{"id":"https://openalex.org/W2775998237","doi":"https://doi.org/10.1186/s12918-017-0511-4","title":"MDD-carb: a combinatorial model for the identification of protein carbonylation sites with substrate motifs","display_name":"MDD-carb: a combinatorial model for the identification of protein carbonylation sites with substrate motifs","publication_year":2017,"publication_date":"2017-12-01","ids":{"openalex":"https://openalex.org/W2775998237","doi":"https://doi.org/10.1186/s12918-017-0511-4","mag":"2775998237","pmid":"https://pubmed.ncbi.nlm.nih.gov/29322938"},"language":"en","primary_location":{"id":"doi:10.1186/s12918-017-0511-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-017-0511-4","pdf_url":"https://bmcsystbiol.biomedcentral.com/track/pdf/10.1186/s12918-017-0511-4","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://bmcsystbiol.biomedcentral.com/track/pdf/10.1186/s12918-017-0511-4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072614793","display_name":"Hui\u2010Ju Kao","orcid":null},"institutions":[{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Hui-Ju Kao","raw_affiliation_strings":["Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, city, 320, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, city, 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034954530","display_name":"Shun\u2010Long Weng","orcid":null},"institutions":[{"id":"https://openalex.org/I2802753785","display_name":"Mackay Memorial Hospital","ror":"https://ror.org/015b6az38","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I2802753785"]},{"id":"https://openalex.org/I35926432","display_name":"Mackay Medical College","ror":"https://ror.org/00t89kj24","country_code":"TW","type":"education","lineage":["https://openalex.org/I35926432"]},{"id":"https://openalex.org/I4210127821","display_name":"Mackay Junior College of Medicine, Nursing and Management","ror":"https://ror.org/03j9dwf95","country_code":"TW","type":"education","lineage":["https://openalex.org/I4210127821"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Shun-Long Weng","raw_affiliation_strings":["Department of Medicine, Mackay Medical College, New Taipei City, 252, Taiwan","Department of Obstetrics and Gynecology, Hsinchu Mackay Memorial Hospital, Hsinchu, city, 300, Taiwan","Mackay Junior College of Medicine, Nursing and Management, Taipei, city, 112, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Medicine, Mackay Medical College, New Taipei City, 252, Taiwan","institution_ids":["https://openalex.org/I35926432"]},{"raw_affiliation_string":"Department of Obstetrics and Gynecology, Hsinchu Mackay Memorial Hospital, Hsinchu, city, 300, Taiwan","institution_ids":["https://openalex.org/I2802753785"]},{"raw_affiliation_string":"Mackay Junior College of Medicine, Nursing and Management, Taipei, city, 112, Taiwan","institution_ids":["https://openalex.org/I4210127821"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101875147","display_name":"Kai\u2010Yao Huang","orcid":"https://orcid.org/0000-0001-9855-1035"},"institutions":[{"id":"https://openalex.org/I2802753785","display_name":"Mackay Memorial Hospital","ror":"https://ror.org/015b6az38","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I2802753785"]},{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Kai-Yao Huang","raw_affiliation_strings":["Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, city, 320, Taiwan","Department of Medical Research, Hsinchu Mackay Memorial Hospital, Hsinchu, city, 300, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, city, 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]},{"raw_affiliation_string":"Department of Medical Research, Hsinchu Mackay Memorial Hospital, Hsinchu, city, 300, Taiwan","institution_ids":["https://openalex.org/I2802753785"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046036453","display_name":"Fergie Joanda Kaunang","orcid":null},"institutions":[{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Fergie Joanda Kaunang","raw_affiliation_strings":["Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, city, 320, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, city, 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013309172","display_name":"Justin Bo\u2010Kai Hsu","orcid":null},"institutions":[{"id":"https://openalex.org/I2802331550","display_name":"Taipei Medical University Hospital","ror":"https://ror.org/03k0md330","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I2802331550"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Justin Bo-Kai Hsu","raw_affiliation_strings":["Department of Medical Research, Taipei Medical University Hospital, Taipei, city, 110, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Medical Research, Taipei Medical University Hospital, Taipei, city, 110, Taiwan","institution_ids":["https://openalex.org/I2802331550"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022839686","display_name":"Chien\u2010Hsun Huang","orcid":"https://orcid.org/0000-0003-2268-1161"},"institutions":[{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chien-Hsun Huang","raw_affiliation_strings":["Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, city, 320, Taiwan. lithsunh@gmail.com","Tao-Yuan Hospital, Ministry of Health & Welfare, Taoyuan, 320, Taiwan. lithsunh@gmail.com","Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, city, 320, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, city, 