{"id":"https://openalex.org/W2339182468","doi":"https://doi.org/10.1186/s13015-016-0067-7","title":"The link between orthology relations and gene trees: a correction perspective","display_name":"The link between orthology relations and gene trees: a correction perspective","publication_year":2016,"publication_date":"2016-04-15","ids":{"openalex":"https://openalex.org/W2339182468","doi":"https://doi.org/10.1186/s13015-016-0067-7","mag":"2339182468","pmid":"https://pubmed.ncbi.nlm.nih.gov/27087831"},"language":"en","primary_location":{"id":"doi:10.1186/s13015-016-0067-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13015-016-0067-7","pdf_url":"https://almob.biomedcentral.com/track/pdf/10.1186/s13015-016-0067-7","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://almob.biomedcentral.com/track/pdf/10.1186/s13015-016-0067-7","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016796629","display_name":"Manuel Lafond","orcid":"https://orcid.org/0000-0002-5305-7372"},"institutions":[{"id":"https://openalex.org/I4210111842","display_name":"Computer Research Institute of Montr\u00e9al","ror":"https://ror.org/0279d5115","country_code":"CA","type":"nonprofit","lineage":["https://openalex.org/I4210111842"]},{"id":"https://openalex.org/I4210161954","display_name":"D\u00e9partement d'Informatique","ror":"https://ror.org/05y6rqs46","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2746051580","https://openalex.org/I29607241","https://openalex.org/I4210159245","https://openalex.org/I4210161954"]},{"id":"https://openalex.org/I70931966","display_name":"Universit\u00e9 de Montr\u00e9al","ror":"https://ror.org/0161xgx34","country_code":"CA","type":"education","lineage":["https://openalex.org/I70931966"]}],"countries":["CA","FR"],"is_corresponding":true,"raw_author_name":"Manuel Lafond","raw_affiliation_strings":["D\u00e9partement d'informatique et de recherche op\u00e9rationnelle, Universit\u00e9 de Montr\u00e9al, Montreal, QC Canada","D\u00e9partement d'informatique et de recherche op\u00e9rationnelle, Universit\u00e9 de Montr\u00e9al, Montreal, QC, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"D\u00e9partement d'informatique et de recherche op\u00e9rationnelle, Universit\u00e9 de Montr\u00e9al, Montreal, QC Canada","institution_ids":["https://openalex.org/I4210111842","https://openalex.org/I4210161954","https://openalex.org/I70931966"]},{"raw_affiliation_string":"D\u00e9partement d'informatique et de recherche op\u00e9rationnelle, Universit\u00e9 de Montr\u00e9al, Montreal, QC, Canada","institution_ids":["https://openalex.org/I70931966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110357719","display_name":"Riccardo Dondi","orcid":null},"institutions":[{"id":"https://openalex.org/I11039511","display_name":"University of Bergamo","ror":"https://ror.org/02mbd5571","country_code":"IT","type":"education","lineage":["https://openalex.org/I11039511"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Riccardo Dondi","raw_affiliation_strings":["Dipartimento di Scienze Umane e Sociali, Universit\u00e0 degli Studi di Bergamo, Via Donizetti 3, 24129 Bergamo, Italy","Dipartimento di Scienze Umane e Sociali, Universit\u00e0 degli Studi di Bergamo, Via Donizetti 3, 24129, Bergamo, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dipartimento di Scienze Umane e Sociali, Universit\u00e0 degli Studi di Bergamo, Via Donizetti 3, 24129 Bergamo, Italy","institution_ids":["https://openalex.org/I11039511"]},{"raw_affiliation_string":"Dipartimento di Scienze Umane e Sociali, Universit\u00e0 degli Studi di Bergamo, Via Donizetti 3, 24129, Bergamo, Italy","institution_ids":["https://openalex.org/I11039511"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5041470344","display_name":"Nadia El-Mabrouk","orcid":"https://orcid.org/0000-0002-5385-1015"},"institutions":[{"id":"https://openalex.org/I4210111842","display_name":"Computer Research Institute of Montr\u00e9al","ror":"https://ror.org/0279d5115","country_code":"CA","type":"nonprofit","lineage":["https://openalex.org/I4210111842"]},{"id":"https://openalex.org/I4210161954","display_name":"D\u00e9partement d'Informatique","ror":"https://ror.org/05y6rqs46","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1326498283","https://openalex.org/I2746051580","https://openalex.org/I29607241","https://openalex.org/I4210159245","https://openalex.org/I4210161954"]},{"id":"https://openalex.org/I70931966","display_name":"Universit\u00e9 de Montr\u00e9al","ror":"https://ror.org/0161xgx34","country_code":"CA","type":"education","lineage":["https://openalex.org/I70931966"]}],"countries":["CA","FR"],"is_corresponding":false,"raw_author_name":"Nadia El-Mabrouk","raw_affiliation_strings":["D\u00e9partement d'informatique et de recherche op\u00e9rationnelle, Universit\u00e9 de Montr\u00e9al, Montreal, QC Canada","D\u00e9partement d'informatique et de recherche op\u00e9rationnelle, Universit\u00e9 de Montr\u00e9al, Montreal, QC, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"D\u00e9partement d'informatique et de recherche op\u00e9rationnelle, Universit\u00e9 de Montr\u00e9al, Montreal, QC Canada","institution_ids":["https://openalex.org/I4210111842","https://openalex.org/I4210161954","https://openalex.org/I70931966"]},{"raw_affiliation_string":"D\u00e9partement d'informatique et de recherche op\u00e9rationnelle, Universit\u00e9 de