{"id":"https://openalex.org/W2985576527","doi":"https://doi.org/10.1186/s13040-019-0209-9","title":"SEQdata-BEACON: a comprehensive database of sequencing performance and statistical tools for performance evaluation and yield simulation in BGISEQ-500","display_name":"SEQdata-BEACON: a comprehensive database of sequencing performance and statistical tools for performance evaluation and yield simulation in BGISEQ-500","publication_year":2019,"publication_date":"2019-11-15","ids":{"openalex":"https://openalex.org/W2985576527","doi":"https://doi.org/10.1186/s13040-019-0209-9","mag":"2985576527","pmid":"https://pubmed.ncbi.nlm.nih.gov/31807141"},"language":"en","primary_location":{"id":"doi:10.1186/s13040-019-0209-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-019-0209-9","pdf_url":"https://biodatamining.biomedcentral.com/track/pdf/10.1186/s13040-019-0209-9","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://biodatamining.biomedcentral.com/track/pdf/10.1186/s13040-019-0209-9","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005746640","display_name":"Yanqiu Zhou","orcid":"https://orcid.org/0000-0002-8462-9177"},"institutions":[{"id":"https://openalex.org/I4210099912","display_name":"Wuhan Science and Technology Bureau","ror":"https://ror.org/016s74507","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099912"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yanqiu Zhou","raw_affiliation_strings":["BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","institution_ids":["https://openalex.org/I4210099912"]},{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100322216","display_name":"Chen Liu","orcid":"https://orcid.org/0009-0003-0430-6146"},"institutions":[{"id":"https://openalex.org/I4210099912","display_name":"Wuhan Science and Technology Bureau","ror":"https://ror.org/016s74507","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099912"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chen Liu","raw_affiliation_strings":["BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","institution_ids":["https://openalex.org/I4210099912"]},{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074405221","display_name":"Rongfang Zhou","orcid":null},"institutions":[{"id":"https://openalex.org/I4210099912","display_name":"Wuhan Science and Technology Bureau","ror":"https://ror.org/016s74507","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099912"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rongfang Zhou","raw_affiliation_strings":["BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","institution_ids":["https://openalex.org/I4210099912"]},{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064952558","display_name":"Anzhi Lu","orcid":null},"institutions":[{"id":"https://openalex.org/I4210099912","display_name":"Wuhan Science and Technology Bureau","ror":"https://ror.org/016s74507","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099912"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Anzhi Lu","raw_affiliation_strings":["BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","institution_ids":["https://openalex.org/I4210099912"]},{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100432851","display_name":"Biao Huang","orcid":"https://orcid.org/0000-0001-9082-2216"},"institutions":[{"id":"https://openalex.org/I4210099912","display_name":"Wuhan Science and Technology Bureau","ror":"https://ror.org/016s74507","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099912"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Biao Huang","raw_affiliation_strings":["BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","institution_ids":["https://openalex.org/I4210099912"]},{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100642387","display_name":"Liling Liu","orcid":"https://orcid.org/0000-0001-7741-8200"},"institutions":[{"id":"https://openalex.org/I4210099912","display_name":"Wuhan Science and Technology Bureau","ror":"https://ror.org/016s74507","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099912"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Liling Liu","raw_affiliation_strings":["BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","institution_ids":["https://openalex.org/I4210099912"]},{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100411137","display_name":"Ling Chen","orcid":"https://orcid.org/0000-0003-1485-1626"},"institutions":[{"id":"https://openalex.org/I4210099912","display_name":"Wuhan Science and Technology Bureau","ror":"https://ror.org/016s74507","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099912"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ling Chen","raw_affiliation_strings":["BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","institution_ids":["https://openalex.org/I4210099912"]},{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087857547","display_name":"Bei Luo","orcid":"https://orcid.org/0000-0001-8393-6506"},"institutions":[{"id":"https://openalex.org/I4210099912","display_name":"Wuhan Science and Technology Bureau","ror":"https://ror.org/016s74507","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099912"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bei