{"id":"https://openalex.org/W2134447775","doi":"https://doi.org/10.1186/s13040-014-0031-3","title":"Prediction of protein solvent accessibility using PSO-SVR with multiple sequence-derived features and weighted sliding window scheme","display_name":"Prediction of protein solvent accessibility using PSO-SVR with multiple sequence-derived features and weighted sliding window scheme","publication_year":2015,"publication_date":"2015-01-30","ids":{"openalex":"https://openalex.org/W2134447775","doi":"https://doi.org/10.1186/s13040-014-0031-3","mag":"2134447775","pmid":"https://pubmed.ncbi.nlm.nih.gov/26478747"},"language":"en","primary_location":{"id":"doi:10.1186/s13040-014-0031-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-014-0031-3","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-014-0031-3","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-014-0031-3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057149168","display_name":"Jian Zhang","orcid":"https://orcid.org/0000-0001-7155-7760"},"institutions":[{"id":"https://openalex.org/I184983240","display_name":"Northeast Normal University","ror":"https://ror.org/02rkvz144","country_code":"CN","type":"education","lineage":["https://openalex.org/I184983240"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian Zhang","raw_affiliation_strings":["School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117 P.R. China","School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117 P.R. China","institution_ids":["https://openalex.org/I184983240"]},{"raw_affiliation_string":"School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117, P.R. China","institution_ids":["https://openalex.org/I184983240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100727146","display_name":"Wenhan Chen","orcid":"https://orcid.org/0000-0002-0577-4895"},"institutions":[{"id":"https://openalex.org/I165143802","display_name":"The University of Queensland","ror":"https://ror.org/00rqy9422","country_code":"AU","type":"education","lineage":["https://openalex.org/I165143802"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Wenhan Chen","raw_affiliation_strings":["School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Queensland Australia","School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Queensland, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Queensland Australia","institution_ids":["https://openalex.org/I165143802"]},{"raw_affiliation_string":"School of Chemistry and Molecular Biosciences, The University of Queensland, Brisbane, Queensland, Australia","institution_ids":["https://openalex.org/I165143802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5120839754","display_name":"Pingping Sun","orcid":"https://orcid.org/0000-0002-9193-4321"},"institutions":[{"id":"https://openalex.org/I184983240","display_name":"Northeast Normal University","ror":"https://ror.org/02rkvz144","country_code":"CN","type":"education","lineage":["https://openalex.org/I184983240"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Pingping Sun","raw_affiliation_strings":["School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117 P.R. China ; The Engineering Laboratory for Drug-Gene and Protein Screening, Northeast Normal University, Changchun, 130117 P.R. China","School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117 P.R. China ; The Engineering Laboratory for Drug-Gene and Protein Screening, Northeast Normal University, Changchun, 130117 P.R. China","institution_ids":["https://openalex.org/I184983240"]},{"raw_affiliation_string":"School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117, P.R. China","institution_ids":["https://openalex.org/I184983240"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101401076","display_name":"Xiaowei Zhao","orcid":"https://orcid.org/0000-0002-9868-5102"},"institutions":[{"id":"https://openalex.org/I184983240","display_name":"Northeast Normal University","ror":"https://ror.org/02rkvz144","country_code":"CN","type":"education","lineage":["https://openalex.org/I184983240"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiaowei Zhao","raw_affiliation_strings":["School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117 P.R. China ; The Engineering Laboratory for Drug-Gene and Protein Screening, Northeast Normal University, Changchun, 130117 P.R. China","School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117 P.R. China ; The Engineering Laboratory for Drug-Gene and Protein Screening, Northeast Normal University, Changchun, 130117 P.R. China","institution_ids":["https://openalex.org/I184983240"]},{"raw_affiliation_string":"School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117, P.R. China","institution_ids":["https://openalex.org/I184983240"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5038788906","display_name":"Zhiqiang Ma","orcid":"https://orcid.org/0000-0002-1922-6283"},"institutions":[{"id":"https://openalex.org/I184983240","display_name":"Northeast Normal University","ror":"https://ror.org/02rkvz144","country_code":"CN","type":"education","lineage":["https://openalex.org/I184983240"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zhiqiang Ma","raw_affiliation_strings":["School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117 P.R. China","School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117, P.R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117 P.R. China","institution_ids":["https://openalex.org/I184983240"]},{"raw_affiliation_string":"School of Computer Science and Information Technology, Northeast Normal University, Changchun, 