{"id":"https://openalex.org/W2115977673","doi":"https://doi.org/10.1186/s13040-015-0041-9","title":"Visualisation of quadratic discriminant analysis and its application in exploration of microbial interactions","display_name":"Visualisation of quadratic discriminant analysis and its application in exploration of microbial interactions","publication_year":2015,"publication_date":"2015-02-24","ids":{"openalex":"https://openalex.org/W2115977673","doi":"https://doi.org/10.1186/s13040-015-0041-9","mag":"2115977673","pmid":"https://pubmed.ncbi.nlm.nih.gov/25798196"},"language":"en","primary_location":{"id":"doi:10.1186/s13040-015-0041-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-015-0041-9","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-015-0041-9","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-015-0041-9","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065864351","display_name":"Sugnet Gardner\u2010Lubbe","orcid":"https://orcid.org/0000-0003-2762-9944"},"institutions":[{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]}],"countries":["ZA"],"is_corresponding":true,"raw_author_name":"Sugnet Gardner-Lubbe","raw_affiliation_strings":["Department of Statistical Sciences, University of Cape Town, Rondebosch, 7701 Cape Town, South Africa","Department of Statistical Sciences, University of Cape Town, Cape Town, South Africa#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Statistical Sciences, University of Cape Town, Rondebosch, 7701 Cape Town, South Africa","institution_ids":["https://openalex.org/I157614274"]},{"raw_affiliation_string":"Department of Statistical Sciences, University of Cape Town, Cape Town, South Africa#TAB#","institution_ids":["https://openalex.org/I157614274"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5068669676","display_name":"Felix S. Dube","orcid":"https://orcid.org/0000-0003-2775-7786"},"institutions":[{"id":"https://openalex.org/I157614274","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79","country_code":"ZA","type":"education","lineage":["https://openalex.org/I157614274"]}],"countries":["ZA"],"is_corresponding":false,"raw_author_name":"Felix S Dube","raw_affiliation_strings":["Division of Medical Microbiology, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa","Division of Medical Microbiology, Faculty of Health Sciences University of Cape Town Cape Town South Africa"],"affiliations":[{"raw_affiliation_string":"Division of Medical Microbiology, Faculty of Health Sciences, University of Cape Town, Cape Town, South Africa","institution_ids":["https://openalex.org/I157614274"]},{"raw_affiliation_string":"Division of Medical Microbiology, Faculty of Health Sciences University of Cape Town Cape Town South Africa","institution_ids":["https://openalex.org/I157614274"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5065864351"],"corresponding_institution_ids":["https://openalex.org/I157614274"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.7416,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.70200202,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"8","issue":"1","first_page":"8","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10640","display_name":"Spectroscopy and Chemometric Analyses","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/1602","display_name":"Analytical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10640","display_name":"Spectroscopy and Chemometric Analyses","score":0.9886000156402588,"subfield":{"id":"https://openalex.org/subfields/1602","display_name":"Analytical Chemistry"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12114","display_name":"Sensory Analysis and Statistical Methods","score":0.9868000149726868,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biplot","display_name":"Biplot","score":0.8738129138946533},{"id":"https://openalex.org/keywords/covariance","display_name":"Covariance","score":0.7253570556640625},{"id":"https://openalex.org/keywords/discriminant","display_name":"Discriminant","score":0.6888833045959473},{"id":"https://openalex.org/keywords/linear-discriminant-analysis","display_name":"Linear discriminant analysis","score":0.6855133771896362},{"id":"https://openalex.org/keywords/quadratic-equation","display_name":"Quadratic equation","score":0.6535623073577881},{"id":"https://openalex.org/keywords/quadratic-classifier","display_name":"Quadratic classifier","score":0.6429585218429565},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.6308916807174683},{"id":"https://openalex.org/keywords/univariate","display_name":"Univariate","score":0.5965506434440613},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.5303186774253845},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.5023543834686279},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.49769046902656555},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4935845136642456},{"id":"https://openalex.org/keywords/multivariate-statistics","display_name":"Multivariate statistics","score":0.48569950461387634},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.4537534713745117},{"id":"https://openalex.org/keywords/transformation","display_name":"Transformation (genetics)","score":0.42243367433547974},{"id":"https://openalex.org/keywords/separation","display_name":"Separation (statistics)","score":0.4127400517463684},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4112226366996765},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15466326475143433}],"concepts":[{"id":"https://openalex.org/C118483189","wikidata":"https://www.wikidata.org/wiki/Q4915468","display_name":"Biplot","level":4,"score":0.8738129138946533},{"id":"https://openalex.org/C178650346","wikidata":"https://www.wikidata.org/wiki/Q201984","display_name":"Covariance","level":2,"score":0.7253570556640625},{"id":"https://openalex.org/C78397625","wikidata":"https://www.wikidata.org/wiki/Q192487","display_name":"Discriminant","level":2,"score":0.6888833045959473},{"id":"https://openalex.org/C69738355","wikidata":"https://www.wikidata.org/wiki/Q1228929","display_name":"Linear discriminant analysis","level":2,"score":0.6855133771896362},{"id":"https://openalex.org/C129844170","wikidata":"https://www.wikidata.org/wiki/Q41299","display_name":"Quadratic equation","level":2,"score":0.6535623073577881},{"id":"https://openalex.org/C52620605","wikidata":"https://www.wikidata.org/wiki/Q7268357","display_name":"Quadratic classifier","level":3,"score":0.6429585218429565},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.6308916807174683},{"id":"https://openalex.org/C199163554","wikidata":"https://www.wikidata.org/wiki/Q1681619","display_name":"Univariate","level":3,"score":0.5965506434440613},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.5303186774253845},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.5023543834686279},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.49769046902656555},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4935845136642456},{"id":"https://openalex.org/C161584116","wikidata":"https://www.wikidata.org/wiki/Q1952580","display_name":"Multivariate statistics","level":2,"score":0.48569950461387634},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.4537534713745117},{"id":"https://openalex.org/C204241405","wikidata":"https://www.wikidata.org/wiki/Q461499","display_name":"Transformation (genetics)","level":3,"score":0.42243367433547974},{"id":"https://openalex.org/C2776061190","wikidata":"https://www.wikidata.org/wiki/Q7451805","display_name":"Separation (statistics)","level":2,"score":0.4127400517463684},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4112226366996765},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15466326475143433},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/s13040-015-0041-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-015-0041-9","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-015-0041-9","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},{"id":"pmid:25798196","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25798196","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData mining","raw_type":null},{"id":"pmh:oai:europepmc.org:3331310","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4369096","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:localhost:11427/12626","is_oa":true,"landing_page_url":"http://hdl.handle.net/11427/12626","pdf_url":null,"source":{"id":"https://openalex.org/S4306402129","display_name":"Open University of Cape Town (University of Cape Town)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I157614274","host_organization_name":"University of Cape Town","host_organization_lineage":["https://openalex.org/I157614274"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1186/s13040-015-0041-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-015-0041-9","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-015-0041-9","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","score":0.7300000190734863,"display_name":"Reduced inequalities"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320671","display_name":"National Research Foundation","ror":"https://ror.org/05s0g1g46"},{"id":"https://openalex.org/F4320324164","display_name":"University of Cape Town","ror":"https://ror.org/03p74gp79"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2115977673.pdf","grobid_xml":"https://content.openalex.org/works/W2115977673.grobid-xml"},"referenced_works_count":9,"referenced_works":["https://openalex.org/W1997864634","https://openalex.org/W2001619934","https://openalex.org/W2052570068","https://openalex.org/W2071128523","https://openalex.org/W2074435153","https://openalex.org/W2276276221","https://openalex.org/W2488561715","https://openalex.org/W2613941763","https://openalex.org/W4246354968"],"related_works":["https://openalex.org/W2113454941","https://openalex.org/W2951122819","https://openalex.org/W4288315282","https://openalex.org/W2350751952","https://openalex.org/W2362114017","https://openalex.org/W1999647744","https://openalex.org/W2088711785","https://openalex.org/W4285246984","https://openalex.org/W2075660794","https://openalex.org/W1984080040"],"abstract_inverted_index":{"In":[0,27],"this":[1],"paper":[2],"an":[3],"alternative":[4],"method":[5],"is":[6,40],"proposed:":[7],"combining":[8],"the":[9,13,21,31,46],"different":[10,14],"transformations":[11],"for":[12],"groups":[15],"into":[16],"a":[17,38],"single":[18],"representation":[19],"of":[20],"sample":[22],"points":[23],"with":[24,35],"classification":[25],"regions.":[26],"order":[28],"to":[29],"associate":[30],"differences":[32],"in":[33],"variables":[34],"group":[36],"discrimination,":[37],"biplot":[39],"produced":[41],"which":[42],"include":[43],"information":[44],"on":[45],"variables,":[47],"samples":[48],"and":[49],"their":[50],"relationship.":[51]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