Luo","raw_affiliation_strings":["BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","institution_ids":["https://openalex.org/I4210099912"]},{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102925501","display_name":"Jin Huang","orcid":"https://orcid.org/0000-0002-9216-3688"},"institutions":[{"id":"https://openalex.org/I4210099912","display_name":"Wuhan Science and Technology Bureau","ror":"https://ror.org/016s74507","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099912"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jin Huang","raw_affiliation_strings":["BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","institution_ids":["https://openalex.org/I4210099912"]},{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072933853","display_name":"Zhijian Tian","orcid":null},"institutions":[{"id":"https://openalex.org/I4210099912","display_name":"Wuhan Science and Technology Bureau","ror":"https://ror.org/016s74507","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210099912"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhijian Tian","raw_affiliation_strings":["BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074 China","institution_ids":["https://openalex.org/I4210099912"]},{"raw_affiliation_string":"BGI-Wuhan Clinical Laboratories, Building B2, No.666 Gaoxin Road, Wuhan East lake Hi-tech Development zone, Wuhan, 430074, China","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5005746640"],"corresponding_institution_ids":["https://openalex.org/I4210099912"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.4394,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.83634551,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"12","issue":"1","first_page":"21","last_page":"21"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.8251000046730042,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.8251000046730042,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.07000000029802322,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.012900000438094139,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/barcode","display_name":"Barcode","score":0.7590004205703735},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6676739454269409},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5152833461761475},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.503417432308197},{"id":"https://openalex.org/keywords/throughput","display_name":"Throughput","score":0.4683460593223572},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.4625944495201111},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4608919024467468},{"id":"https://openalex.org/keywords/wireless","display_name":"Wireless","score":0.11531287431716919},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08653056621551514}],"concepts":[{"id":"https://openalex.org/C2776841711","wikidata":"https://www.wikidata.org/wiki/Q856","display_name":"Barcode","level":2,"score":0.7590004205703735},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6676739454269409},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5152833461761475},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.503417432308197},{"id":"https://openalex.org/C157764524","wikidata":"https://www.wikidata.org/wiki/Q1383412","display_name":"Throughput","level":3,"score":0.4683460593223572},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.4625944495201111},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4608919024467468},{"id":"https://openalex.org/C555944384","wikidata":"https://www.wikidata.org/wiki/Q249","display_name":"Wireless","level":2,"score":0.11531287431716919},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08653056621551514},{"id":"https://openalex.org/C76155785","wikidata":"https://www.wikidata.org/wiki/Q418","display_name":"Telecommunications","level":1,"score":0.0},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/s13040-019-0209-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-019-0209-9","pdf_url":"https://biodatamining.biomedcentral.com/track/pdf/10.1186/s13040-019-0209-9","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},{"id":"pmid:31807141","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31807141","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData mining","raw_type":null},{"id":"pmh:oai:doaj.org/article:a9241efbdc214c4292f579682abf5ec2","is_oa":true,"landing_page_url":"https://doaj.org/article/a9241efbdc214c4292f579682abf5ec2","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Mining, Vol 12, Iss 1, Pp 1-14 (2019)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:6857306","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6857306","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Min","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13040-019-0209-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-019-0209-9","pdf_url":"https://biodatamining.biomedcentral.com/track/pdf/10.1186/s13040-019-0209-9","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.49000000953674316}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2985576527.pdf","grobid_xml":"https://content.openalex.org/works/W2985576527.