{"id":"https://openalex.org/W3192846055","doi":"https://doi.org/10.1186/s13015-021-00198-1","title":"INGOT-DR: an interpretable classifier for predicting drug resistance in M. tuberculosis","display_name":"INGOT-DR: an interpretable classifier for predicting drug resistance in M. tuberculosis","publication_year":2021,"publication_date":"2021-08-10","ids":{"openalex":"https://openalex.org/W3192846055","doi":"https://doi.org/10.1186/s13015-021-00198-1","mag":"3192846055","pmid":"https://pubmed.ncbi.nlm.nih.gov/34376217"},"language":"en","primary_location":{"id":"doi:10.1186/s13015-021-00198-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13015-021-00198-1","pdf_url":"https://almob.biomedcentral.com/track/pdf/10.1186/s13015-021-00198-1","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://almob.biomedcentral.com/track/pdf/10.1186/s13015-021-00198-1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5052762714","display_name":"Hooman Zabeti","orcid":null},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Hooman Zabeti","raw_affiliation_strings":["School of Computing Science, Simon Fraser University, Burnaby, Canada. hooman_zabeti@sfu.ca","School of Computing Science, Simon Fraser University, Burnaby, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing Science, Simon Fraser University, Burnaby, Canada. hooman_zabeti@sfu.ca","institution_ids":["https://openalex.org/I18014758"]},{"raw_affiliation_string":"School of Computing Science, Simon Fraser University, Burnaby, Canada","institution_ids":["https://openalex.org/I18014758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077931522","display_name":"Nick Dexter","orcid":null},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Nick Dexter","raw_affiliation_strings":["Department of Mathematics, Simon Fraser University, Burnaby, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Mathematics, Simon Fraser University, Burnaby, Canada","institution_ids":["https://openalex.org/I18014758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083414674","display_name":"Amir Safari","orcid":"https://orcid.org/0000-0003-1377-7444"},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Amir Hosein Safari","raw_affiliation_strings":["School of Computing Science, Simon Fraser University, Burnaby, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing Science, Simon Fraser University, Burnaby, Canada","institution_ids":["https://openalex.org/I18014758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021888945","display_name":"Nafiseh Sedaghat","orcid":null},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Nafiseh Sedaghat","raw_affiliation_strings":["School of Computing Science, Simon Fraser University, Burnaby, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing Science, Simon Fraser University, Burnaby, Canada","institution_ids":["https://openalex.org/I18014758"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016115107","display_name":"Maxwell W. Libbrecht","orcid":"https://orcid.org/0000-0003-2502-0262"},"institutions":[{"id":"https://openalex.org/I18014758","display_name":"Simon Fraser University","ror":"https://ror.org/0213rcc28","country_code":"CA","type":"education","lineage":["https://openalex.org/I18014758"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Maxwell Libbrecht","raw_affiliation_strings":["School of Computing Science, Simon Fraser University, Burnaby, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing Science, Simon Fraser University, Burnaby, Canada","institution_ids":["https://openalex.org/I18014758"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5065939739","display_name":"Leonid Chindelevitch","orcid":"https://orcid.org/0000-0002-6619-6013"},"institutions":[{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Leonid Chindelevitch","raw_affiliation_strings":["Department of Infectious Disease Epidemiology, Imperial College, London, UK"],"raw_orcid":"https://orcid.org/0000-0002-6619-6013","affiliations":[{"raw_affiliation_string":"Department of Infectious Disease Epidemiology, Imperial College, London, UK","institution_ids":["https://openalex.org/I47508984"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5052762714"],"corresponding_institution_ids":["https://openalex.org/I18014758"],"apc_list":{"value":1490,"currency":"GBP","value_usd":1827},"apc_paid":{"value":1490,"currency":"GBP","value_usd":1827},"fwci":0.7172,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.73679557,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"16","issue":"1","first_page":"17","last_page":"17"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.7285000085830688,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.7285000085830688,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.04490000009536743,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.027799999341368675,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interpretability","display_name":"Interpretability","score":0.8429582118988037},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7506538033485413},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.7073602676391602},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6333668231964111},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.5478420853614807},{"id":"https://openalex.org/keywords/tuberculosis","display_name":"Tuberculosis","score":0.5260294079780579},{"id":"https://openalex.org/keywords/mycobacterium-tuberculosis","display_name":"Mycobacterium tuberculosis","score":0.4359254539012909},{"id":"https://openalex.org/keywords/test-set","display_name":"Test