{"id":"https://openalex.org/W2163879391","doi":"https://doi.org/10.1186/s13015-015-0033-9","title":"Algorithmic approaches to protein-protein interaction site prediction","display_name":"Algorithmic approaches to protein-protein interaction site prediction","publication_year":2015,"publication_date":"2015-02-15","ids":{"openalex":"https://openalex.org/W2163879391","doi":"https://doi.org/10.1186/s13015-015-0033-9","mag":"2163879391","pmid":"https://pubmed.ncbi.nlm.nih.gov/25713596"},"language":"en","primary_location":{"id":"doi:10.1186/s13015-015-0033-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13015-015-0033-9","pdf_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/s13015-015-0033-9","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/s13015-015-0033-9","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063826076","display_name":"Tristan Aumentado\u2010Armstrong","orcid":"https://orcid.org/0000-0003-4876-7246"},"institutions":[{"id":"https://openalex.org/I5023651","display_name":"McGill University","ror":"https://ror.org/01pxwe438","country_code":"CA","type":"education","lineage":["https://openalex.org/I5023651"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Tristan T Aumentado-Armstrong","raw_affiliation_strings":["Department of Anatomy and Cell Biology, McGill University, Montreal, Canada","School of Computer Science, McGill University, Montreal, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Anatomy and Cell Biology, McGill University, Montreal, Canada","institution_ids":["https://openalex.org/I5023651"]},{"raw_affiliation_string":"School of Computer Science, McGill University, Montreal, Canada","institution_ids":["https://openalex.org/I5023651"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010894472","display_name":"Bogdan Istrate","orcid":null},"institutions":[{"id":"https://openalex.org/I5023651","display_name":"McGill University","ror":"https://ror.org/01pxwe438","country_code":"CA","type":"education","lineage":["https://openalex.org/I5023651"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Bogdan Istrate","raw_affiliation_strings":["Department of Anatomy and Cell Biology, McGill University, Montreal, Canada","School of Computer Science, McGill University, Montreal, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Anatomy and Cell Biology, McGill University, Montreal, Canada","institution_ids":["https://openalex.org/I5023651"]},{"raw_affiliation_string":"School of Computer Science, McGill University, Montreal, Canada","institution_ids":["https://openalex.org/I5023651"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5001864293","display_name":"Robert A. Murgita","orcid":null},"institutions":[{"id":"https://openalex.org/I5023651","display_name":"McGill University","ror":"https://ror.org/01pxwe438","country_code":"CA","type":"education","lineage":["https://openalex.org/I5023651"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Robert A Murgita","raw_affiliation_strings":["Department of Microbiology and Immunology, McGill University, Montreal, Canada"],"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Immunology, McGill University, Montreal, Canada","institution_ids":["https://openalex.org/I5023651"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5001864293"],"corresponding_institution_ids":["https://openalex.org/I5023651"],"apc_list":{"value":1490,"currency":"GBP","value_usd":1827},"apc_paid":{"value":1490,"currency":"GBP","value_usd":1827},"fwci":8.7569,"has_fulltext":true,"cited_by_count":63,"citation_normalized_percentile":{"value":0.98261994,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"10","issue":"1","first_page":"7","last_page":"7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9882000088691711,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7708606719970703},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6031187772750854},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.4959045350551605},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.48984000086784363},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4202749729156494},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.35276269912719727},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3509412705898285},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.08708703517913818}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7708606719970703},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6031187772750854},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.4959045350551605},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.48984000086784363},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4202749729156494},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.35276269912719727},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3509412705898285},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.08708703517913818},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/s13015-015-0033-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13015-015-0033-9","pdf_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/s13015-015-0033-9","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},{"id":"pmid:25713596","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25713596","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for