{"id":"https://openalex.org/W2885533875","doi":"https://doi.org/10.1186/s13040-018-0176-6","title":"Protein folding prediction in the HP model using ions motion optimization with a greedy algorithm","display_name":"Protein folding prediction in the HP model using ions motion optimization with a greedy algorithm","publication_year":2018,"publication_date":"2018-08-08","ids":{"openalex":"https://openalex.org/W2885533875","doi":"https://doi.org/10.1186/s13040-018-0176-6","mag":"2885533875","pmid":"https://pubmed.ncbi.nlm.nih.gov/30116298"},"language":"en","primary_location":{"id":"doi:10.1186/s13040-018-0176-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-018-0176-6","pdf_url":"https://biodatamining.biomedcentral.com/track/pdf/10.1186/s13040-018-0176-6","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://biodatamining.biomedcentral.com/track/pdf/10.1186/s13040-018-0176-6","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065832977","display_name":"Cheng\u2010Hong Yang","orcid":"https://orcid.org/0000-0002-2741-0072"},"institutions":[{"id":"https://openalex.org/I118692353","display_name":"University of Science and Technology","ror":"https://ror.org/05bj7sh33","country_code":"YE","type":"education","lineage":["https://openalex.org/I118692353"]},{"id":"https://openalex.org/I152743029","display_name":"Kaohsiung Medical University","ror":"https://ror.org/03gk81f96","country_code":"TW","type":"education","lineage":["https://openalex.org/I152743029"]},{"id":"https://openalex.org/I4387154394","display_name":"National Kaohsiung University of Science and Technology","ror":"https://ror.org/00hfj7g70","country_code":null,"type":"education","lineage":["https://openalex.org/I4387154394"]}],"countries":["TW","YE"],"is_corresponding":false,"raw_author_name":"Cheng-Hong Yang","raw_affiliation_strings":["1Department of Electronic Engineering, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan","2Graduate Institute of Clinical Medicine, Kaohsiung Medical University, Kaohsiung, Taiwan","Department of Electronic Engineering, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan","Graduate Institute of Clinical Medicine, Kaohsiung Medical University, Kaohsiung, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1Department of Electronic Engineering, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I118692353","https://openalex.org/I4387154394"]},{"raw_affiliation_string":"2Graduate Institute of Clinical Medicine, Kaohsiung Medical University, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I152743029"]},{"raw_affiliation_string":"Department of Electronic Engineering, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I4387154394"]},{"raw_affiliation_string":"Graduate Institute of Clinical Medicine, Kaohsiung Medical University, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I152743029"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038475646","display_name":"Kuo\u2010Chuan Wu","orcid":"https://orcid.org/0000-0003-3566-4379"},"institutions":[{"id":"https://openalex.org/I118692353","display_name":"University of Science and Technology","ror":"https://ror.org/05bj7sh33","country_code":"YE","type":"education","lineage":["https://openalex.org/I118692353"]},{"id":"https://openalex.org/I4387154394","display_name":"National Kaohsiung University of Science and Technology","ror":"https://ror.org/00hfj7g70","country_code":null,"type":"education","lineage":["https://openalex.org/I4387154394"]}],"countries":["YE"],"is_corresponding":false,"raw_author_name":"Kuo-Chuan Wu","raw_affiliation_strings":["1Department of Electronic Engineering, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan","3Department of Computer Science and Information Engineering, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan","Department of Electronic Engineering, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1Department of Electronic Engineering, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I118692353","https://openalex.org/I4387154394"]},{"raw_affiliation_string":"3Department of Computer Science and Information Engineering, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I118692353","https://openalex.org/I4387154394"]},{"raw_affiliation_string":"Department of Electronic Engineering, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I4387154394"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103744281","display_name":"Yu\u2010Shiun Lin","orcid":null},"institutions":[{"id":"https://openalex.org/I118692353","display_name":"University of Science and Technology","ror":"https://ror.org/05bj7sh33","country_code":"YE","type":"education","lineage":["https://openalex.org/I118692353"]},{"id":"https://openalex.org/I4387154394","display_name":"National Kaohsiung University of Science and Technology","ror":"https://ror.org/00hfj7g70","country_code":null,"type":"education","lineage":["https://openalex.org/I4387154394"]}],"countries":["YE"],"is_corresponding":false,"raw_author_name":"Yu-Shiun Lin","raw_affiliation_strings":["1Department of Electronic