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W1973950074","https://openalex.org/W2341879728","https://openalex.org/W2396849069","https://openalex.org/W2398060177","https://openalex.org/W2468965472","https://openalex.org/W2555332535","https://openalex.org/W2604685034","https://openalex.org/W2611922188","https://openalex.org/W2740447116","https://openalex.org/W2776197744","https://openalex.org/W2783719724","https://openalex.org/W2793054360","https://openalex.org/W2796630214","https://openalex.org/W2803375800","https://openalex.org/W2886228936","https://openalex.org/W2886563621","https://openalex.org/W2897929295","https://openalex.org/W2899035229","https://openalex.org/W2914329079","https://openalex.org/W2922119816","https://openalex.org/W2927036568","https://openalex.org/W2936052783","https://openalex.org/W2949796709","https://openalex.org/W2951343553","https://openalex.org/W2952680120","https://openalex.org/W3011642187","https://openalex.org/W3024314143"],"related_works":["https://openalex.org/W2899084033","https://openalex.org/W2256570403","https://openalex.org/W2074156223","https://openalex.org/W2103246366","https://openalex.org/W4391927655","https://openalex.org/W2901653204","https://openalex.org/W1980504858","https://openalex.org/W2102526470","https://openalex.org/W2613659923","https://openalex.org/W4378447789"],"abstract_inverted_index":{"Abstract":[0],"Background":[1],"The":[2,166,241],"sequencing":[3,37,49,53,58,93,101,164,186,298],"platform":[4],"BGISEQ-500":[5,83,290],"is":[6,44],"based":[7],"on":[8,308],"DNBSEQ":[9,295],"technology":[10],"and":[11,29,39,55,108,144,163,176,224,232,238,274,281,300],"provides":[12],"high":[13],"throughput":[14],"with":[15,245],"low":[16],"costs.":[17],"This":[18],"sequencer":[19],"has":[20],"been":[21],"widely":[22],"used":[23,90],"in":[24,76,85,97,132,214,259],"various":[25],"areas":[26],"of":[27,35,41,81,168,184,191,194,218,222,229,263],"scientific":[28],"clinical":[30],"research.":[31],"A":[32,79],"better":[33],"understanding":[34],"the":[36,48,72,86,133,169,185,189,203,207,215,219,225,230,246,255],"process":[38],"performance":[40,74,94],"this":[42],"system":[43],"essential":[45],"for":[46,179,289],"stabilizing":[47],"process,":[50],"accurately":[51],"interpreting":[52],"results":[54,266],"efficiently":[56],"solving":[57],"problems.":[59],"To":[60],"address":[61],"these":[62],"concerns,":[63],"a":[64,113,148,192,197,285],"comprehensive":[65],"database,":[66],"SEQdata-BEACON,":[67],"was":[68,111,243,272],"constructed":[69],"to":[70,91,125,253,292],"accumulate":[71],"run":[73,244,302],"data":[75,190],"BGISEQ-500.":[77],"Results":[78],"total":[80,193],"60":[82],"instruments":[84],"BGI-Wuhan":[87],"lab":[88],"were":[89,106,130,154,236],"collect":[92],"data.":[95],"Lanes":[96],"paired-end":[98],"100":[99],"(PE100)":[100],"using":[102],"10":[103],"bp":[104],"barcode":[105],"chosen,":[107],"each":[109],"lane":[110],"assigned":[112],"unique":[114],"entry":[115],"number":[116,120],"as":[117],"its":[118],"identification":[119],"(ID).":[121],"From":[122],"November":[123],"2018":[124],"April":[126],"2019,":[127],"2236":[128],"entries":[129],"recorded":[131],"database":[134],"containing":[135],"65":[136],"metrics":[137,153,170],"about":[138,174],"sample,":[139],"yield,":[140,256],"quality,":[141],"machine":[142,161],"state":[143,162],"supplies":[145],"information.":[146],"Using":[147,188],"correlation":[149],"matrix,":[150],"52":[151],"numerical":[152],"clustered":[155],"into":[156],"three":[157],"groups":[158],"signifying":[159],"yield-quality,":[160],"calibration.":[165],"distributions":[167],"also":[171],"delivered":[172],"information":[173],"patterns":[175],"rendered":[177],"clues":[178],"further":[180],"explanation":[181],"or":[182],"analysis":[183],"process.":[187],"200":[195],"cycles,":[196],"linear":[198],"regression":[199],"model":[200,242,271],"well":[201],"simulated":[202],"final":[204,209],"outputs.":[205],"Moreover,":[206],"predicted":[208],"yield":[210],"could":[211],"be":[212],"provided":[213],"15th":[216,233],"cycle":[217,234],"early":[220],"stage":[221],"sequencing,":[223],"corresponding":[226],"R":[227,261],"2":[228,262],"200th":[231],"models":[235],"0.97":[237],"0.81,":[239],"respectively.":[240],"test":[247],"sets":[248],"obtained":[249],"from":[250],"May":[251],"2019":[252],"predict":[254],"which":[257],"resulted":[258],"an":[260],"0.96.":[264],"These":[265,304],"indicate":[267],"that":[268],"our":[269,309],"simulation":[270],"reliable":[273],"effective.":[275],"Conclusions":[276],"Data":[277],"sources,":[278],"statistical":[279],"findings":[280],"application":[282],"tools":[283],"provide":[284],"constantly":[286],"updated":[287],"reference":[288],"users":[291],"comprehensively":[293],"understand":[294],"technology,":[296],"solve":[297],"problems":[299],"optimize":[301],"performance.":[303],"resources":[305],"are":[306],"available":[307],"website":[310],"http://seqBEACON.genomics.cn:443/home.html":[311],".":[312]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":5}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
