{"id":"https://openalex.org/W2106634696","doi":"https://doi.org/10.1186/s13040-014-0036-y","title":"Linked vaccine adverse event data from VAERS for biomedical data analysis and longitudinal studies","display_name":"Linked vaccine adverse event data from VAERS for biomedical data analysis and longitudinal studies","publication_year":2014,"publication_date":"2014-12-01","ids":{"openalex":"https://openalex.org/W2106634696","doi":"https://doi.org/10.1186/s13040-014-0036-y","mag":"2106634696","pmid":"https://pubmed.ncbi.nlm.nih.gov/25699091"},"language":"en","primary_location":{"id":"doi:10.1186/s13040-014-0036-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-014-0036-y","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-014-0036-y","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-014-0036-y","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076058129","display_name":"Cui Tao","orcid":"https://orcid.org/0000-0002-4267-1924"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cui Tao","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX USA","School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX USA","institution_ids":["https://openalex.org/I919571938"]},{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009191509","display_name":"Puqiang Wu","orcid":null},"institutions":[{"id":"https://openalex.org/I135310074","display_name":"University of Wisconsin\u2013Madison","ror":"https://ror.org/01y2jtd41","country_code":"US","type":"education","lineage":["https://openalex.org/I135310074"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Puqiang Wu","raw_affiliation_strings":["University of Wisconsin-Madison, Madison, WI USA","University of Wisconsin-Madison, Madison, WI, USA"],"affiliations":[{"raw_affiliation_string":"University of Wisconsin-Madison, Madison, WI USA","institution_ids":["https://openalex.org/I135310074"]},{"raw_affiliation_string":"University of Wisconsin-Madison, Madison, WI, USA","institution_ids":["https://openalex.org/I135310074"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036577889","display_name":"Yi Luo","orcid":"https://orcid.org/0000-0001-7448-7665"},"institutions":[{"id":"https://openalex.org/I186143895","display_name":"Lehigh University","ror":"https://ror.org/012afjb06","country_code":"US","type":"education","lineage":["https://openalex.org/I186143895"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yi Luo","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX USA ; Department of Computer Science and Engineering, Lehigh University, Bethlehem, PA USA","Department of Computer Science and Engineering, Lehigh University, Bethlehem, PA, USA"],"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX USA ; Department of Computer Science and Engineering, Lehigh University, Bethlehem, PA USA","institution_ids":[]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Lehigh University, Bethlehem, PA, USA","institution_ids":["https://openalex.org/I186143895"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5000223629","display_name":"Yuji Zhang","orcid":"https://orcid.org/0000-0002-5429-6762"},"institutions":[{"id":"https://openalex.org/I126744593","display_name":"University of Maryland, Baltimore","ror":"https://ror.org/04rq5mt64","country_code":"US","type":"education","lineage":["https://openalex.org/I126744593"]},{"id":"https://openalex.org/I4390039285","display_name":"U-M Rogel Cancer Center","ror":"https://ror.org/05asdy483","country_code":null,"type":"funder","lineage":["https://openalex.org/I4210114445","https://openalex.org/I4390039285"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Yuji Zhang","raw_affiliation_strings":["Division of Biostatistics and Bioinformatics, University of Maryland Greenebaum Cancer Center, Baltimore, MD USA ; Department of Epidemiology and Public Health, University of Maryland School of Medicine, Baltimore, MD USA","Division of Biostatistics and Bioinformatics, University of Maryland Greenebaum Cancer Center, Baltimore, MD, USA"],"affiliations":[{"raw_affiliation_string":"Division of Biostatistics and Bioinformatics, University of Maryland Greenebaum Cancer Center, Baltimore, MD USA ; Department of Epidemiology and Public Health, University of Maryland School of Medicine, Baltimore, MD USA","institution_ids":[]},{"raw_affiliation_string":"Division of Biostatistics and Bioinformatics, University of Maryland Greenebaum Cancer Center, Baltimore, MD, USA","institution_ids":["https://openalex.org/I126744593","https://openalex.org/I4390039285"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5000223629"],"corresponding_institution_ids":["https://openalex.org/I126744593","https://openalex.org/I4390039285"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.0,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.1098407,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"7","issue":"1","first_page":"36","last_page":"36"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11819","display_name":"Data-Driven Disease Surveillance","score":0.9801999926567078,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.979200005531311,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/adverse-event-reporting-system","display_name":"Adverse Event Reporting