{"id":"https://openalex.org/W4391353343","doi":"https://doi.org/10.1186/s13040-024-00355-3","title":"Revealing third-order interactions through the integration of machine learning and entropy methods in genomic studies","display_name":"Revealing third-order interactions through the integration of machine learning and entropy methods in genomic studies","publication_year":2024,"publication_date":"2024-01-30","ids":{"openalex":"https://openalex.org/W4391353343","doi":"https://doi.org/10.1186/s13040-024-00355-3","pmid":"https://pubmed.ncbi.nlm.nih.gov/38291454"},"language":"en","primary_location":{"id":"doi:10.1186/s13040-024-00355-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-024-00355-3","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-024-00355-3","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-024-00355-3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5108131407","display_name":"Burcu Yald\u0131z","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Burcu Yald\u0131z","raw_affiliation_strings":["Department of Health Informatics, Graduate School of Informatics, METU, Ankara, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Health Informatics, Graduate School of Informatics, METU, Ankara, Turkey","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101575123","display_name":"Onur Erdo\u011fan","orcid":"https://orcid.org/0000-0002-6171-3042"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Onur Erdo\u011fan","raw_affiliation_strings":["Department of Health Informatics, Graduate School of Informatics, METU, Ankara, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Health Informatics, Graduate School of Informatics, METU, Ankara, Turkey","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002664458","display_name":"Sevda Rafatov","orcid":"https://orcid.org/0000-0002-5738-731X"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sevda Rafatov","raw_affiliation_strings":["Department of Health Informatics, Graduate School of Informatics, METU, Ankara, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Health Informatics, Graduate School of Informatics, METU, Ankara, Turkey","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023889985","display_name":"Cem \u0130yig\u00fcn","orcid":"https://orcid.org/0000-0002-2845-224X"},"institutions":[{"id":"https://openalex.org/I201799495","display_name":"Middle East Technical University","ror":"https://ror.org/014weej12","country_code":"TR","type":"education","lineage":["https://openalex.org/I201799495"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Cem Iyig\u00fcn","raw_affiliation_strings":["Department of Industrial Engineering, METU, Ankara, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Industrial Engineering, METU, Ankara, Turkey","institution_ids":["https://openalex.org/I201799495"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055754523","display_name":"Ye\u015fim Ayd\u0131n Son","orcid":"https://orcid.org/0000-0002-8118-4272"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Ye\u015fim Ayd\u0131n Son","raw_affiliation_strings":["Department of Health Informatics, Graduate School of Informatics, METU, Ankara, Turkey. yesim@metu.edu.tr","Graduate School of Informatics, ODTU-NOROM, METU, Ankara, Turkey. yesim@metu.edu.tr","Graduate School of Informatics, ODTU-NOROM, METU, Ankara, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Health Informatics, Graduate School of Informatics, METU, Ankara, Turkey. yesim@metu.edu.tr","institution_ids":[]},{"raw_affiliation_string":"Graduate School of Informatics, ODTU-NOROM, METU, Ankara, Turkey. yesim@metu.edu.tr","institution_ids":[]},{"raw_affiliation_string":"Graduate School of Informatics, ODTU-NOROM, METU, Ankara, Turkey","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5055754523"],"corresponding_institution_ids":[],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.055,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.8579264,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"17","issue":"1","first_page":"3","last_page":"3"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9884999990463257,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9884999990463257,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.006500000134110451,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.0010000000474974513,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genome-wide-association-study","display_name":"Genome-wide