.org/C152724338","wikidata":"https://www.wikidata.org/wiki/Q909442","display_name":"KEGG","level":5,"score":0.7807179689407349},{"id":"https://openalex.org/C191630685","wikidata":"https://www.wikidata.org/wiki/Q4027615","display_name":"Informatics","level":2,"score":0.4988112449645996},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.49012336134910583},{"id":"https://openalex.org/C2779922275","wikidata":"https://www.wikidata.org/wiki/Q1129105","display_name":"Diabetic nephropathy","level":3,"score":0.48907262086868286},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.48722758889198303},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.48081791400909424},{"id":"https://openalex.org/C169258074","wikidata":"https://www.wikidata.org/wiki/Q245748","display_name":"Random forest","level":2,"score":0.4781554639339447},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.45389318466186523},{"id":"https://openalex.org/C37616216","wikidata":"https://www.wikidata.org/wiki/Q3218363","display_name":"Lasso (programming language)","level":2,"score":0.44543060660362244},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.4131987392902374},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.40340664982795715},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3799133896827698},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.32104891538619995},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.30511996150016785},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.2497628927230835},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.2480921745300293},{"id":"https://openalex.org/C2780091579","wikidata":"https://www.wikidata.org/wiki/Q9377","display_name":"Kidney","level":2,"score":0.19213774800300598},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.1794142723083496},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.17849871516227722},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.1641691029071808},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11237284541130066},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.0},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1186/s13040-024-00369-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-024-00369-x","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-024-00369-x","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},{"id":"pmid:38951833","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38951833","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData mining","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11218417","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11218417","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11218417/pdf/13040_2024_Article_369.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Min","raw_type":"Text"},{"id":"pmh:oai:digitalcommons.library.tmc.edu:uthshis_docs-1248","is_oa":false,"landing_page_url":"https://digitalcommons.library.tmc.edu/uthshis_docs/250","pdf_url":null,"source":{"id":"https://openalex.org/S4377196655","display_name":"Digital Commons-TMC (Texas Medical Center)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1337852284","host_organization_name":"Texas Medical Center","host_organization_lineage":["https://openalex.org/I1337852284"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Journal Articles","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:003bf045a0214a1e9fafce3ed078b66b","is_oa":true,"landing_page_url":"https://doaj.org/article/003bf045a0214a1e9fafce3ed078b66b","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Mining, Vol 17, Iss 1, Pp 1-26 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s13040-024-00369-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-024-00369-x","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-024-00369-x","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.6200000047683716,"id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G5928811324","display_name":null,"funder_award_id":"7244487","funder_id":"https://openalex.org/F4320334977","funder_display_name":"Beijing Municipal Natural Science Foundation"},{"id":"https://openalex.org/G8851720882","display_name":null,"funder_award_id":"8227141261","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320334977","display_name":"Beijing Municipal Natural Science