molecular biology : AMB","raw_type":null},{"id":"pmh:oai:europepmc.org:3303589","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4338852","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s13015-015-0033-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s13015-015-0033-9","pdf_url":"https://almob.biomedcentral.com/counter/pdf/10.1186/s13015-015-0033-9","source":{"id":"https://openalex.org/S205663195","display_name":"Algorithms for Molecular Biology","issn_l":"1748-7188","issn":["1748-7188"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Algorithms for Molecular Biology","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.6600000262260437,"display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2163879391.pdf","grobid_xml":"https://content.openalex.org/works/W2163879391.grobid-xml"},"referenced_works_count":299,"referenced_works":["https://openalex.org/W2169610","https://openalex.org/W34482235","https://openalex.org/W582864414","https://openalex.org/W1486234769","https://openalex.org/W1508885706","https://openalex.org/W1513618424","https://openalex.org/W1533544838","https://openalex.org/W1534406401","https://openalex.org/W1554593697","https://openalex.org/W1577841048","https://openalex.org/W1577892110","https://openalex.org/W1583837637","https://openalex.org/W1792685479","https://openalex.org/W1877203705","https://openalex.org/W1881647329","https://openalex.org/W1926568554","https://openalex.org/W1928755576","https://openalex.org/W1933777541","https://openalex.org/W1965582988","https://openalex.org/W1967005434","https://openalex.org/W1969327849","https://openalex.org/W1969842170","https://openalex.org/W1970188140","https://openalex.org/W1971722050","https://openalex.org/W1973035681","https://openalex.org/W1973231190","https://openalex.org/W1973951655","https://openalex.org/W1973964562","https://openalex.org/W1974156712","https://openalex.org/W1974410851","https://openalex.org/W1974499817","https://openalex.org/W1974987674","https://openalex.org/W1975745939","https://openalex.org/W1977278302","https://openalex.org/W1977845138","https://openalex.org/W1978763597","https://openalex.org/W1981350256","https://openalex.org/W1984753195","https://openalex.org/W1985153601","https://openalex.org/W1985222378","https://openalex.org/W1985481261","https://openalex.org/W1987749411","https://openalex.org/W1987869189","https://openalex.org/W1988422871","https://openalex.org/W1988644414","https://openalex.org/W1993279060","https://openalex.org/W1993646374","https://openalex.org/W1995043982","https://openalex.org/W1995875735","https://openalex.org/W1996160970","https://openalex.org/W1996559970","https://openalex.org/W1996835973","https://openalex.org/W1996878607","https://openalex.org/W1998225576","https://openalex.org/W2000980755","https://openalex.org/W2001619934","https://openalex.org/W2002396472","https://openalex.org/W2002449583","https://openalex.org/W2005870641","https://openalex.org/W2006421122","https://openalex.org/W2007451197","https://openalex.org/W2008067788","https://openalex.org/W2008708467","https://openalex.org/W2009664421","https://openalex.org/W2010244302","https://openalex.org/W2010461536","https://openalex.org/W2010535661","https://openalex.org/W2012104865","https://openalex.org/W2013863297","https://openalex.org/W2013988051","https://openalex.org/W2014499409","https://openalex.org/W2014731953","https://openalex.org/W2014744153","https://openalex.org/W2015059765","https://openalex.org/W2015094506","https://openalex.org/W2015357376","https://openalex.org/W2016170088","https://openalex.org/W2017519756","https://openalex.org/W2017619931","https://openalex.org/W2021213676","https://openalex.org/W2021389024","https://openalex.org/W2021703339","https://openalex.org/W2023170820","https://openalex.org/W2023490488","https://openalex.org/W2025091441","https://openalex.org/W2025120281","https://openalex.org/W2026350435","https://openalex.org/W2026649090","https://openalex.org/W2028820256","https://openalex.org/W2029582401","https://openalex.org/W2029949252","https://openalex.org/W2031772330","https://openalex.org/W2033855745","https://openalex.org/W2034256925","https://openalex.org/W2035503835","https://openalex.org/W2038360534","https://openalex.org/W2038403313","https://openalex.org/W2039007526","https://openalex.org/W2039092320","https://openalex.org/W2040074453","https://openalex.org/W2041673942","https://openalex.org/W2042469522","https://