association study","score":0.7133990526199341},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5315328240394592},{"id":"https://openalex.org/keywords/epistasis","display_name":"Epistasis","score":0.5027692317962646},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.49116894602775574},{"id":"https://openalex.org/keywords/genetic-association","display_name":"Genetic association","score":0.4911317527294159},{"id":"https://openalex.org/keywords/snp","display_name":"SNP","score":0.4301258325576782},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.392225444316864},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3762752413749695},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3406432271003723},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.33065247535705566},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2810424566268921},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.26464277505874634},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.19752153754234314},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.10342282056808472}],"concepts":[{"id":"https://openalex.org/C106208931","wikidata":"https://www.wikidata.org/wiki/Q1098876","display_name":"Genome-wide association study","level":5,"score":0.7133990526199341},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5315328240394592},{"id":"https://openalex.org/C61727976","wikidata":"https://www.wikidata.org/wiki/Q751748","display_name":"Epistasis","level":3,"score":0.5027692317962646},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.49116894602775574},{"id":"https://openalex.org/C186413461","wikidata":"https://www.wikidata.org/wiki/Q744727","display_name":"Genetic association","level":5,"score":0.4911317527294159},{"id":"https://openalex.org/C139275648","wikidata":"https://www.wikidata.org/wiki/Q17134011","display_name":"SNP","level":5,"score":0.4301258325576782},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.392225444316864},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3762752413749695},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3406432271003723},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.33065247535705566},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2810424566268921},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.26464277505874634},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.19752153754234314},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10342282056808472}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1186/s13040-024-00355-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-024-00355-3","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-024-00355-3","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},{"id":"pmid:38291454","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/38291454","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData mining","raw_type":null},{"id":"pmh:oai:https://open.metu.edu.tr:11511/108625","is_oa":true,"landing_page_url":"https://biodatamining.biomedcentral.com/articles/10.1186/s13040-024-00355-3","pdf_url":"https://link.springer.com/content/pdf/10.1186/s13040-024-00355-3.pdf","source":{"id":"https://openalex.org/S4306402495","display_name":"OpenMETU (Middle East Technical University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I201799495","host_organization_name":"Middle East Technical University","host_organization_lineage":["https://openalex.org/I201799495"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:10826120","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10826120","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10826120/pdf/13040_2024_Article_355.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Min","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:98318ef694c74f83995a627820268998","is_oa":true,"landing_page_url":"https://doaj.org/article/98318ef694c74f83995a627820268998","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Mining, Vol 17, Iss 1, Pp 1-17 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s13040-024-00355-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-024-00355-3","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-024-00355-3","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.44999998807907104,"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land"}],"awards":[{"id":"https://openalex.org/G1012222616","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320309432","funder_display_name":"F. Hoffmann-La