1300117, P.R. China","institution_ids":["https://openalex.org/I184983240"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5038788906","https://openalex.org/A5101401076"],"corresponding_institution_ids":["https://openalex.org/I184983240"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.6567,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":{"value":0.83894222,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"8","issue":"1","first_page":"3","last_page":"3"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.34549999237060547,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.34549999237060547,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.29580000042915344,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.226500004529953,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/sliding-window-protocol","display_name":"Sliding window protocol","score":0.7357144951820374},{"id":"https://openalex.org/keywords/scheme","display_name":"Scheme (mathematics)","score":0.6789382100105286},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.6669231653213501},{"id":"https://openalex.org/keywords/window","display_name":"Window (computing)","score":0.5797533988952637},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5443488955497742},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4311313033103943},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.41879045963287354},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3947654664516449},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.35049715638160706},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.34656137228012085},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.2594606280326843},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08262515068054199},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.06840521097183228}],"concepts":[{"id":"https://openalex.org/C102392041","wikidata":"https://www.wikidata.org/wiki/Q592860","display_name":"Sliding window protocol","level":3,"score":0.7357144951820374},{"id":"https://openalex.org/C77618280","wikidata":"https://www.wikidata.org/wiki/Q1155772","display_name":"Scheme (mathematics)","level":2,"score":0.6789382100105286},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.6669231653213501},{"id":"https://openalex.org/C2778751112","wikidata":"https://www.wikidata.org/wiki/Q835016","display_name":"Window (computing)","level":2,"score":0.5797533988952637},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5443488955497742},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4311313033103943},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.41879045963287354},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3947654664516449},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.35049715638160706},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.34656137228012085},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.2594606280326843},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08262515068054199},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.06840521097183228},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/s13040-014-0031-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-014-0031-3","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-014-0031-3","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},{"id":"pmid:26478747","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26478747","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData mining","raw_type":null},{"id":"pmh:oai:espace.library.uq.edu.au:UQ:372660","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306402388","display_name":"Queensland's institutional digital repository (The University of Queensland)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I165143802","host_organization_name":"The University of Queensland","host_organization_lineage":["https://openalex.org/I165143802"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4608127","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4608127","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BioData Min","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13040-014-0031-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13040-014-0031-3","pdf_url":"https://biodatamining.biomedcentral.com/counter/pdf/10.1186/s13040-014-0031-3","source":{"id":"https://openalex.org/S84409260","display_name":"BioData Mining","issn_l":"1756-0381","issn":["1756-0381"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BioData Mining","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities","score":0.6800000071525574}],"awards":[{"id":"https://openalex.org/G1166598710","display_name":null,"funder_award_id":"12QNJJ005","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G1282807105","display_name":null,"funder_award_id":"14QNJJ029","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G1571748148","display_name":null,"funder_award_id":"20130043110016","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G2578966333","display_name":null,"funder_award_id":"12QNJJ005","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3315888154","display_name":null,"funder_award_id":"61403077","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3790405310","display_name":null,"funder_award_id":"2014M550166","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G4494645846","display_name":null,"funder_award_id":"14QNJJ029","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5181277585","display_name":null,"funder_award_id":"2014M550166","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5833708368","display_name":null,"funder_award_id":"111900166","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G6595668915","display_name":null,"funder_award_id":"20130043110016","funder_id":"https://openalex.org/F4320336024","funder_display_name":"Specialized Research Fund for the Doctoral Program of Higher Education of China"},{"id":"https://openalex.org/G7134136075","display_name":null,"funder_award_id":"14ZZ2240","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null},{"id":"https://openalex.org/F4320336024","display_name":"Specialized Research Fund for the Doctoral Program of Higher Education of