Montr\u00e9al, Montreal, QC, Canada","institution_ids":["https://openalex.org/I70931966"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5016796629"],"corresponding_institution_ids":["https://openalex.org/I4210111842","https://openalex.org/I4210161954","https://openalex.org/I70931966"],"apc_list":{"value":2290,"currency":"USD","value_usd":2290},"apc_paid":{"value":2290,"currency":"USD","value_usd":2290},"fwci":4.3283,"has_fulltext":true,"cited_by_count":39,"citation_normalized_percentile":{"value":0.94753518,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"11","issue":"1","first_page":"4","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.5184999704360962,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.5184999704360962,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.3149000108242035,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.09109999984502792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/tree","display_name":"Tree (set theory)","score":0.7370729446411133},{"id":"https://openalex.org/keywords/converse","display_name":"Converse","score":0.5877556800842285},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5745171308517456},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.5641132593154907},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.5111616253852844},{"id":"https://openalex.org/keywords/tree-rearrangement","display_name":"Tree rearrangement","score":0.48260295391082764},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.48225289583206177},{"id":"https://openalex.org/keywords/perspective","display_name":"Perspective (graphical)","score":0.4698055386543274},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4234212636947632},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.4205617308616638},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3364751935005188},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.33127903938293457},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.32119131088256836},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.293975830078125},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.19949069619178772},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.17353549599647522},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.13262003660202026}],"concepts":[{"id":"https://openalex.org/C113174947","wikidata":"https://www.wikidata.org/wiki/Q2859736","display_name":"Tree (set theory)","level":2,"score":0.7370729446411133},{"id":"https://openalex.org/C2776809875","wikidata":"https://www.wikidata.org/wiki/Q1375963","display_name":"Converse","level":2,"score":0.5877556800842285},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5745171308517456},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.5641132593154907},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.5111616253852844},{"id":"https://openalex.org/C53208351","wikidata":"https://www.wikidata.org/wiki/Q7837630","display_name":"Tree rearrangement","level":4,"score":0.48260295391082764},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.48225289583206177},{"id":"https://openalex.org/C12713177","wikidata":"https://www.wikidata.org/wiki/Q1900281","display_name":"Perspective (graphical)","level":2,"score":0.4698055386543274},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4234212636947632},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.4205617308616638},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3364751935005188},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.33127903938293457},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.32119131088256836},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.293975830078125},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.19949069619178772},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.17353549599647522},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.13262003660202026},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/s13015-016-0067-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13015-016-0067-7","pdf_url":"https://almob.biomedcentral.com/track/pdf/10.1186/s13015-016-0067-7","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},{"id":"pmid:27087831","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27087831","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for molecular biology : AMB","raw_type":null},{"id":"pmh:oai:aisberg.unibg.it:10446/78327","is_oa":true,"landing_page_url":"http://hdl.handle.net/10446/78327","pdf_url":"http://hdl.handle.net/10446/78327","source":{"id":"https://openalex.org/S4377196347","display_name":"Aisberg (University of Bergamo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I11039511","host_organization_name":"University of Bergamo","host_organization_lineage":["https://openalex.org/I11039511"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4833969","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4833969","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms Mol Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13015-016-0067-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13015-016-0067-7","pdf_url":"https://almob.biomedcentral.com/track/pdf/10.1186/s13015-016-0067-7","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1651825019","display_name":null,"funder_award_id":"ID0EMHAC93","funder_id":"https://openalex.org/F4320334593","funder_display_name":"Natural Sciences and Engineering Research Council of