Roche"},{"id":"https://openalex.org/G1298807586","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320327918","funder_display_name":"H. Lundbeck A/S"},{"id":"https://openalex.org/G1336222015","display_name":null,"funder_award_id":"AG024904","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G1554142629","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320322148","funder_display_name":"Eisai"},{"id":"https://openalex.org/G1593117279","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320309470","funder_display_name":"Meso Scale Diagnostics"},{"id":"https://openalex.org/G1650819308","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320308604","funder_display_name":"Biogen"},{"id":"https://openalex.org/G1880935189","display_name":null,"funder_award_id":"AG024904","funder_id":"https://openalex.org/F4320327918","funder_display_name":"H. Lundbeck A/S"},{"id":"https://openalex.org/G2100670906","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320310388","funder_display_name":"Novartis Pharmaceuticals Corporation"},{"id":"https://openalex.org/G2152643862","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320311551","funder_display_name":"Northern California Institute for Research and Education"},{"id":"https://openalex.org/G2189010064","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320306078","funder_display_name":"U.S. Department of Defense"},{"id":"https://openalex.org/G2340207221","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320310045","funder_display_name":"BioClinica"},{"id":"https://openalex.org/G2471646051","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320327918","funder_display_name":"H. Lundbeck A/S"},{"id":"https://openalex.org/G2522063444","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320332193","funder_display_name":"Genentech"},{"id":"https://openalex.org/G2765936994","display_name":null,"funder_award_id":"ARDEB 1003 Grant SBAG -216S468","funder_id":"https://openalex.org/F4320322626","funder_display_name":"T\u00fcrkiye Bilimsel ve Teknolojik Ara\u015ft\u0131rma Kurumu"},{"id":"https://openalex.org/G3131374986","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320307115","funder_display_name":"Bristol-Myers Squibb"},{"id":"https://openalex.org/G3553156159","display_name":null,"funder_award_id":"AG024904","funder_id":"https://openalex.org/F4320307115","funder_display_name":"Bristol-Myers Squibb"},{"id":"https://openalex.org/G3710456697","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320307758","funder_display_name":"Eli Lilly and Company"},{"id":"https://openalex.org/G3752451908","display_name":null,"funder_award_id":"AG024904","funder_id":"https://openalex.org/F4320327235","funder_display_name":"Servier"},{"id":"https://openalex.org/G3870774570","display_name":null,"funder_award_id":"AG024904","funder_id":"https://openalex.org/F4320332193","funder_display_name":"Genentech"},{"id":"https://openalex.org/G3908963977","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320334506","funder_display_name":"Canadian Institutes of Health Research"},{"id":"https://openalex.org/G3966393351","display_name":null,"funder_award_id":"AG024904","funder_id":"https://openalex.org/F4320309432","funder_display_name":"F. Hoffmann-La Roche"},{"id":"https://openalex.org/G4119534169","display_name":null,"funder_award_id":"W81XWH","funder_id":"https://openalex.org/F4320306078","funder_display_name":"U.S. Department of Defense"},{"id":"https://openalex.org/G43180419","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320322148","funder_display_name":"Eisai"},{"id":"https://openalex.org/G4475667458","display_name":null,"funder_award_id":"W81XWH-12-2-","funder_id":"https://openalex.org/F4320306078","funder_display_name":"U.S. Department of Defense"},{"id":"https://openalex.org/G4501223628","display_name":null,"funder_award_id":"AG024904","funder_id":"https://openalex.org/F4320329118","funder_display_name":"IXICO"},{"id":"https://openalex.org/G4558216502","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4800177743","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320310045","funder_display_name":"BioClinica"},{"id":"https://openalex.org/G5209990037","display_name":null,"funder_award_id":"AG024904","funder_id":"https://openalex.org/F4320307765","funder_display_name":"Pfizer"},{"id":"https://openalex.org/G528601746","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320334506","funder_display_name":"Canadian