Engineering, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan","Department of Electronic Engineering, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"1Department of Electronic Engineering, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I118692353","https://openalex.org/I4387154394"]},{"raw_affiliation_string":"Department of Electronic Engineering, National Kaohsiung University of Science and Technology, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I4387154394"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034774683","display_name":"Li\u2010Yeh Chuang","orcid":"https://orcid.org/0000-0002-9817-5102"},"institutions":[{"id":"https://openalex.org/I98298690","display_name":"I-Shou University","ror":"https://ror.org/04d7e4m76","country_code":"TW","type":"education","lineage":["https://openalex.org/I98298690"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Li-Yeh Chuang","raw_affiliation_strings":["4Department of Chemical Engineering & Institute of Biotechnology and Chemical Engineering, I-Shou University, Kaohsiung, Taiwan","Department of Chemical Engineering & Institute of Biotechnology and Chemical Engineering, I-Shou University, Kaohsiung, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"4Department of Chemical Engineering & Institute of Biotechnology and Chemical Engineering, I-Shou University, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I98298690"]},{"raw_affiliation_string":"Department of Chemical Engineering & Institute of Biotechnology and Chemical Engineering, I-Shou University, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I98298690"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060755845","display_name":"Hsueh\u2010Wei Chang","orcid":"https://orcid.org/0000-0003-0068-2366"},"institutions":[{"id":"https://openalex.org/I142974352","display_name":"National Sun Yat-sen University","ror":"https://ror.org/00mjawt10","country_code":"TW","type":"education","lineage":["https://openalex.org/I142974352"]},{"id":"https://openalex.org/I152743029","display_name":"Kaohsiung Medical University","ror":"https://ror.org/03gk81f96","country_code":"TW","type":"education","lineage":["https://openalex.org/I152743029"]},{"id":"https://openalex.org/I2802587341","display_name":"Kaohsiung Medical University Chung-Ho Memorial Hospital","ror":"https://ror.org/02xmkec90","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I2802587341"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Hsueh-Wei Chang","raw_affiliation_strings":["5Department of Biomedical Science and Environmental Biology, Kaohsiung Medical University, Kaohsiung, Taiwan","6Institute of Medical Science and Technology, National Sun Yat-sen University, Kaohsiung, Taiwan","7Department of Medical Research, Kaohsiung Medical University Hospital, Kaohsiung, Taiwan","Department of Medical Research, Kaohsiung Medical University Hospital, Kaohsiung, Taiwan","Department of Biomedical Science and Environmental Biology, Kaohsiung Medical University, Kaohsiung, Taiwan","Institute of Medical Science and Technology, National Sun Yat-sen University, Kaohsiung, Taiwan"],"raw_orcid":"https://orcid.org/0000-0003-0068-2366","affiliations":[{"raw_affiliation_string":"5Department of Biomedical Science and Environmental Biology, Kaohsiung Medical University, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I152743029"]},{"raw_affiliation_string":"6Institute of Medical Science and Technology, National Sun Yat-sen University, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I142974352"]},{"raw_affiliation_string":"7Department of Medical Research, Kaohsiung Medical University Hospital, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I152743029"]},{"raw_affiliation_string":"Department of Medical Research, Kaohsiung Medical University Hospital, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I152743029","https://openalex.org/I2802587341"]},{"raw_affiliation_string":"Department of Biomedical Science and Environmental Biology, Kaohsiung Medical University, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I152743029"]},{"raw_affiliation_string":"Institute of Medical Science and Technology, National Sun Yat-sen University, Kaohsiung, Taiwan","institution_ids":["https://openalex.org/I142974352"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5034774683","https://openalex.org/A5060755845"],"corresponding_institution_ids":["https://openalex.org/I142974352","https://openalex.org/I152743029","https://openalex.org/I2802587341","https://openalex.org/I98298690"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.2062,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":{"value":0.79090433,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"11","issue":"1","first_page":"17","last_page":"17"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.7283999919891357,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.7283999919891357,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.11869999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10100","display_name":"Metaheuristic