{"id":"https://openalex.org/W2117719890","doi":"https://doi.org/10.1186/s13015-015-0054-4","title":"Inferring interaction type in gene regulatory networks using co-expression data","display_name":"Inferring interaction type in gene regulatory networks using co-expression data","publication_year":2015,"publication_date":"2015-07-07","ids":{"openalex":"https://openalex.org/W2117719890","doi":"https://doi.org/10.1186/s13015-015-0054-4","mag":"2117719890","pmid":"https://pubmed.ncbi.nlm.nih.gov/26157474"},"language":"en","primary_location":{"id":"doi:10.1186/s13015-015-0054-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13015-015-0054-4","pdf_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/s13015-015-0054-4","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/s13015-015-0054-4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085223970","display_name":"Pegah Khosravi","orcid":"https://orcid.org/0000-0003-3497-2820"},"institutions":[{"id":"https://openalex.org/I4210146419","display_name":"Institute for Research in Fundamental Sciences","ror":"https://ror.org/04xreqs31","country_code":"IR","type":"facility","lineage":["https://openalex.org/I4210146419"]},{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA","IR"],"is_corresponding":true,"raw_author_name":"Pegah Khosravi","raw_affiliation_strings":["School of Biological Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran","The Donnelly Centre, University of Toronto, Toronto, Canada"],"affiliations":[{"raw_affiliation_string":"School of Biological Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran","institution_ids":["https://openalex.org/I4210146419"]},{"raw_affiliation_string":"The Donnelly Centre, University of Toronto, Toronto, Canada","institution_ids":["https://openalex.org/I185261750"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049165296","display_name":"Vahid Gazestani","orcid":"https://orcid.org/0000-0002-1717-7158"},"institutions":[{"id":"https://openalex.org/I5023651","display_name":"McGill University","ror":"https://ror.org/01pxwe438","country_code":"CA","type":"education","lineage":["https://openalex.org/I5023651"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Vahid H Gazestani","raw_affiliation_strings":["Institute of Parasitology, McGill University, Montreal, QC Canada","Institute of Parasitology, McGill University, Montreal, Canada"],"affiliations":[{"raw_affiliation_string":"Institute of Parasitology, McGill University, Montreal, QC Canada","institution_ids":["https://openalex.org/I5023651"]},{"raw_affiliation_string":"Institute of Parasitology, McGill University, Montreal, Canada","institution_ids":["https://openalex.org/I5023651"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024974658","display_name":"Leila Pirhaji","orcid":"https://orcid.org/0009-0008-7023-0430"},"institutions":[{"id":"https://openalex.org/I23946033","display_name":"University of Tehran","ror":"https://ror.org/05vf56z40","country_code":"IR","type":"education","lineage":["https://openalex.org/I23946033"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Leila Pirhaji","raw_affiliation_strings":["Department of Biotechnology, College of Science, University of Tehran, Tehran, Iran"],"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, College of Science, University of Tehran, Tehran, Iran","institution_ids":["https://openalex.org/I23946033"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021962959","display_name":"Brian K. Law","orcid":"https://orcid.org/0000-0002-8411-6531"},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Brian Law","raw_affiliation_strings":["Department of Computer Science, University of Toronto, Toronto, Canada","The Donnelly Centre, University of Toronto, Toronto, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Toronto, Toronto, Canada","institution_ids":["https://openalex.org/I185261750"]},{"raw_affiliation_string":"The Donnelly Centre, University of Toronto, Toronto, Canada","institution_ids":["https://openalex.org/I185261750"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012288522","display_name":"Mehdi Sadeghi","orcid":"https://orcid.org/0000-0001-6704-4591"},"institutions":[{"id":"https://openalex.org/I4210146419","display_name":"Institute for Research in Fundamental Sciences","ror":"https://ror.org/04xreqs31","country_code":"IR","type":"facility","lineage":["https://openalex.org/I4210146419"]},{"id":"https://openalex.org/I4210137727","display_name":"National Institute of Genetic Engineering and Biotechnology","ror":"https://ror.org/03ckh6215","country_code":"IR","type":"facility","lineage":["https://openalex.org/I4210137727"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Mehdi Sadeghi","raw_affiliation_strings":["National Institute of Genetic Engineering and Biotechnology, Tehran, Iran","School of Biological Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran"],"affiliations":[{"raw_affiliation_string":"National Institute of Genetic Engineering and Biotechnology, Tehran, Iran","institution_ids":["https://openalex.org/I4210137727"]},{"raw_affiliation_string":"School of Biological Sciences, Institute for Research in Fundamental Sciences (IPM), Tehran, Iran","institution_ids":["https://openalex.org/I4210146419"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103250852","display_name":"Bahram Goliaei","orcid":"https://orcid.org/0000-0002-4640-9923"},"institutions":[{"id":"https://openalex.org/I23946033","display_name":"University