Foundation","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4400261375.pdf","grobid_xml":"https://content.openalex.org/works/W4400261375.grobid-xml"},"referenced_works_count":99,"referenced_works":["https://openalex.org/W1570820201","https://openalex.org/W1887165066","https://openalex.org/W1964405385","https://openalex.org/W1964924750","https://openalex.org/W1973377103","https://openalex.org/W1975910513","https://openalex.org/W1980600137","https://openalex.org/W1982266855","https://openalex.org/W1986025060","https://openalex.org/W1986849266","https://openalex.org/W1996854381","https://openalex.org/W1998992316","https://openalex.org/W2005039062","https://openalex.org/W2018045523","https://openalex.org/W2021988356","https://openalex.org/W2024641784","https://openalex.org/W2030241337","https://openalex.org/W2034302451","https://openalex.org/W2039629336","https://openalex.org/W2043873569","https://openalex.org/W2058367373","https://openalex.org/W2069775587","https://openalex.org/W2074580711","https://openalex.org/W2082001761","https://openalex.org/W2085211563","https://openalex.org/W2087015191","https://openalex.org/W2096013681","https://openalex.org/W2097360283","https://openalex.org/W2100157885","https://openalex.org/W2100891309","https://openalex.org/W2106079757","https://openalex.org/W2110266296","https://openalex.org/W2113760558","https://openalex.org/W2117480529","https://openalex.org/W2119012442","https://openalex.org/W2122753551","https://openalex.org/W2124502714","https://openalex.org/W2139797791","https://openalex.org/W2140612433","https://openalex.org/W2148427262","https://openalex.org/W2159707944","https://openalex.org/W2163278360","https://openalex.org/W2240091556","https://openalex.org/W2401987785","https://openalex.org/W2518283902","https://openalex.org/W2559144666","https://openalex.org/W2621172390","https://openalex.org/W2734837302","https://openalex.org/W2734999907","https://openalex.org/W2782479267","https://openalex.org/W2790272775","https://openalex.org/W2791977325","https://openalex.org/W2792636089","https://openalex.org/W2809567029","https://openalex.org/W2885539806","https://openalex.org/W2888067390","https://openalex.org/W2891798224","https://openalex.org/W2895576044","https://openalex.org/W2896511926","https://openalex.org/W2896744833","https://openalex.org/W2908501315","https://openalex.org/W2911496423","https://openalex.org/W2913148916","https://openalex.org/W2923237341","https://openalex.org/W2943758187","https://openalex.org/W2946645851","https://openalex.org/W2949292019","https://openalex.org/W2958949191","https://openalex.org/W2981496710","https://openalex.org/W2998891547","https://openalex.org/W2999140222","https://openalex.org/W3005957464","https://openalex.org/W3009598378","https://openalex.org/W3036711917","https://openalex.org/W3103010094","https://openalex.org/W3137037499","https://openalex.org/W3139367066","https://openalex.org/W3161369018","https://openalex.org/W3162210112","https://openalex.org/W3170794560","https://openalex.org/W3175752499","https://openalex.org/W3196659037","https://openalex.org/W3201802228","https://openalex.org/W3214441687","https://openalex.org/W3216913081","https://openalex.org/W4200026682","https://openalex.org/W4210895382","https://openalex.org/W4223479130","https://openalex.org/W4280514922","https://openalex.org/W4280524873","https://openalex.org/W4282943120","https://openalex.org/W4287461718","https://openalex.org/W4294541781","https://openalex.org/W4295049035","https://openalex.org/W4385198380","https://openalex.org/W4386575279","https://openalex.org/W4386725636","https://openalex.org/W4393257580","https://openalex.org/W6659285692"],"related_works":["https://openalex.org/W1964572291","https://openalex.org/W4387948744","https://openalex.org/W1987520879","https://openalex.org/W2352732738","https://openalex.org/W2123060905","https://openalex.org/W4403810263","https://openalex.org/W2559588208","https://openalex.org/W1984964356","https://openalex.org/W3120676751","https://openalex.org/W1923384484"],"abstract_inverted_index":{"BACKGROUND:":[0],"Diabetic":[1],"nephropathy":[2,115],"(DN)":[3],"is":[4,65,477,493,509],"a":[5,69],"major":[6],"microvascular":[7],"complication":[8],"of":[9,17,25,59,75,96,187,253,257,270,276,279,300,314,355,371,414,466,474,484,491,502,507,519,533,549,596,612,635],"diabetes":[10],"and":[11,53,93,133,168,184,189,212,223,290,341,349,381,435,469,486,562,574,603,610,655],"has":[12],"become":[13],"the":[14,37,41,63,73,90,106,110,147,201,237,241,254,263,296,312,329,335,361,412,446,464,482,500,517,531,547,577,594,633],"leading":[15],"cause":[16],"end-stage":[18,31],"renal":[19,32,319],"disease":[20,33,42],"worldwide.":[21],"A":[22,353],"considerable":[23],"number":[24],"DN":[26,132,322,347,454,475,492,508,522,536,551,600,613,636],"patients":[27,271,348,455,476,552],"have":[28,461],"experienced":[29],"irreversible":[30],"progression":[34,74,94,634],"due":[35],"to":[36,39,62,67,125,158,175,229,244,285,294,310,546,648],"inability":[38],"diagnose":[40],"early.":[43],"Therefore,":[44,79],"reliable":[45],"biomarkers":[46,232,259,302,598],"that":[47,390,404,445,463],"are":[48,55,332,646],"helpful":[49,88],"for":[50,89,233,607],"early":[51,91,608],"diagnosis":[52,92,609],"treatment":[54,611],"identified.":[56,386],"The":[57,99,117,152,268],"migration":[58],"immune":[60,639],"cells":[61],"kidney":[64],"considered":[66],"be":[68,86],"key":[70],"step":[71],"in":[72,82,166,205,303,321,334,360,394,411,416,452,471,488,504,521,535,570,599,658],"DN-related":[76],"vascular":[77],"injury.":[78],"finding":[80],"markers":[81,448],"this":[83],"process":[84],"may":[85,631],"more":[87