System","score":0.9220893383026123},{"id":"https://openalex.org/keywords/rdf","display_name":"RDF","score":0.7412182092666626},{"id":"https://openalex.org/keywords/vaccination","display_name":"Vaccination","score":0.627863883972168},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5684866905212402},{"id":"https://openalex.org/keywords/event","display_name":"Event (particle physics)","score":0.4442744255065918},{"id":"https://openalex.org/keywords/adverse-effect","display_name":"Adverse effect","score":0.4228041470050812},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3965124189853668},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3407938480377197},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.1409589946269989}],"concepts":[{"id":"https://openalex.org/C2777105317","wikidata":"https://www.wikidata.org/wiki/Q4686710","display_name":"Adverse Event Reporting System","level":3,"score":0.9220893383026123},{"id":"https://openalex.org/C147497476","wikidata":"https://www.wikidata.org/wiki/Q54872","display_name":"RDF","level":3,"score":0.7412182092666626},{"id":"https://openalex.org/C22070199","wikidata":"https://www.wikidata.org/wiki/Q192995","display_name":"Vaccination","level":2,"score":0.627863883972168},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5684866905212402},{"id":"https://openalex.org/C2779662365","wikidata":"https://www.wikidata.org/wiki/Q5416694","display_name":"Event (particle physics)","level":2,"score":0.4442744255065918},{"id":"https://openalex.org/C197934379","wikidata":"https://www.wikidata.org/wiki/Q2047938","display_name":"Adverse effect","level":2,"score":0.4228041470050812},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3965124189853668},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3407938480377197},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.1409589946269989},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/s13040-014-0036-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-014-0036-y","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-014-0036-y","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},{"id":"pmid:25699091","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25699091","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData mining","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4333877","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4333877","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Min","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13040-014-0036-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-014-0036-y","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-014-0036-y","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6080774854","display_name":null,"funder_award_id":"P30CA134274","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G660503538","display_name":null,"funder_award_id":"R01LM011829","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G6722274703","display_name":null,"funder_award_id":"CA134274","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G7435482181","display_name":null,"funder_award_id":"R01LM011829","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8654496089","display_name":null,"funder_award_id":"P30CA134274","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2106634696.pdf","grobid_xml":"https://content.openalex.org/works/W2106634696.grobid-xml"},"referenced_works_count":16,"referenced_works":["https://openalex.org/W1929627202","https://openalex.org/W1984789788","https://openalex.org/W2036965053","https://openalex.org/W2042651385","https://openalex.org/W2083045667","https://openalex.org/W2098987784","https://openalex.org/W2099656145","https://openalex.org/W2119220491","https://openalex.org/W2138903443","https://openalex.org/W2143448637","https://openalex.org/W2153121902","https://openalex.org/W2155142785","https://openalex.org/W2155157373","https://openalex.org/W2158299492","https://openalex.org/W2163827272","https://openalex.org/W2184417913"],"related_works":["https://openalex.org/W1669499790","https://openalex.org/W4282838629","https://openalex.org/W4281861147","https://openalex.org/W4391172823","https://openalex.org/W4388132138","https://openalex.org/W2342267228","https://openalex.org/W3011938841","https://openalex.org/W2918034594","https://openalex.org/W4280493563","https://openalex.org/W2982021612"],"abstract_inverted_index":{"The":[0,27,40,58],"1990-2013":[1],"data":[2],"from":[3,8],"VAERS":[4,10],"has":[5],"been":[6],"extracted":[7],"the":[9],"database.":[11],"There":[12],"are":[13],"83,148":[14],"unique":[15],"vaccine-symptom":[16,36,48,62],"pairs":[17],"with":[18,69],"75":[19],"vaccine":[20],"types":[21],"and":[22,29,86],"5,865":[23],"different":[24],"reported":[25,35],"symptoms.":[26],"yearly":[28],"over":[30],"PRR":[31,51],"values":[32],"for":[33],"each":[34],"pair":[37],"were":[38,55],"calculated.":[39],"network":[41,64],"properties":[42],"of":[43,46,81,89],"networks":[44],"consisting":[45],"significant":[47],"associations":[49],"(i.e.,":[50],"larger":[52],"than":[53],"1)":[54],"then":[56],"investigated.":[57],"results":[59],"indicated":[60],"that":[61],"association":[63],"is":[65],"a":[66,87],"dense":[67],"network,":[68],"any":[70],"given":[71],"node":[72],"connected":[73],"to":[74],"all":[75],"other":[76,84],"nodes":[77,85],"through":[78],"an":[79],"average":[80],"approximately":[82],"two":[83],"maximum":[88],"five":[90],"nodes.":[91]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