of Tehran","ror":"https://ror.org/05vf56z40","country_code":"IR","type":"education","lineage":["https://openalex.org/I23946033"]}],"countries":["IR"],"is_corresponding":false,"raw_author_name":"Bahram Goliaei","raw_affiliation_strings":["Department of Bioinformatics, Institute of Biochemistry and Biophysics (IBB), University of Tehran, Tehran, Iran"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Institute of Biochemistry and Biophysics (IBB), University of Tehran, Tehran, Iran","institution_ids":["https://openalex.org/I23946033"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010789029","display_name":"Gary D. Bader","orcid":"https://orcid.org/0000-0003-0185-8861"},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Gary D Bader","raw_affiliation_strings":["The Donnelly Centre, University of Toronto, Toronto, Canada"],"affiliations":[{"raw_affiliation_string":"The Donnelly Centre, University of Toronto, Toronto, Canada","institution_ids":["https://openalex.org/I185261750"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5010789029","https://openalex.org/A5085223970"],"corresponding_institution_ids":["https://openalex.org/I185261750","https://openalex.org/I4210146419"],"apc_list":{"value":1490,"currency":"GBP","value_usd":1827},"apc_paid":{"value":1490,"currency":"GBP","value_usd":1827},"fwci":2.1129,"has_fulltext":true,"cited_by_count":34,"citation_normalized_percentile":{"value":0.87316812,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":99},"biblio":{"volume":"10","issue":"1","first_page":"23","last_page":"23"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.7717257738113403},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6593297719955444},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.534961998462677},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5061275362968445},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.4921928942203522},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.46691325306892395},{"id":"https://openalex.org/keywords/data-type","display_name":"Data type","score":0.45127737522125244},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.4434036612510681},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.436197966337204},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.42323315143585205},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3658601641654968},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.30144721269607544},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.25747162103652954},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.21266809105873108},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13223886489868164}],"concepts":[{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.7717257738113403},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6593297719955444},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.534961998462677},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5061275362968445},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.4921928942203522},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.46691325306892395},{"id":"https://openalex.org/C138958017","wikidata":"https://www.wikidata.org/wiki/Q190087","display_name":"Data type","level":2,"score":0.45127737522125244},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.4434036612510681},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.436197966337204},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.42323315143585205},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3658601641654968},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.30144721269607544},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.25747162103652954},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.21266809105873108},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13223886489868164},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.1186/s13015-015-0054-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13015-015-0054-4","pdf_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/s13015-015-0054-4","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},{"id":"pmid:26157474","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26157474","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for molecular biology : AMB","raw_type":null},{"id":"pmh:oai:utoronto.scholaris.ca:1807/83824","is_oa":true,"landing_page_url":"http://hdl.handle.net/1807/83824","pdf_url":"https://utoronto.scholaris.ca/bitstreams/f8ed70f3-f945-495e-92ea-74f836f7439f/download","source":{"id":"https://openalex.org/S7407055458","display_name":"TSpace","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:academicworks.cuny.edu:ny_pubs-2210","is_oa":true,"landing_page_url":"https://academicworks.cuny.edu/ny_pubs/1182","pdf_url":null,"source":{"id":"https://openalex.org/S4377196304","display_name":"CUNY Academic Works (City University of New York)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I174216632","host_organization_name":"City University of New York","host_organization_lineage":["https://openalex.org/I174216632"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Publications and Research","raw_type":"article"},{"id":"pmh:oai:localhost:1807/83824","is_oa":false,"landing_page_url":"http://doi.org/10.1186/s13015-015-0054-4","pdf_url":null,"source":{"id":"https://openalex.org/S4306400261","display_name":"TSpace (University of Toronto)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I185261750","host_organization_name":"University of Toronto","host_organization_lineage":["https://openalex.org/I185261750"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4495944","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4495944","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Algorithms Mol Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13015-015-0054-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13015-015-0054-4","pdf_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/s13015-015-0054-4","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","score":0.4300000071525574,"id":"https://metadata.un.org/sdg/17"}],"awards":[{"id":"https://openalex.org/G4389354971","display_name":null,"funder_award_id":"Research","funder_id":"https://openalex.org/F4320334506","funder_display_name":"Canadian Institutes of Health Research"},{"id":"https://openalex.org/G4412323338","display_name":null,"funder_award_id":"GM103504","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5180836318","display_name":null,"funder_award_id":"GM10350","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5298496832","display_name":null,"funder_award_id":"P41 GM103504","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5507522220","display_name":null,"funder_award_id":"P41 GM103504","funder_id":"https://openalex.org/F4320337375","funder_display_name":"National Center for Research Resources"}],"funders":[{"id":"https://openalex.org/F4320323645","display_name":"Institute for Research in Fundamental Sciences","ror":"https://ror.org/04xreqs31"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320334506","display_name":"Canadian Institutes of Health Research","ror":"https://ror.org/01gavpb45"},{"id":"https://openalex.org/F4320337375","display_name":"National Center for Research Resources","ror":"https://ror.org/04pw6fb54"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2117719890.pdf","grobid_xml":"https://content.openalex.org/works/W2117719890.grobid-xml"},"referenced_works_count":64,"referenced_works":["https://openalex.org/W62465263","https://openalex.org/W1509562192","https://openalex.org/W1567337592","https://openalex.org/W1599969036","https://openalex.org/W1635484243","https://openalex.org/W1966327575","https://openalex.org/W1968445925","https://openalex.org/W1978469373","https://openalex.org/W1987782593","https://openalex.org/W1992452843","https://openalex.org/W2007471837","https://openalex.org/W2021574122","https://openalex.org/W2027287962","https://openalex.org/W2029566195","https://openalex.org/W2029913369","https://openalex.org/W2034784092","https://openalex.org/W2038797068","https://openalex.org/W2044525257","https://openalex.org/W2055967751","https://openalex.org/W2056575133","https://openalex.org/W2057536311","https://openalex.org/W2060705109","https://openalex.org/W2063610889","https://openalex.org/W2073431334","https://openalex.org/W2078149659","https://openalex.org/W2078450879","https://openalex.org/W2080722576","https://openalex.org/W2082736597","https://openalex.org/W2083886415","https://openalex.org/W2086672869","https://openalex.org/W2086781725","https://openalex.org/W2093025056","https://openalex.org/W2106945333","https://openalex.org/W2107289862","https://openalex.org/W2108990971","https://openalex.org/W2122708083","https://openalex.org/W2127057035","https://openalex.org/W2133254377","https://openalex.org/W2133747068","https://openalex.org/W2138720219","https://openalex.org/W2139199642","https://openalex.org/W2144738674","https://openalex.org/W2145506897","https://openalex.org/W2150926065","https://openalex.org/W2159675211","https://openalex.org/W2160450758","https://openalex.org/W2160875291","https://openalex.org/W2160993017","https://openalex.org/W2161409973","https://openalex.org/W2161868542","https://openalex.org/W2162142896","https://openalex.org/W2162870748","https://openalex.org/W2163296115","https://openalex.org/W2163563958","https://openalex.org/W2255980159","https://openalex.org/W2423614648","https://openalex.org/W2528271650","https://openalex.org/W2803437449","https://openalex.org/W3099289621","https://openalex.org/W3143899589","https://openalex.org/W3146003712","https://openalex.org/W4245024447","https://openalex.org/W4298266977","https://openalex.org/W4299551239"],"related_works":["https://openalex.org/W2158714033","https://openalex.org/W4386628104","https://openalex.org/W78967844","https://openalex.org/W3213185671","https://openalex.org/W2509687359","https://openalex.org/W4206945140","https://openalex.org/W2130939068","https://openalex.org/W2135896045","https://openalex.org/W3163717165","https://openalex.org/W2114466827"],"abstract_inverted_index":{"SIREN":[0],"is":[1,11],"an":[2],"efficient":[3],"algorithm":[4],"with":[5],"low":[6],"computational":[7],"complexity;":[8],"hence,":[9],"it":[10],"applicable":[12],"to":[13],"large":[14],"biological":[15],"networks.":[16],"It":[17],"can":[18],"serve":[19],"as":[20],"a":[21,25],"complementary":[22],"approach":[23],"for":[24],"wide":[26],"range":[27],"of":[28],"network":[29],"reconstruction":[30],"methods":[31],"that":[32],"do":[33],"not":[34],"provide":[35],"information":[36],"about":[37],"the":[38],"interaction":[39],"type.":[40]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2}],"updated_date":"2026-04-15T08:11:43.952461","created_date":"2025-10-10T00:00:00"}