Institutes of Health Research"},{"id":"https://openalex.org/G5365730499","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320308668","funder_display_name":"University of Southern California"},{"id":"https://openalex.org/G5654639750","display_name":null,"funder_award_id":"AG024904","funder_id":"https://openalex.org/F4320310045","funder_display_name":"BioClinica"},{"id":"https://openalex.org/G5740349702","display_name":null,"funder_award_id":"AG024904","funder_id":"https://openalex.org/F4320309470","funder_display_name":"Meso Scale Diagnostics"},{"id":"https://openalex.org/G5850682332","display_name":null,"funder_award_id":"W81XWH","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G613619302","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320310388","funder_display_name":"Novartis Pharmaceuticals Corporation"},{"id":"https://openalex.org/G6173816828","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320307765","funder_display_name":"Pfizer"},{"id":"https://openalex.org/G6210868510","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320308604","funder_display_name":"Biogen"},{"id":"https://openalex.org/G6371410416","display_name":null,"funder_award_id":"AG024904","funder_id":"https://openalex.org/F4320308604","funder_display_name":"Biogen"},{"id":"https://openalex.org/G6412110892","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320332193","funder_display_name":"Genentech"},{"id":"https://openalex.org/G6447063303","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320309470","funder_display_name":"Meso Scale Diagnostics"},{"id":"https://openalex.org/G6719828067","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320329118","funder_display_name":"IXICO"},{"id":"https://openalex.org/G6792506723","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320307115","funder_display_name":"Bristol-Myers Squibb"},{"id":"https://openalex.org/G6899163935","display_name":null,"funder_award_id":"AG024904","funder_id":"https://openalex.org/F4320322148","funder_display_name":"Eisai"},{"id":"https://openalex.org/G6948409098","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320309432","funder_display_name":"F. Hoffmann-La Roche"},{"id":"https://openalex.org/G72415811","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320311551","funder_display_name":"Northern California Institute for Research and Education"},{"id":"https://openalex.org/G7298697282","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320329118","funder_display_name":"IXICO"},{"id":"https://openalex.org/G764699806","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7799614282","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320307765","funder_display_name":"Pfizer"},{"id":"https://openalex.org/G781725486","display_name":null,"funder_award_id":"AG024904","funder_id":"https://openalex.org/F4320307758","funder_display_name":"Eli Lilly and Company"},{"id":"https://openalex.org/G7854119329","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320306078","funder_display_name":"U.S. Department of Defense"},{"id":"https://openalex.org/G8281378126","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320327235","funder_display_name":"Servier"},{"id":"https://openalex.org/G839208290","display_name":null,"funder_award_id":"AG024904","funder_id":"https://openalex.org/F4320310388","funder_display_name":"Novartis Pharmaceuticals Corporation"},{"id":"https://openalex.org/G8852128998","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320327235","funder_display_name":"Servier"},{"id":"https://openalex.org/G8895907669","display_name":null,"funder_award_id":"AG024904","funder_id":"https://openalex.org/F4320306078","funder_display_name":"U.S. Department of Defense"},{"id":"https://openalex.org/G8897063270","display_name":null,"funder_award_id":"U01 AG024904","funder_id":"https://openalex.org/F4320308668","funder_display_name":"University of Southern California"},{"id":"https://openalex.org/G8957659042","display_name":null,"funder_award_id":"W81XWH-12-2-0012","funder_id":"https://openalex.org/F4320307758","funder_display_name":"Eli Lilly and Company"}],"funders":[{"id":"https://openalex.org/F4320306078","display_name":"U.S. Department of Defense","ror":"https://ror.org/0447fe631"},{"id":"https://openalex.org/F4320307115","display_name":"Bristol-Myers