Optimization Algorithms Research","score":0.021800000220537186,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6403405070304871},{"id":"https://openalex.org/keywords/protein-structure-prediction","display_name":"Protein structure prediction","score":0.6391806602478027},{"id":"https://openalex.org/keywords/greedy-algorithm","display_name":"Greedy algorithm","score":0.6137188673019409},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.5944420695304871},{"id":"https://openalex.org/keywords/folding","display_name":"Folding (DSP implementation)","score":0.592366099357605},{"id":"https://openalex.org/keywords/protein-folding","display_name":"Protein folding","score":0.46398213505744934},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.42448094487190247},{"id":"https://openalex.org/keywords/mathematical-optimization","display_name":"Mathematical optimization","score":0.3348621428012848},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.2909698486328125},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.20905086398124695},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.1261369287967682},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.1132546067237854}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6403405070304871},{"id":"https://openalex.org/C18051474","wikidata":"https://www.wikidata.org/wiki/Q899656","display_name":"Protein structure prediction","level":3,"score":0.6391806602478027},{"id":"https://openalex.org/C51823790","wikidata":"https://www.wikidata.org/wiki/Q504353","display_name":"Greedy algorithm","level":2,"score":0.6137188673019409},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.5944420695304871},{"id":"https://openalex.org/C2776545253","wikidata":"https://www.wikidata.org/wiki/Q5464292","display_name":"Folding (DSP implementation)","level":2,"score":0.592366099357605},{"id":"https://openalex.org/C204328495","wikidata":"https://www.wikidata.org/wiki/Q847556","display_name":"Protein folding","level":2,"score":0.46398213505744934},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.42448094487190247},{"id":"https://openalex.org/C126255220","wikidata":"https://www.wikidata.org/wiki/Q141495","display_name":"Mathematical optimization","level":1,"score":0.3348621428012848},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.2909698486328125},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.20905086398124695},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.1261369287967682},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.1132546067237854},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/s13040-018-0176-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-018-0176-6","pdf_url":"https://biodatamining.biomedcentral.com/track/pdf/10.1186/s13040-018-0176-6","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},{"id":"pmid:30116298","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30116298","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData mining","raw_type":null},{"id":"pmh:oai:doaj.org/article:ca423600c24e45b9bb3b98eda085cd05","is_oa":true,"landing_page_url":"https://doaj.org/article/ca423600c24e45b9bb3b98eda085cd05","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Mining, Vol 11, Iss 1, Pp 1-14 (2018)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:5040008","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6083565","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13040-018-0176-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-018-0176-6","pdf_url":"https://biodatamining.biomedcentral.com/track/pdf/10.1186/s13040-018-0176-6","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1052468712","display_name":null,"funder_award_id":"MOST 105-","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G1192399272","display_name":null,"funder_award_id":"MOST 106-","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G3403650167","display_name":null,"funder_award_id":"MOST 102-2221-E-151-024-MY3","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G3468423577","display_name":null,"funder_award_id":"MOST 105","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G3832922736","display_name":null,"funder_award_id":"MOST 102-2221-E-151-024-MY3","funder_id":"https://openalex.org/F4320310848","funder_display_name":"Ministry of Health and Welfare"},{"id":"https://openalex.org/G4162621379","display_name":null,"funder_award_id":"MOST 107","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G4202958531","display_name":null,"funder_award_id":"MOST 107-","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G4293688279","display_name":null,"funder_award_id":"MOHW107-TDU-B-212-114016","funder_id":"https://openalex.org/F4320310848","funder_display_name":"Ministry of Health and Welfare"},{"id":"https://openalex.org/G522915841","display_name":null,"funder_award_id":"102-2221","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G5563719332","display_name":null,"funder_award_id":"106-2221-E-","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G6361412390","display_name":null,"funder_award_id":"106-2221-E-992-327-MY2","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G6863194314","display_name":null,"funder_award_id":"MOST 