{"id":"https://openalex.org/W3109627689","doi":"https://doi.org/10.1186/s13040-021-00233-2","title":"COVID-TRACK: world and USA SARS-COV-2 testing and COVID-19 tracking","display_name":"COVID-TRACK: world and USA SARS-COV-2 testing and COVID-19 tracking","publication_year":2021,"publication_date":"2021-01-20","ids":{"openalex":"https://openalex.org/W3109627689","doi":"https://doi.org/10.1186/s13040-021-00233-2","mag":"3109627689","pmid":"https://pubmed.ncbi.nlm.nih.gov/33472672"},"language":"en","primary_location":{"id":"doi:10.1186/s13040-021-00233-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-021-00233-2","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-021-00233-2","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-021-00233-2","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065802788","display_name":"Ye Emma Zohner","orcid":"https://orcid.org/0000-0003-1362-3445"},"institutions":[{"id":"https://openalex.org/I74775410","display_name":"Rice University","ror":"https://ror.org/008zs3103","country_code":"US","type":"education","lineage":["https://openalex.org/I74775410"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ye Emma Zohner","raw_affiliation_strings":["Department of Statistics, Rice University, 6100 Main Street, Houston, TX, 77005, USA. emma.zohner@rice.edu","Department of Statistics, Rice University, 6100 Main Street, Houston, TX, 77005, USA"],"raw_orcid":"https://orcid.org/0000-0003-1362-3445","affiliations":[{"raw_affiliation_string":"Department of Statistics, Rice University, 6100 Main Street, Houston, TX, 77005, USA. emma.zohner@rice.edu","institution_ids":["https://openalex.org/I74775410"]},{"raw_affiliation_string":"Department of Statistics, Rice University, 6100 Main Street, Houston, TX, 77005, USA","institution_ids":["https://openalex.org/I74775410"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5001295453","display_name":"Jeffrey S. Morris","orcid":"https://orcid.org/0000-0002-8520-6088"},"institutions":[{"id":"https://openalex.org/I79576946","display_name":"University of Pennsylvania","ror":"https://ror.org/00b30xv10","country_code":"US","type":"education","lineage":["https://openalex.org/I79576946"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeffrey S. Morris","raw_affiliation_strings":["Department of Biostatistics, Epidemiology and Informatics, Perelman School of Medicine, University of Pennsylvania, 600 Blockley Hall, 423 Guardian Drive, Philadelphia, PA, 19104, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biostatistics, Epidemiology and Informatics, Perelman School of Medicine, University of Pennsylvania, 600 Blockley Hall, 423 Guardian Drive, Philadelphia, PA, 19104, USA","institution_ids":["https://openalex.org/I79576946"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5065802788"],"corresponding_institution_ids":["https://openalex.org/I74775410"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.2777,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.78441665,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":"14","issue":"1","first_page":"4","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10410","display_name":"COVID-19 epidemiological studies","score":0.8708000183105469,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10410","display_name":"COVID-19 epidemiological studies","score":0.8708000183105469,"subfield":{"id":"https://openalex.org/subfields/2611","display_name":"Modeling and Simulation"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12943","display_name":"COVID-19 Digital Contact Tracing","score":0.01640000008046627,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13398","display_name":"Data Analysis with R","score":0.015399999916553497,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/coronavirus-disease-2019","display_name":"Coronavirus disease 2019 (COVID-19)","score":0.6899267435073853},{"id":"https://openalex.org/keywords/timeline","display_name":"Timeline","score":0.637504518032074},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6171023845672607},{"id":"https://openalex.org/keywords/pandemic","display_name":"Pandemic","score":0.5589708089828491},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.5079055428504944},{"id":"https://openalex.org/keywords/per-capita","display_name":"Per capita","score":0.43918517231941223},{"id":"https://openalex.org/keywords/severe-acute-respiratory-syndrome-coronavirus-2","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","score":0.4176810681819916},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4082859754562378},{"id":"https://openalex.org/keywords/econometrics","display_name":"Econometrics","score":0.3333092927932739},{"id":"https://openalex.org/keywords/infectious-disease","display_name":"Infectious disease (medical specialty)","score":0.19390365481376648},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.19249755144119263},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.16256731748580933},{"id":"https://openalex.org/keywords/environmental-health","display_name":"Environmental health","score":0.14249658584594727},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.09979811310768127},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.09732142090797424}],"concepts":[{"id":"https://openalex.org/C3008058167","wikidata":"https://www.wikidata.org/wiki/Q84263196","display_name":"Coronavirus disease 2019 (COVID-19)","level":4,"score":0.6899267435073853},{"id":"https://openalex.org/C4438859","wikidata":"https://www.wikidata.org/wiki/Q186117","display_name":"Timeline","level":2,"score":0.637504518032074},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6171023845672607},{"id":"https://openalex.org/C89623803","wikidata":"https://www.wikidata.org/wiki/Q12184","display_name":"Pandemic","level":5,"score":0.5589708089828491},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.5079055428504944},{"id":"https://openalex.org/C127598652","wikidata":"https://www.wikidata.org/wiki/Q558635","display_name":"Per