Squibb","ror":"https://ror.org/00gtmwv55"},{"id":"https://openalex.org/F4320307758","display_name":"Eli Lilly and Company","ror":"https://ror.org/01qat3289"},{"id":"https://openalex.org/F4320307765","display_name":"Pfizer","ror":"https://ror.org/01xdqrp08"},{"id":"https://openalex.org/F4320308604","display_name":"Biogen","ror":"https://ror.org/02jqkb192"},{"id":"https://openalex.org/F4320308668","display_name":"University of Southern California","ror":"https://ror.org/03taz7m60"},{"id":"https://openalex.org/F4320309432","display_name":"F. Hoffmann-La Roche","ror":"https://ror.org/00by1q217"},{"id":"https://openalex.org/F4320309470","display_name":"Meso Scale Diagnostics","ror":"https://ror.org/05jgy0m16"},{"id":"https://openalex.org/F4320310045","display_name":"BioClinica","ror":"https://ror.org/03t95yr58"},{"id":"https://openalex.org/F4320310388","display_name":"Novartis Pharmaceuticals Corporation","ror":"https://ror.org/028fhxy95"},{"id":"https://openalex.org/F4320311551","display_name":"Northern California Institute for Research and Education","ror":"https://ror.org/05p48p517"},{"id":"https://openalex.org/F4320322148","display_name":"Eisai","ror":"https://ror.org/04vvh7p27"},{"id":"https://openalex.org/F4320322626","display_name":"T\u00fcrkiye Bilimsel ve Teknolojik Ara\u015ft\u0131rma Kurumu","ror":"https://ror.org/04w9kkr77"},{"id":"https://openalex.org/F4320327235","display_name":"Servier","ror":"https://ror.org/034e7c066"},{"id":"https://openalex.org/F4320327918","display_name":"H. Lundbeck A/S","ror":null},{"id":"https://openalex.org/F4320329118","display_name":"IXICO","ror":"https://ror.org/00paezp73"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332193","display_name":"Genentech","ror":"https://ror.org/04gndp242"},{"id":"https://openalex.org/F4320334506","display_name":"Canadian Institutes of Health Research","ror":"https://ror.org/01gavpb45"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4391353343.pdf"},"referenced_works_count":64,"referenced_works":["https://openalex.org/W1971964980","https://openalex.org/W1977738320","https://openalex.org/W1988427943","https://openalex.org/W2000223104","https://openalex.org/W2002592274","https://openalex.org/W2004159986","https://openalex.org/W2010124885","https://openalex.org/W2010739896","https://openalex.org/W2016138806","https://openalex.org/W2017456650","https://openalex.org/W2017586049","https://openalex.org/W2024607788","https://openalex.org/W2026970282","https://openalex.org/W2034622004","https://openalex.org/W2036362108","https://openalex.org/W2046234948","https://openalex.org/W2051616601","https://openalex.org/W2059778110","https://openalex.org/W2063230842","https://openalex.org/W2063575312","https://openalex.org/W2086099578","https://openalex.org/W2097508746","https://openalex.org/W2097948046","https://openalex.org/W2098918791","https://openalex.org/W2099085143","https://openalex.org/W2101279094","https://openalex.org/W2106578986","https://openalex.org/W2113082345","https://openalex.org/W2115779804","https://openalex.org/W2122522567","https://openalex.org/W2125487751","https://openalex.org/W2129338678","https://openalex.org/W2143884110","https://openalex.org/W2145492845","https://openalex.org/W2147976902","https://openalex.org/W2150990910","https://openalex.org/W2152119060","https://openalex.org/W2157395790","https://openalex.org/W2159675211","https://openalex.org/W2159734538","https://openalex.org/W2161633633","https://openalex.org/W2418750464","https://openalex.org/W2533949033","https://openalex.org/W2728246829","https://openalex.org/W2746339758","https://openalex.org/W2794134966","https://openalex.org/W2802679636","https://openalex.org/W2898780495","https://openalex.org/W2908002252","https://openalex.org/W2911964244","https://openalex.org/W2944545583","https://openalex.org/W2950604376","https://openalex.org/W3012914905","https://openalex.org/W3090331596","https://openalex.org/W3102027041","https://openalex.org/W3113266711","https://openalex.org/W3198732863","https://openalex.org/W3202022250","https://openalex.org/W3207019463","https://openalex.org/W3214092816","https://openalex.org/W4206592964","https://openalex.org/W4226077547","https://openalex.org/W4287524276","https://openalex.org/W6728387931"],"related_works":["https://openalex.org/W2140249224","https://openalex.org/W1997352593","https://openalex