Canada"},{"id":"https://openalex.org/G7168627517","display_name":null,"funder_award_id":"ID0EUIAC94","funder_id":"https://openalex.org/F4320334841","funder_display_name":"Fonds de recherche du Qu\u00e9bec \u2013 Nature et technologies"}],"funders":[{"id":"https://openalex.org/F4320334593","display_name":"Natural Sciences and Engineering Research Council of Canada","ror":"https://ror.org/01h531d29"},{"id":"https://openalex.org/F4320334841","display_name":"Fonds de recherche du Qu\u00e9bec \u2013 Nature et technologies","ror":"https://ror.org/00b9f9778"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2339182468.pdf","grobid_xml":"https://content.openalex.org/works/W2339182468.grobid-xml"},"referenced_works_count":49,"referenced_works":["https://openalex.org/W39630659","https://openalex.org/W272982077","https://openalex.org/W319819633","https://openalex.org/W598887167","https://openalex.org/W1575387405","https://openalex.org/W1586744224","https://openalex.org/W1979835060","https://openalex.org/W1992296962","https://openalex.org/W1997093937","https://openalex.org/W1997130867","https://openalex.org/W2000138132","https://openalex.org/W2008856488","https://openalex.org/W2008978934","https://openalex.org/W2011039300","https://openalex.org/W2013067928","https://openalex.org/W2015981827","https://openalex.org/W2022472106","https://openalex.org/W2024812560","https://openalex.org/W2034115935","https://openalex.org/W2041346050","https://openalex.org/W2052315005","https://openalex.org/W2060425093","https://openalex.org/W2061646232","https://openalex.org/W2065745407","https://openalex.org/W2068640667","https://openalex.org/W2078109763","https://openalex.org/W2088392408","https://openalex.org/W2103017472","https://openalex.org/W2105669285","https://openalex.org/W2119801041","https://openalex.org/W2121654623","https://openalex.org/W2132023322","https://openalex.org/W2133790733","https://openalex.org/W2135123683","https://openalex.org/W2135281627","https://openalex.org/W2135398177","https://openalex.org/W2137604740","https://openalex.org/W2138040811","https://openalex.org/W2138104539","https://openalex.org/W2142045367","https://openalex.org/W2144106734","https://openalex.org/W2151781607","https://openalex.org/W2165484374","https://openalex.org/W2206883064","https://openalex.org/W2610183793","https://openalex.org/W2611804663","https://openalex.org/W4229487902","https://openalex.org/W4231886136","https://openalex.org/W4300550233"],"related_works":["https://openalex.org/W85430217","https://openalex.org/W4205930990","https://openalex.org/W1993799876","https://openalex.org/W2917424786","https://openalex.org/W3088015816","https://openalex.org/W2607237371","https://openalex.org/W3212896338","https://openalex.org/W2362218761","https://openalex.org/W2113708670","https://openalex.org/W2062354928"],"abstract_inverted_index":{"BACKGROUND:":[0],"While":[1],"tree-oriented":[2],"methods":[3,25],"for":[4,159],"inferring":[5],"orthology":[6,38,54],"and":[7,40,119,150,155],"paralogy":[8],"relations":[9,39,88,178,204,223,239],"between":[10,37],"genes":[11,200],"are":[12,26,251],"based":[13,30],"on":[14,31],"reconciling":[15],"a":[16,20,64,70,74,85,116,120,129,173,184,196,214,219,225],"gene":[17,41,71,96,117,130,136,151,215,243],"tree":[18,72,118,131,137,152,216,244],"with":[19,94,183],"species":[21,186],"tree,":[22],"many":[23],"tree-free":[24],"also":[27,189,254],"available":[28],"(usually":[29],"sequence":[32],"similarity).":[33],"Recently,":[34],"the":[35,48,79,134,139,192,235,242,246,258],"link":[36,62],"trees":[42],"has":[43],"been":[44],"formally":[45],"considered":[46],"from":[47,53,63],"perspective":[49],"of":[50,67,76,87,110,122,141,148,161,175,177,194,199,222,237,248,257],"reconstructing":[51],"phylogenies":[52],"relations.":[55,111,142],"In":[56],"this":[57,61],"paper,":[58],"we":[59,165],"consider":[60,145],"correction":[65,153],"point":[66],"view.":[68],"Indeed,":[69],"induces":[73],"set":[75,86,109,121,140,176,221],"relations,":[77,123],"but":[78],"converse":[80],"is":[81,89,101,124,169,205,228],"not":[82,90],"always":[83],"true:":[84],"necessarily":[91],"in":[92,224],"agreement":[93],"any":[95],"tree.":[97,187],"A":[98],"natural":[99,113],"question":[100],"thus":[102],"how":[103,125],"to":[104,126,171,179,207,217,234],"minimally":[105,127],"correct":[106,128],"an":[107],"infeasible":[108],"Another":[112],"question,":[114],"given":[115,185,220,261],"so":[132],"that":[133,167,191,201,212,250],"resulting":[135],"fits":[138],"RESULTS:":[143],"We":[144,188,209,253],"four":[146],"variants":[147],"relation":[149],"problems,":[154],"provide":[156],"hardness":[157,263],"results":[158],"all":[160],"them.":[162],"More":[163],"specifically,":[164],"show":[166,190],"it":[168],"NP-Hard":[170],"edit":[172],"minimum":[174,226],"make":[180],"them":[181],"consistent":[182,203],"problem":[193],"finding":[195],"maximum":[197],"subset":[198],"share":[202],"hard":[206],"approximate.":[208],"then":[210],"demonstrate":[211],"editing":[213],"satisfy":[218],"way":[227],"NP-Hard,":[229],"where":[230],"\"minimum\"":[231],"refers":[232],"either":[233],"number":[236,247],"modified":[238],"depicted":[240],"by":[241],"or":[245],"clades":[249],"lost.":[252],"discuss":[255],"some":[256],"algorithmic":[259],"perspectives":[260],"these":[262],"results.":[264]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":8},{"year":2017,"cited_by_count":11},{"year":2016,"cited_by_count":3}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}