openalex.org/W2042730255","https://openalex.org/W2043338013","https://openalex.org/W2043699100","https://openalex.org/W2043856744","https://openalex.org/W2044359120","https://openalex.org/W2046407284","https://openalex.org/W2047468595","https://openalex.org/W2051380891","https://openalex.org/W2051640364","https://openalex.org/W2051710717","https://openalex.org/W2051872583","https://openalex.org/W2053448121","https://openalex.org/W2053538195","https://openalex.org/W2055043387","https://openalex.org/W2056034415","https://openalex.org/W2056124433","https://openalex.org/W2057664120","https://openalex.org/W2057813163","https://openalex.org/W2058017150","https://openalex.org/W2059446387","https://openalex.org/W2059830677","https://openalex.org/W2060791849","https://openalex.org/W2062414926","https://openalex.org/W2062858001","https://openalex.org/W2065921821","https://openalex.org/W2066271699","https://openalex.org/W2068645964","https://openalex.org/W2070506154","https://openalex.org/W2071128523","https://openalex.org/W2071704671","https://openalex.org/W2072284383","https://openalex.org/W2073229442","https://openalex.org/W2073745520","https://openalex.org/W2074719974","https://openalex.org/W2075770210","https://openalex.org/W2076095273","https://openalex.org/W2076911240","https://openalex.org/W2077235131","https://openalex.org/W2078302553","https://openalex.org/W2085277871","https://openalex.org/W2086361102","https://openalex.org/W2087574732","https://openalex.org/W2089355842","https://openalex.org/W2090699441","https://openalex.org/W2091710329","https://openalex.org/W2092189515","https://openalex.org/W2092387745","https://openalex.org/W2092676377","https://openalex.org/W2093689899","https://openalex.org/W2094148990","https://openalex.org/W2095521702","https://openalex.org/W2095844239","https://openalex.org/W2096495474","https://openalex.org/W2097452095","https://openalex.org/W2097606916","https://openalex.org/W2097651291","https://openalex.org/W2097697746","https://openalex.org/W2097706568","https://openalex.org/W2099111195","https://openalex.org/W2099173559","https://openalex.org/W2099254366","https://openalex.org/W2100070946","https://openalex.org/W2100495367","https://openalex.org/W2101330776","https://openalex.org/W2101600610","https://openalex.org/W2101897555","https://openalex.org/W2103012681","https://openalex.org/W2103210604","https://openalex.org/W2103485392","https://openalex.org/W2103537992","https://openalex.org/W2103546861","https://openalex.org/W2104529244","https://openalex.org/W2104760790","https://openalex.org/W2105438341","https://openalex.org/W2106030336","https://openalex.org/W2107432340","https://openalex.org/W2108445825","https://openalex.org/W2109300715","https://openalex.org/W2109553965","https://openalex.org/W2113985551","https://openalex.org/W2114886480","https://openalex.org/W2115410056","https://openalex.org/W2115592403","https://openalex.org/W2116099439","https://openalex.org/W2117744495","https://openalex.org/W2118737745","https://openalex.org/W2119821739","https://openalex.org/W2120744225","https://openalex.org/W2120781377","https://openalex.org/W2120881407","https://openalex.org/W2121166097","https://openalex.org/W2122884883","https://openalex.org/W2123375001","https://openalex.org/W2124887510","https://openalex.org/W2125725297","https://openalex.org/W2126000809","https://openalex.org/W2126414848","https://openalex.org/W2126755078","https://openalex.org/W2130390259","https://openalex.org/W2130606742","https://openalex.org/W2130754579","https://openalex.org/W2130832525","https://openalex.org/W2131473950","https://openalex.org/W2131987814","https://openalex.org/W2132251183","https://openalex.org/W2132395520","https://openalex.org/W2133591516","https://openalex.org/W2135197754","https://openalex.org/W2135703599","https://openalex.org/W2136206140","https://openalex.org/W2136525667","https://openalex.org/W2136832587","https://openalex.org/W2136845897","https://openalex.org/W2137991504","https://openalex.org/W2138104170","https://openalex.org/W2138905138","https://openalex.org/W2138913459","https://openalex.org/W2140095548","https://openalex.org/W2140615634","https://openalex.org/W2141627824","https://openalex.org/W2142796125","https://openalex.org/W2143210482","https://openalex.org/W2143251450","https://openalex.org/W2143881057","https://openalex.org/W2143908786","https://openalex.org/W2144627403","https://openalex.org/W2147974023","https://openalex.org/W2148219066","https://openalex.org/W2148654450","https://openalex.org/W2148768886","https://openalex.org/W2150444353","https://openalex.org/W2151311229","https://openalex.org/W2151875636","https://openalex.org/W2152521138","https://openalex.org/W2153110463","https://openalex.org/W2153153865","https://openalex.org/W2153606085","https://openalex.org/W2153983456","https://openalex.org/W2154053567","https://openalex.