.org/W2143489661","https://openalex.org/W3206555169","https://openalex.org/W4281711902","https://openalex.org/W2070581548","https://openalex.org/W3157359833","https://openalex.org/W2413660786","https://openalex.org/W3024317680","https://openalex.org/W2571299013"],"abstract_inverted_index":{"BACKGROUND:":[0],"Non-linear":[1],"relationships":[2,113],"at":[3],"the":[4,11,27,40,107,149,152,239,241,291,304,317,327,332],"genotype":[5],"level":[6],"are":[7,133,156,220,232,248,271,285],"essential":[8],"in":[9,29,116,160,245,251,300],"understanding":[10],"genetic":[12,41,306],"interactions":[13,71,307,330],"of":[14,26,43,151,182,201,208,216],"complex":[15,31,305],"disease":[16,344],"traits.":[17],"Genome-wide":[18],"association":[19,25,345],"Studies":[20,48],"(GWAS)":[21],"have":[22,49,64],"revealed":[23,195],"statistical":[24,58],"SNPs":[28,194,199,214,231,334],"many":[30],"diseases.":[32],"As":[33],"GWAS":[34],"results":[35],"could":[36],"not":[37,157],"thoroughly":[38],"reveal":[39],"background":[42],"these":[44,69,268],"disorders,":[45],"Genome-Wide":[46],"Interaction":[47],"started":[50],"to":[51,105,120,222,244,311],"gain":[52],"importance.":[53],"In":[54],"recent":[55],"years,":[56],"various":[57],"approaches,":[59],"such":[60],"as":[61,188,287,320],"entropy-based":[62,99,140,318,358],"methods,":[63],"been":[65],"suggested":[66],"for":[67,170,273,276,290,343],"revealing":[68],"non-additive":[70],"between":[72,114,331],"variants.":[73],"This":[74,337],"study":[75,302],"presents":[76],"a":[77,189,277,321,340],"novel":[78],"prioritization":[79,181],"workflow":[80,94],"integrating":[81,136,353],"two-step":[82],"Random":[83],"Forest":[84],"(RF)":[85],"modeling":[86],"and":[87,123,139,180,212,260,325,357],"entropy":[88,297],"analysis":[89,138,176],"after":[90],"PLINK":[91,178],"filtering.":[92],"PLINK-RF-RF":[93,137],"is":[95,168,339],"followed":[96],"by":[97,135,174,177,196,335,352],"an":[98],"3-way":[100,329],"interaction":[101,142,162,359],"information":[102,143],"(3WII)":[103,144],"method":[104],"capture":[106],"hidden":[108],"patterns":[109],"resulting":[110],"from":[111,130,203,210,218,316],"non-linear":[112],"genotypes":[115],"Late-Onset":[117],"Alzheimer":[118,227],"Disease":[119],"discover":[121],"early":[122],"differential":[124],"diagnosis":[125],"markers.":[126],"RESULTS:":[127],"Three":[128],"models":[129],"different":[131],"datasets":[132,173,247],"developed":[134],"three-way":[141],"calculation":[145],"method,":[146],"which":[147,155,347],"enables":[148],"detection":[150],"third-order":[153],"interactions,":[154],"primarily":[158],"considered":[159],"epistatic":[161],"studies.":[163],"A":[164],"reduced":[165],"SNP":[166,183,206],"set":[167],"selected":[169],"all":[171,246,282],"three":[172],"3WII":[175,283,319],"filtering":[179],"with":[184,226,234],"RF-RF":[185],"modeling,":[186],"promising":[187,341],"model":[190,322],"minimization":[191,323],"approach.":[192],"Among":[193],"3WII,":[197],"4":[198,213],"out":[200,207,215],"19":[202],"GenADA,":[204],"1":[205],"27":[209],"ADNI,":[211],"106":[217],"NCRAD":[219],"mapped":[221,243],"genes":[223,240],"directly":[224],"associated":[225,233],"Disease.":[228],"Additionally,":[229],"several":[230],"other":[235,354],"neurological":[236],"disorders.":[237],"Also,":[238],"variants":[242,284],"significantly":[249,309],"enriched":[250],"calcium":[252],"ion":[253],"binding,":[254],"extracellular":[255],"matrix,":[256],"external":[257],"encapsulating":[258],"structure,":[259],"RUNX1":[261],"regulates":[262],"estrogen":[263],"receptor-mediated":[264],"transcription":[265],"pathways.":[266],"Therefore,":[267],"functional":[269],"pathways":[270],"proposed":[272,286],"further":[274],"examination":[275],"possible":[278],"LOAD":[279,293,312],"association.":[280],"Besides,":[281],"candidate":[288],"biomarkers":[289],"genotyping-based":[292],"diagnosis.":[294],"CONCLUSION:":[295],"The":[296],"approach":[298,342],"performed":[299],"this":[301],"reveals":[303],"that":[308],"contribute":[310],"risk.":[313],"We":[314],"benefited":[315],"step":[324],"determined":[326],"significant":[328],"prioritized":[333],"PLINK-RF-RF.":[336],"framework":[338],"studies,":[346],"can":[348],"also":[349],"be":[350],"modified":[351],"machine":[355],"learning":[356],"methods.":[360]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1}],"updated_date":"2026-05-03T08:25:01.440150","created_date":"2025-10-10T00:00:00"}