102-","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G8160956625","display_name":null,"funder_award_id":"MOST 107-2320-B-037-016","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G939887807","display_name":null,"funder_award_id":"MOST 106","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"}],"funders":[{"id":"https://openalex.org/F4320310118","display_name":"National Sun Yat-sen University","ror":"https://ror.org/00mjawt10"},{"id":"https://openalex.org/F4320310848","display_name":"Ministry of Health and Welfare","ror":"https://ror.org/024w0ge69"},{"id":"https://openalex.org/F4320321160","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71"},{"id":"https://openalex.org/F4320322795","display_name":"Ministry of Science and Technology, Taiwan","ror":"https://ror.org/02kv4zf79"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2885533875.pdf","grobid_xml":"https://content.openalex.org/works/W2885533875.grobid-xml"},"referenced_works_count":40,"referenced_works":["https://openalex.org/W1481729573","https://openalex.org/W1509531050","https://openalex.org/W1564001275","https://openalex.org/W1586764248","https://openalex.org/W1636965069","https://openalex.org/W1969759235","https://openalex.org/W1971115336","https://openalex.org/W1980093164","https://openalex.org/W1987134040","https://openalex.org/W2012061817","https://openalex.org/W2017538986","https://openalex.org/W2017972926","https://openalex.org/W2030666923","https://openalex.org/W2045777307","https://openalex.org/W2045947927","https://openalex.org/W2049954948","https://openalex.org/W2052963427","https://openalex.org/W2055666215","https://openalex.org/W2080382112","https://openalex.org/W2081777459","https://openalex.org/W2085177807","https://openalex.org/W2108311787","https://openalex.org/W2126677834","https://openalex.org/W2133458557","https://openalex.org/W2137509473","https://openalex.org/W2139415631","https://openalex.org/W2149866421","https://openalex.org/W2152195021","https://openalex.org/W2155201844","https://openalex.org/W2159296057","https://openalex.org/W2166299026","https://openalex.org/W2167656653","https://openalex.org/W2170994954","https://openalex.org/W2171283513","https://openalex.org/W2201713963","https://openalex.org/W2323927982","https://openalex.org/W2409271889","https://openalex.org/W2468024066","https://openalex.org/W2543580944","https://openalex.org/W2611927968"],"related_works":["https://openalex.org/W2260493136","https://openalex.org/W2113188411","https://openalex.org/W2389640906","https://openalex.org/W4312077400","https://openalex.org/W2976965029","https://openalex.org/W2382178265","https://openalex.org/W2055827177","https://openalex.org/W2072666835","https://openalex.org/W4248706500","https://openalex.org/W1999927713"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,112,124],"function":[2],"of":[3,108,114,138,183,187],"a":[4,82,87,142,174],"protein":[5,11,15,28,65,162,184],"is":[6],"determined":[7],"by":[8,120],"its":[9,101],"native":[10],"structure.":[12],"Among":[13],"many":[14],"prediction":[16,30,37,67,84,102,122,186],"methods,":[17],"the":[18,27,36,43,52,60,64,70,77,109,115,121,129,134,148,154,157,167],"Hydrophobic-Polar":[19],"(HP)":[20],"model,":[21],"an":[22,180],"ab":[23],"initio":[24],"method,":[25],"simplifies":[26],"folding":[29,66,163],"process":[31],"in":[32,86,100],"order":[33],"to":[34,59,91,131,147],"reduce":[35],"complexity.":[38],"RESULTS:":[39],"In":[40],"this":[41],"study,":[42],"ions":[44],"motion":[45],"optimization":[46],"(IMO)":[47],"algorithm":[48,54,150,176],"was":[49,118],"combined":[50,140],"with":[51,141,160,171],"greedy":[53,175],"(namely":[55],"IMOG)":[56],"and":[57,104,128,173,192],"implemented":[58],"HP":[61,88,168],"model":[62,169],"for":[63,106,156],"based":[68],"on":[69],"2D-triangular-lattice":[71],"model.":[72,89],"Prediction":[73],"results":[74],"showed":[75],"that":[76],"integration":[78],"method":[79,95,117],"IMOG":[80,151,178],"provided":[81],"better":[83],"efficiency":[85,113],"Compared":[90],"others,":[92],"our":[93],"proposed":[94,116],"turned":[96],"out":[97],"as":[98,177],"superior":[99],"ability":[103,130],"resilience":[105],"most":[107],"test":[110],"sequences.":[111],"verified":[119],"results.":[123],"global":[125],"search":[126,144,155],"capability":[127],"escape":[132],"from":[133],"local":[135,143],"best":[136,158],"solution":[137,159],"IMO":[139,172],"(greedy":[145],"algorithm)":[146],"new":[149],"greatly":[152],"improve":[153],"reliable":[161],"prediction.":[164],"CONCLUSION:":[165],"Overall,":[166],"integrated":[170],"provides":[179],"improved":[181],"way":[182],"structure":[185],"high":[188,190],"stability,":[189],"efficiency,":[191],"outstanding":[193],"performance.":[194]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":2}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