set","score":0.42920905351638794},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3524533808231354},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.09107369184494019}],"concepts":[{"id":"https://openalex.org/C2781067378","wikidata":"https://www.wikidata.org/wiki/Q17027399","display_name":"Interpretability","level":2,"score":0.8429582118988037},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7506538033485413},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.7073602676391602},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6333668231964111},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.5478420853614807},{"id":"https://openalex.org/C2781069245","wikidata":"https://www.wikidata.org/wiki/Q12204","display_name":"Tuberculosis","level":2,"score":0.5260294079780579},{"id":"https://openalex.org/C2777975735","wikidata":"https://www.wikidata.org/wiki/Q130971","display_name":"Mycobacterium tuberculosis","level":3,"score":0.4359254539012909},{"id":"https://openalex.org/C169903167","wikidata":"https://www.wikidata.org/wiki/Q3985153","display_name":"Test set","level":2,"score":0.42920905351638794},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3524533808231354},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.09107369184494019},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1186/s13015-021-00198-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13015-021-00198-1","pdf_url":"https://almob.biomedcentral.com/track/pdf/10.1186/s13015-021-00198-1","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},{"id":"pmid:34376217","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34376217","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for molecular biology : AMB","raw_type":null},{"id":"pmh:oai:summit.sfu.ca:21417","is_oa":true,"landing_page_url":"http://summit.sfu.ca/item/21417","pdf_url":"http://summit.sfu.ca/item/21417","source":{"id":"https://openalex.org/S4306400490","display_name":"Summit (Simon Fraser University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I18014758","host_organization_name":"Simon Fraser University","host_organization_lineage":["https://openalex.org/I18014758"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:doaj.org/article:c2c4edd3d7db414fa088a1c8e32075ae","is_oa":true,"landing_page_url":"https://doaj.org/article/c2c4edd3d7db414fa088a1c8e32075ae","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms for Molecular Biology, Vol 16, Iss 1, Pp 1-12 (2021)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8353837","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8353837","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms Mol Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13015-021-00198-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13015-021-00198-1","pdf_url":"https://almob.biomedcentral.com/track/pdf/10.1186/s13015-021-00198-1","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6899999976158142,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G1052272520","display_name":null,"funder_award_id":"MR/R015600/1","funder_id":"https://openalex.org/F4320338462","funder_display_name":"European and Developing Countries Clinical Trials Partnership"},{"id":"https://openalex.org/G2249438632","display_name":null,"funder_award_id":"MR/R015600/1","funder_id":"https://openalex.org/F4320320190","funder_display_name":"Foreign and Commonwealth Office"},{"id":"https://openalex.org/G2740751069","display_name":"MRC Centre for Global Infectious Disease Analysis","funder_award_id":"MR/R015600/1","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G393184570","display_name":null,"funder_award_id":"MR/R015600/1","funder_id":"https://openalex.org/F4320330760","funder_display_name":"Foreign, Commonwealth and Development Office"},{"id":"https://openalex.org/G4674787718","display_name":null,"funder_award_id":"BAC283","funder_id":"https://openalex.org/F4320310787","funder_display_name":"Genome Canada"},{"id":"https://openalex.org/G6520098237","display_name":null,"funder_award_id":"MR/R015600/1","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"},{"id":"https://openalex.org/G7063735130","display_name":null,"funder_award_id":"EDCTP2","funder_id":"https://openalex.org/F4320338462","funder_display_name":"European and Developing Countries Clinical Trials Partnership"}],"funders":[{"id":"https://openalex.org/F4320310787","display_name":"Genome Canada","ror":"https://ror.org/029s29983"},{"id":"https://openalex.org/F4320320190","display_name":"Foreign and Commonwealth Office","ror":"https://ror.org/02vtmh618"},{"id":"https://openalex.org/F4320330760","display_name":"Foreign, Commonwealth and Development Office","ror":null},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"},{"id":"https://openalex.org/F4320338462","display_name":"European and Developing Countries Clinical Trials