capita","level":3,"score":0.43918517231941223},{"id":"https://openalex.org/C3007834351","wikidata":"https://www.wikidata.org/wiki/Q82069695","display_name":"Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)","level":5,"score":0.4176810681819916},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4082859754562378},{"id":"https://openalex.org/C149782125","wikidata":"https://www.wikidata.org/wiki/Q160039","display_name":"Econometrics","level":1,"score":0.3333092927932739},{"id":"https://openalex.org/C524204448","wikidata":"https://www.wikidata.org/wiki/Q788926","display_name":"Infectious disease (medical specialty)","level":3,"score":0.19390365481376648},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.19249755144119263},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.16256731748580933},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.14249658584594727},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.09979811310768127},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.09732142090797424},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/s13040-021-00233-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-021-00233-2","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-021-00233-2","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},{"id":"pmid:33472672","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33472672","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData mining","raw_type":null},{"id":"pmh:oai:doaj.org/article:94118e523d4044b287f30f59618baf13","is_oa":true,"landing_page_url":"https://doaj.org/article/94118e523d4044b287f30f59618baf13","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Mining, Vol 14, Iss 1, Pp 1-15 (2021)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7816158","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7816158","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Min","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13040-021-00233-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-021-00233-2","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-021-00233-2","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.7699999809265137,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3109627689.pdf","grobid_xml":"https://content.openalex.org/works/W3109627689.grobid-xml"},"referenced_works_count":4,"referenced_works":["https://openalex.org/W3010233963","https://openalex.org/W3012690941","https://openalex.org/W3015353547","https://openalex.org/W3031525229"],"related_works":["https://openalex.org/W1858249912","https://openalex.org/W2114034199","https://openalex.org/W2317428717","https://openalex.org/W2734259032","https://openalex.org/W4385261515","https://openalex.org/W3094038556","https://openalex.org/W4296345146","https://openalex.org/W2014772881","https://openalex.org/W4254228154","https://openalex.org/W2406257283"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,228],"COVID-19":[2,177,244],"pandemic":[3,245,277],"has":[4],"caused":[5],"major":[6],"health":[7],"and":[8,35,42,50,58,69,74,130,151,173,193,225,239,252,279,289],"socio-economic":[9],"disruptions":[10],"worldwide.":[11,253],"Accurate":[12],"investigation":[13],"of":[14,79,83,89,146],"emerging":[15],"data":[16,238],"is":[17,159,231],"crucial":[18],"to":[19,47,122,141,176,199,236,242,273],"inform":[20],"policy":[21],"makers":[22],"as":[23,31,99,101],"they":[24],"construct":[25],"viral":[26,220],"mitigation":[27,149],"strategies.":[28],"Complications":[29],"such":[30],"variable":[32],"testing":[33],"rates":[34],"time":[36,125,282],"lags":[37],"in":[38,127,190,195,222,248,269],"counting":[39],"cases,":[40],"hospitalizations":[41],"deaths":[43,174],"make":[44],"it":[45],"challenging":[46],"accurately":[48],"track":[49],"identify":[51],"true":[52],"infectious":[53],"surges":[54],"from":[55,106],"available":[56,113],"data,":[57,81],"requires":[59],"a":[60,77,111,139,160,166,232,258],"multi-modal":[61],"approach":[62],"that":[63,118,164],"simultaneously":[64,123],"considers":[65],"testing,":[66,170],"incidence,":[67,171],"hospitalizations,":[68,172],"deaths.":[70],"Although":[71],"many":[72],"websites":[73],"applications":[75],"report":[76],"subset":[78],"these":[80,97,128],"none":[82],"them":[84,137],"provide":[85],"graphical":[86],"displays":[87],"capable":[88],"comparing":[90],"different":[91,148,284],"states":[92,133,189],"or":[93,134],"countries":[94,194],"on":[95],"all":[96],"measures":[98,129],"well":[100],"various":[102,132,155,180,219],"useful":[103,202],"quantities":[104],"derived":[105,181],"them.":[107],"Here":[108],"we":[109],"introduce":[110],"freely":[112],"dynamic":[114],"representation":[115],"tool,":[116],"COVID-TRACK,":[117],"allows":[119],"the":[120,143,147,186,191,196,223,243,249,270,276,287,290],"user":[121],"assess":[124],"trends":[126,221,240,262],"compare":[131,237],"countries,":[135],"equipping":[136],"with":[138,179,201],"tool":[140,235,256],"investigate":[142],"potential":[144],"effects":[145],"strategies":[150],"timelines":[152],"used":[153],"by":[154,217],"jurisdictions.":[156],"FINDINGS:":[157],"COVID-TRACK":[158,229],"Python":[161],"based":[162],"web-application":[163,230],"provides":[165,257],"platform":[167,260],"for":[168],"tracking":[169,255],"related":[175,241],"along":[178],"quantities.":[182],"Our":[183,254],"application":[184],"makes":[185],"comparison":[187],"across":[188,246,266],"USA":[192,224,288],"world":[197],"easy":[198],"explore,":[200],"transformation":[203],"options":[204],"including":[205],"per":[206],"capita,":[207],"log":[208],"scale,":[209],"and/or":[210],"moving":[211],"averages.":[212],"We":[213],"illustrate":[214],"its":[215],"use":[216],"assessing":[218],"Europe.":[226],"CONCLUSION:":[227],"user-friendly":[233],"analytical":[234],"areas":[247,268],"United":[250],"States":[251],"unique":[259],"where":[261],"can":[263],"be":[264],"monitored":[265],"geographical":[267],"coming":[271],"months":[272],"watch":[274],"how":[275],"waxes":[278],"wanes":[280],"over":[281],"at":[283],"locations":[285],"around":[286],"globe.":[291]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":4}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}