],"prediction":[95],"DN.":[97,659],"METHODS:":[98],"gene":[100,160],"chip":[101],"data":[102,362],"were":[103,194,227,358,375,379,385,392,408,553,567],"retrieved":[104,236],"from":[105,146,240,282,328,456],"GEO":[107,330],"database":[108,150,243,331],"using":[109,200,262],"search":[111],"term":[112],"'":[113,118,120],"diabetic":[114],"'.":[116],"limma":[119],"software":[121,203,266],"package":[122,154,204],"was":[123,141,156,170,260,288,292,308,525,539],"used":[124,157,228,293,309],"identify":[126,159,176],"differentially":[127,197,367],"expressed":[128,198,368],"genes":[129,144,199,357,374,378,384,407,617],"(DEGs)":[130],"between":[131,576],"control":[134],"samples.":[135],"Gene":[136,179],"set":[137],"enrichment":[138,182],"analysis":[139,183,193,252,307,336,388,402],"(GSEA)":[140],"performed":[142,195,261],"on":[143,196,318],"obtained":[145],"molecular":[148,653],"characteristic":[149],"(MSigDB.":[151],"R":[153],"'WGCNA'":[155],"modules":[161],"associated":[162],"with":[163,172,480,496,512,528,542],"tubulointerstitial":[164,238,439,601],"injury":[165,602],"DN,":[167],"it":[169],"crossed":[171],"immune-related":[173,231,258,301,315,369,440,597],"DEGs":[174],"target":[177,406],"genes.":[178],"ontology":[180],"(GO)":[181],"Kyoto":[185],"Encyclopedia":[186],"Genes":[188],"Genomes":[190],"(KEGG)":[191],"pathway":[192],"'ClusterProfiler'":[202],"R.":[206],"Three":[207],"methods,":[208],"least":[209],"absolute":[210],"shrinkage":[211],"selection":[213],"operator":[214],"(LASSO),":[215],"support":[216],"vector":[217],"machine":[218,425],"recursive":[219],"feature":[220],"elimination":[221],"(SVM-RFE)":[222],"random":[224],"forest":[225],"(RF),":[226],"select":[230],"diagnosis.":[234],"We":[235,364],"dataset":[239],"Nephroseq":[242],"construct":[245],"an":[246],"external":[247],"validation":[248,443],"dataset.":[249],"Unsupervised":[250],"clustering":[251],"expression":[255,298,317,465,483,501,518,532],"levels":[256],"'ConsensusClusterPlus":[264],"'R":[265],"package.":[267],"urine":[269,472,489,505,523,537],"who":[272],"visited":[273],"Dongzhimen":[274],"Hospital":[275],"Beijing":[277],"University":[278],"Chinese":[280],"Medicine":[281],"September":[283],"2021":[284],"March":[286],"2023":[287],"collected,":[289],"Elisa":[291],"detect":[295,311],"mRNA":[297],"level":[299,548],"urine.":[304],"Pearson":[305],"correlation":[306],"effect":[313],"biomarker":[316],"function":[320],"patients.":[323,614],"RESULTS:":[324],"Four":[325],"microarray":[326],"datasets":[327,344],"included":[333,345],":":[337],"GSE30122,":[338],"GSE47185,":[339],"GSE99340":[340],"GSE104954.":[342],"These":[343],"63":[346],"55":[350],"healthy":[351,457],"controls.":[352,458],"total":[354],"9415":[356],"detected":[359],"set.":[363],"found":[365],"153":[366],"genes,":[370,424],"which":[372],"112":[373],"up-regulated,":[376],"41":[377],"down-regulated,":[380],"119":[382,422],"overlapping":[383,423],"GO":[387],"showed":[389,403,449],"they":[391],"involved":[393,410],"various":[395],"biological":[396],"processes":[397],"including":[398],"leukocyte-mediated":[399],"immunity.":[400],"KEGG":[401],"these":[405,421],"mainly":[409],"formation":[413],"phagosomes":[415],"Staphylococcus":[417],"aureus":[418],"infection.":[419],"Among":[420],"learning":[426],"results":[427],"identified":[428],"AGR2,":[429,467,572,619],"CCR2,":[430,620],"CEBPD,":[431,621],"CISH,":[432,622],"CX3CR1,":[433,623],"DEFB1":[434,503,534,575],"FSTL1":[436,470,487,625],"as":[437,627],"potential":[438,605],"biomarkers.":[441],"External":[442],"suggested":[444],"above":[447],"diagnostic":[450],"efficacy":[451],"distinguishing":[453],"Clinical":[459],"studies":[460,645],"shown":[462],"CX3CR1":[468,485,520],"samples":[473,490,506,524,538],"negatively":[478,510,540],"correlated":[479,495,511,527,541],"GFR,":[481],"positively":[494,526],"serum":[497,513],"creatinine,":[498],"while":[499,530],"creatinine.":[514],"In":[515],"addition,":[516],"proteinuria,":[529,550],"proteinuria.":[543],"Finally,":[544],"according":[545],"divided":[554],"into":[555,593],"nephrotic":[556],"proteinuria":[557,564],"group":[558],"(n":[559],"=":[560],"24)":[561],"subrenal":[563],"group.":[565],"There":[566],"significant":[568],"differences":[569],"urinary":[571],"CCR2":[573],"two":[578],"groups":[579],"by":[580,637],"unpaired":[581],"t":[582],"test":[583],"(P":[584],"<":[585],"0.05).":[586],"CONCLUSIONS:":[587],"Our":[588],"study":[589],"provides":[590,604],"new":[591],"insights":[592],"role":[595],"targets":[606],"Seven":[615],"different":[616],"(":[618],"DEFB1,":[624],"),":[626],"promising":[628],"sensitive":[629],"biomarkers,":[630],"affect":[632],"regulating":[638],"inflammatory":[640],"response.":[641],"However,":[642],"further":[643],"comprehensive":[644],"needed":[647],"fully":[649],"understand":[650],"their":[651],"exact":[652],"mechanisms":[654],"functional":[656],"pathways":[657]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":1}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