Partnership","ror":"https://ror.org/031jv9v19"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3192846055.pdf","grobid_xml":"https://content.openalex.org/works/W3192846055.grobid-xml"},"referenced_works_count":72,"referenced_works":["https://openalex.org/W143004564","https://openalex.org/W340244495","https://openalex.org/W1863711781","https://openalex.org/W1974359669","https://openalex.org/W1975680434","https://openalex.org/W1986708244","https://openalex.org/W1987093848","https://openalex.org/W2012473911","https://openalex.org/W2020390700","https://openalex.org/W2028781966","https://openalex.org/W2044762091","https://openalex.org/W2056558085","https://openalex.org/W2062095762","https://openalex.org/W2077278144","https://openalex.org/W2078478947","https://openalex.org/W2087347434","https://openalex.org/W2091374137","https://openalex.org/W2095680943","https://openalex.org/W2098902711","https://openalex.org/W2101234009","https://openalex.org/W2101478678","https://openalex.org/W2101627389","https://openalex.org/W2101675075","https://openalex.org/W2108234281","https://openalex.org/W2116041602","https://openalex.org/W2116844530","https://openalex.org/W2119667497","https://openalex.org/W2119821739","https://openalex.org/W2120358246","https://openalex.org/W2132697669","https://openalex.org/W2140122025","https://openalex.org/W2158100429","https://openalex.org/W2158419847","https://openalex.org/W2158829028","https://openalex.org/W2179581006","https://openalex.org/W2194586233","https://openalex.org/W2196956961","https://openalex.org/W2236299009","https://openalex.org/W2606138983","https://openalex.org/W2618851150","https://openalex.org/W2731142262","https://openalex.org/W2736752504","https://openalex.org/W2770095154","https://openalex.org/W2771835478","https://openalex.org/W2779510789","https://openalex.org/W2788327314","https://openalex.org/W2794175964","https://openalex.org/W2804395101","https://openalex.org/W2887711510","https://openalex.org/W2901155787","https://openalex.org/W2910705748","https://openalex.org/W2911964244","https://openalex.org/W2912457157","https://openalex.org/W2920744809","https://openalex.org/W2943077106","https://openalex.org/W2944254847","https://openalex.org/W2946412743","https://openalex.org/W2946544082","https://openalex.org/W2949820012","https://openalex.org/W2950657048","https://openalex.org/W2951274106","https://openalex.org/W2971492877","https://openalex.org/W2978614073","https://openalex.org/W2999615587","https://openalex.org/W3004252453","https://openalex.org/W3007426492","https://openalex.org/W3099488484","https://openalex.org/W3103169419","https://openalex.org/W4239510810","https://openalex.org/W4300263211","https://openalex.org/W6675354045","https://openalex.org/W6677164697"],"related_works":["https://openalex.org/W4308058527","https://openalex.org/W2972094210","https://openalex.org/W2110949356","https://openalex.org/W1538374398","https://openalex.org/W2050407936","https://openalex.org/W2042252940","https://openalex.org/W2411061500","https://openalex.org/W3160640465","https://openalex.org/W2394233015","https://openalex.org/W4206946219"],"abstract_inverted_index":{"MOTIVATION:":[0],"Prediction":[1],"of":[2,7,19,46,61,164,190,249],"drug":[3,209],"resistance":[4],"and":[5,32,86,132,143,170,196,216,230],"identification":[6],"its":[8],"mechanisms":[9],"in":[10,202,252],"bacteria":[11],"such":[12],"as":[13],"Mycobacterium":[14],"tuberculosis,":[15,20],"the":[16,50,71,95,109,155,161,250,253],"etiological":[17],"agent":[18],"is":[21,144,197,213,226,244],"a":[22,29,59,104,125,183],"challenging":[23],"problem.":[24],"Solving":[25],"this":[26,41,121],"problem":[27],"requires":[28],"transparent,":[30],"accurate,":[31],"flexible":[33,145],"predictive":[34,68,80,162],"model.":[35],"The":[36,235],"methods":[37,100],"currently":[38],"used":[39,174,192],"for":[40,94,150,175,220],"purpose":[42],"rarely":[43],"satisfy":[44],"all":[45],"these":[47],"criteria.":[48],"On":[49],"one":[51],"hand,":[52,73],"approaches":[53],"based":[54],"on":[55,70,167],"testing":[56,131],"strains":[57],"against":[58],"catalogue":[60],"previously":[62,116,205],"identified":[63],"mutations":[64],"often":[65,83],"yield":[66],"poor":[67],"performance;":[69],"other":[72],"machine":[74,193,255],"learning":[75,194,256],"techniques":[76],"typically":[77],"have":[78],"higher":[79,184],"accuracy,":[81],"but":[82],"lack":[84,108],"interpretability":[85],"may":[87,101],"learn":[88],"patterns":[89],"that":[90,180,189],"produce":[91],"accurate":[92,139],"predictions":[93],"wrong":[96],"reasons.":[97],"Current":[98],"interpretable":[99,141],"either":[102],"exhibit":[103],"lower":[105],"accuracy":[106,163,187],"or":[107,185],"flexibility":[110],"needed":[111],"to":[112,115,147,188,199,208],"generalize":[113],"them":[114],"unseen":[117],"data.":[118],"CONTRIBUTION:":[119],"In":[120],"paper":[122],"we":[123],"propose":[124],"novel":[126],"technique,":[127],"inspired":[128],"by":[129],"group":[130],"Boolean":[133],"compressed":[134],"sensing,":[135],"which":[136],"yields":[137],"highly":[138],"predictions,":[140],"results,":[142],"enough":[146],"be":[148,218,232],"optimized":[149],"various":[151],"evaluation":[152,222],"metrics":[153],"at":[154,228],"same":[156],"time.":[157],"RESULTS:":[158],"We":[159,178],"test":[160],"our":[165],"approach":[166],"five":[168],"first-line":[169],"seven":[171],"second-line":[172],"antibiotics":[173],"treating":[176],"tuberculosis.":[177],"find":[179],"it":[181],"has":[182],"comparable":[186],"commonly":[191],"models,":[195],"able":[198],"identify":[200],"variants":[201],"genes":[203],"with":[204,247],"reported":[206],"association":[207],"resistance.":[210],"Our":[211,224],"method":[212],"intrinsically":[214],"interpretable,":[215],"can":[217,231],"customized":[219],"different":[221],"metrics.":[223],"implementation":[225],"available":[227],"github.com/hoomanzabeti/INGOT_DR":[229],"installed":[233],"via":[234],"Python":[236],"Package":[237],"Index":[238],"(Pypi)":[239],"under":[240],"ingotdr.":[241],"This":[242],"package":[243],"also":[245],"compatible":[246],"most":[248],"tools":[251],"Scikit-learn":[254],"library.":[257]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":2}],"updated_date":"2026-05-10T08:33:47.465468","created_date":"2025-10-10T00:00:00"}