org/W2154813243","https://openalex.org/W2155194485","https://openalex.org/W2155653793","https://openalex.org/W2156125289","https://openalex.org/W2156269526","https://openalex.org/W2156571267","https://openalex.org/W2156678798","https://openalex.org/W2157576293","https://openalex.org/W2158100564","https://openalex.org/W2158698691","https://openalex.org/W2158714788","https://openalex.org/W2158781610","https://openalex.org/W2158919479","https://openalex.org/W2159300273","https://openalex.org/W2160690759","https://openalex.org/W2161337380","https://openalex.org/W2161975439","https://openalex.org/W2162388472","https://openalex.org/W2162402626","https://openalex.org/W2162574056","https://openalex.org/W2162682281","https://openalex.org/W2163352757","https://openalex.org/W2163561348","https://openalex.org/W2163614321","https://openalex.org/W2165181282","https://openalex.org/W2165214884","https://openalex.org/W2165962877","https://openalex.org/W2166233246","https://openalex.org/W2166496883","https://openalex.org/W2166735471","https://openalex.org/W2166814967","https://openalex.org/W2167153784","https://openalex.org/W2167283099","https://openalex.org/W2167315103","https://openalex.org/W2167460663","https://openalex.org/W2169650425","https://openalex.org/W2170872475","https://openalex.org/W2500316739","https://openalex.org/W2605068739","https://openalex.org/W2611775752","https://openalex.org/W2612085100","https://openalex.org/W2911964244","https://openalex.org/W2912934387","https://openalex.org/W2914782308","https://openalex.org/W2915344963","https://openalex.org/W2949287246","https://openalex.org/W3037058914","https://openalex.org/W3099514962","https://openalex.org/W3182520187","https://openalex.org/W3207342693","https://openalex.org/W4212920271","https://openalex.org/W4213345021","https://openalex.org/W4233413206","https://openalex.org/W4239198058","https://openalex.org/W4239403073","https://openalex.org/W4293003482","https://openalex.org/W4300402905","https://openalex.org/W6630820455"],"related_works":["https://openalex.org/W2898732673","https://openalex.org/W2410053581","https://openalex.org/W2383658677","https://openalex.org/W3123203398","https://openalex.org/W2961085424","https://openalex.org/W623104033","https://openalex.org/W1972473893","https://openalex.org/W2466435674","https://openalex.org/W2938786841","https://openalex.org/W2765200542"],"abstract_inverted_index":{"Interaction":[0],"sites":[1,29],"on":[2,152],"protein":[3],"surfaces":[4],"mediate":[5],"virtually":[6],"all":[7],"biological":[8,71,126],"activities,":[9],"and":[10,18,37,61,74,84,93,112,121,175],"their":[11,94,115,122,149],"identification":[12,167],"holds":[13,168],"promise":[14],"for":[15,24,77,114,158,169,189],"disease":[16],"treatment":[17],"drug":[19,171],"design.":[20],"Novel":[21],"algorithmic":[22],"approaches":[23],"the":[25,38,45,49,67,70,90,97,118,125,139,153,162,185,193],"prediction":[26,144],"of":[27,69,89,100,128,138,184,192],"these":[28],"have":[30,53],"been":[31,56],"produced":[32],"at":[33],"a":[34,59,136],"rapid":[35],"rate,":[36],"field":[39,194],"has":[40],"seen":[41],"significant":[42],"advancement":[43],"over":[44],"past":[46],"decade.":[47],"However,":[48],"most":[50,155,186],"current":[51],"methods":[52,113],"not":[54],"yet":[55],"reviewed":[57],"in":[58,124,142],"systematic":[60],"comprehensive":[62],"fashion.":[63],"Herein,":[64],"we":[65],"describe":[66],"intricacies":[68],"theory,":[72],"datasets,":[73],"features":[75,119],"required":[76],"modern":[78],"protein-protein":[79],"interaction":[80],"site":[81],"(PPIS)":[82],"prediction,":[83,174],"present":[85],"an":[86,182],"integrative":[87],"analysis":[88,183],"state-of-the-art":[91],"algorithms":[92],"performance.":[95],"First,":[96],"major":[98],"sources":[99],"data":[101],"used":[102,157],"by":[103,135],"predictors":[104],"are":[105,130],"reviewed,":[106],"including":[107],"training":[108],"sets,":[109,111],"evaluation":[110],"procurement.":[116],"Then,":[117],"employed":[120],"importance":[123],"characterization":[127],"PPISs":[129],"explored.":[131],"This":[132],"is":[133,179,195],"followed":[134],"discussion":[137],"methodologies":[140],"adopted":[141],"contemporary":[143],"programs,":[145],"as":[146,148],"well":[147],"relative":[150],"performance":[151],"datasets":[154],"recently":[156],"evaluation.":[159],"In":[160],"addition,":[161],"potential":[163],"utility":[164],"that":[165],"PPIS":[166],"rational":[170],"design,":[172],"hotspot":[173],"computational":[176],"molecular":[177],"docking":[178],"described.":[180],"Finally,":[181],"promising":[187],"areas":[188],"future":[190],"development":[191],"presented.":[196]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":11},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":8},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":3}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