China","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2134447775.pdf","grobid_xml":"https://content.openalex.org/works/W2134447775.grobid-xml"},"referenced_works_count":55,"referenced_works":["https://openalex.org/W1530470635","https://openalex.org/W1558918611","https://openalex.org/W1924290394","https://openalex.org/W1964880253","https://openalex.org/W1967609592","https://openalex.org/W1982633968","https://openalex.org/W1986795639","https://openalex.org/W1989048657","https://openalex.org/W1991731290","https://openalex.org/W2005750609","https://openalex.org/W2006192061","https://openalex.org/W2008708467","https://openalex.org/W2011402521","https://openalex.org/W2016328316","https://openalex.org/W2018559830","https://openalex.org/W2030776726","https://openalex.org/W2030990710","https://openalex.org/W2037603210","https://openalex.org/W2040502656","https://openalex.org/W2071834506","https://openalex.org/W2075188473","https://openalex.org/W2082206279","https://openalex.org/W2092920038","https://openalex.org/W2096773908","https://openalex.org/W2099886875","https://openalex.org/W2102701612","https://openalex.org/W2103404876","https://openalex.org/W2110237390","https://openalex.org/W2111705855","https://openalex.org/W2112109058","https://openalex.org/W2117519369","https://openalex.org/W2120977203","https://openalex.org/W2121166097","https://openalex.org/W2122410355","https://openalex.org/W2123957843","https://openalex.org/W2128941049","https://openalex.org/W2135478427","https://openalex.org/W2135753651","https://openalex.org/W2139582206","https://openalex.org/W2141885858","https://openalex.org/W2144316442","https://openalex.org/W2148204968","https://openalex.org/W2148471287","https://openalex.org/W2150346640","https://openalex.org/W2153153865","https://openalex.org/W2153635508","https://openalex.org/W2154335467","https://openalex.org/W2157259034","https://openalex.org/W2158714788","https://openalex.org/W2158919479","https://openalex.org/W2161005920","https://openalex.org/W2161628345","https://openalex.org/W2171781238","https://openalex.org/W3120421331","https://openalex.org/W4210531204"],"related_works":["https://openalex.org/W2109115373","https://openalex.org/W2390901981","https://openalex.org/W2353818951","https://openalex.org/W2090763504","https://openalex.org/W1605879311","https://openalex.org/W4230691760","https://openalex.org/W2385763735","https://openalex.org/W148178222","https://openalex.org/W2386394344","https://openalex.org/W3014558862"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1],"prediction":[2,91,237],"of":[3,49,68,106,155,161,181,218,226],"solvent":[4,42,63,133],"accessibility":[5,64],"could":[6],"provide":[7],"valuable":[8],"clues":[9],"for":[10,201,228],"analyzing":[11],"protein":[12,18,41,51,62,139,143],"structure":[13,20,48],"and":[14,21,102,150,220,258,270],"functions,":[15],"such":[16],"as":[17],"3-Dimensional":[19],"B-cell":[22],"epitope":[23],"prediction.":[24],"To":[25,110],"fully":[26],"decipher":[27],"the":[28,40,46,50,61,66,80,90,103,131,158,179,185,197,202,213,221,235,240],"protein-protein":[29],"interaction":[30],"process,":[31],"an":[32],"initial":[33],"but":[34],"crucial":[35],"step":[36],"is":[37,52,71,175,193,268],"to":[38,78,127,177,195],"calculate":[39],"accessibility,":[43],"especially":[44],"when":[45],"tertiary":[47],"unknown.":[53],"Although":[54],"some":[55,86],"efforts":[56],"have":[57,124],"been":[58,125],"put":[59],"into":[60],"prediction,":[65],"performance":[67],"existing":[69,261],"methods":[70],"far":[72],"from":[73],"satisfaction.":[74],"METHODS:":[75],"In":[76],"order":[77],"develop":[79],"high-accuracy":[81],"model,":[82],"we":[83,114,119],"focus":[84],"on":[85,184],"possible":[87],"aspects":[88],"concerning":[89],"performance,":[92],"including":[93],"several":[94,151],"sequence-derived":[95],"features,":[96],"a":[97,170],"weighted":[98,171],"sliding":[99,165,172],"window":[100,166,173],"scheme":[101,174],"parameters":[104,200],"optimization":[105,191],"machine":[107],"learning":[108],"approach.":[109],"address":[111],"above":[112],"issues,":[113],"take":[115],"following":[116],"strategies.":[117],"Firstly,":[118],"explore":[120],"various":[121],"features":[122,137],"which":[123],"observed":[126],"be":[128],"associated":[129],"with":[130,234],"residue":[132],"accessibility.":[134],"These":[135],"discriminative":[136],"include":[138],"evolutionary":[140],"information,":[141],"predicted":[142],"secondary":[144],"structure,":[145],"native":[146],"disorder,":[147],"physicochemical":[148],"propensities":[149],"sequence-based":[152],"structural":[153],"descriptors":[154],"residues.":[156],"Secondly,":[157],"different":[159],"contributions":[160,180],"adjacent":[162,182],"residues":[163,183],"in":[164,239],"are":[167],"observed,":[168],"thus":[169],"proposed":[176,203],"differentiate":[178],"central":[186],"residue.":[187],"Thirdly,":[188],"particle":[189],"swarm":[190],"(PSO)":[192],"employed":[194],"search":[196],"global":[198],"best":[199],"predictor.":[204],"RESULTS:":[205],"Evaluated":[206],"by":[207],"3-fold":[208],"cross-validation,":[209],"our":[210,229,244,253],"method":[211,245],"achieves":[212,255],"mean":[214],"absolute":[215],"error":[216],"(MAE)":[217],"14.1%":[219],"person":[222],"correlation":[223],"coefficient":[224],"(PCC)":[225],"0.75":[227],"new-compiled":[230],"dataset.":[231],"When":[232],"compared":[233],"state-of-the-art":[236],"models":[238],"two":[241],"benchmark":[242],"datasets,":[243],"demonstrates":[246],"better":[247],"performance.":[248],"Experimental":[249],"results":[250],"demonstrate":[251],"that":[252],"PSAP":[254,267],"high":[256],"performances":[257],"outperforms":[259],"many":[260],"predictors.":[262],"A":[263],"web":[264],"server":[265],"called":[266],"built":[269],"freely":[271],"available":[272],"at":[273],"http://59.73.198.144:8088/SolventAccessibility/.":[274]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":5}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