320, Taiwan. lithsunh@gmail.com","institution_ids":[]},{"raw_affiliation_string":"Tao-Yuan Hospital, Ministry of Health & Welfare, Taoyuan, 320, Taiwan. lithsunh@gmail.com","institution_ids":[]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, city, 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5045675277","display_name":"Tzong-Yi Lee","orcid":"https://orcid.org/0000-0001-8475-7868"},"institutions":[{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Tzong-Yi Lee","raw_affiliation_strings":["Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, city, 320, Taiwan. francis@saturn.yzu.edu.tw","Innovation Center for Big Data and Digital Convergence, Yuan Ze University, Taoyuan, 320, Taiwan. francis@saturn.yzu.edu.tw","Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, city, 320, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, city, 320, Taiwan. francis@saturn.yzu.edu.tw","institution_ids":[]},{"raw_affiliation_string":"Innovation Center for Big Data and Digital Convergence, Yuan Ze University, Taoyuan, 320, Taiwan. francis@saturn.yzu.edu.tw","institution_ids":[]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, city, 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5072614793"],"corresponding_institution_ids":["https://openalex.org/I99908691"],"apc_list":null,"apc_paid":null,"fwci":1.2309,"has_fulltext":true,"cited_by_count":25,"citation_normalized_percentile":{"value":0.79607197,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"11","issue":"S7","first_page":"137","last_page":"137"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11561","display_name":"Protein Hydrolysis and Bioactive Peptides","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/protein-carbonylation","display_name":"Protein Carbonylation","score":0.6631252765655518},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5846491456031799},{"id":"https://openalex.org/keywords/amino-acid","display_name":"Amino acid","score":0.5157342553138733},{"id":"https://openalex.org/keywords/carbonylation","display_name":"Carbonylation","score":0.437175989151001},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.4265420436859131},{"id":"https://openalex.org/keywords/motif","display_name":"Motif (music)","score":0.42276573181152344},{"id":"https://openalex.org/keywords/hidden-markov-model","display_name":"Hidden Markov model","score":0.4225977063179016},{"id":"https://openalex.org/keywords/pseudo-amino-acid-composition","display_name":"Pseudo amino acid composition","score":0.4188953936100006},{"id":"https://openalex.org/keywords/lysine","display_name":"Lysine","score":0.41442734003067017},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3864472806453705},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.37008845806121826},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.33388468623161316},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3031045198440552},{"id":"https://openalex.org/keywords/oxidative-damage","display_name":"Oxidative damage","score":0.15324869751930237},{"id":"https://openalex.org/keywords/oxidative-stress","display_name":"Oxidative stress","score":0.08855026960372925}],"concepts":[{"id":"https://openalex.org/C2911203004","wikidata":"https://www.wikidata.org/wiki/Q105409450","display_name":"Protein Carbonylation","level":4,"score":0.6631252765655518},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5846491456031799},{"id":"https://openalex.org/C515207424","wikidata":"https://www.wikidata.org/wiki/Q8066","display_name":"Amino acid","level":2,"score":0.5157342553138733},{"id":"https://openalex.org/C168382676","wikidata":"https://www.wikidata.org/wiki/Q900377","display_name":"Carbonylation","level":4,"score":0.437175989151001},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.4265420436859131},{"id":"https://openalex.org/C32276052","wikidata":"https://www.wikidata.org/wiki/Q908349","display_name":"Motif (music)","level":2,"score":0.42276573181152344},{"id":"https://openalex.org/C23224414","wikidata":"https://www.wikidata.org/wiki/Q176769","display_name":"Hidden Markov model","level":2,"score":0.4225977063179016},{"id":"https://openalex.org/C2780362125","wikidata":"https://www.wikidata.org/wiki/Q7254464","display_name":"Pseudo amino acid composition","level":4,"score":0.4188953936100006},{"id":"https://openalex.org/C2776016237","wikidata":"https://www.wikidata.org/wiki/Q178430","display_name":"Lysine","level":3,"score":0.41442734003067017},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3864472806453705},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.37008845806121826},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.33388468623161316},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3031045198440552},{"id":"https://openalex.org/C3020296196","wikidata":"https://www.wikidata.org/wiki/Q898814","display_name":"Oxidative damage","level":3,"score":0.15324869751930237},{"id":"https://openalex.org/C2776151105","wikidata":"https://www.wikidata.org/wiki/Q898814","display_name":"Oxidative stress","level":2,"score":0.08855026960372925},{"id":"https://openalex.org/C2779138802","wikidata":"https://www.wikidata.org/wiki/Q418602","display_name":"Dipeptide","level":3,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C161790260","wikidata":"https://www.wikidata.org/wiki/Q82264","display_name":"Catalysis","level":2,"score":0.0},{"id":"https://openalex.org/C512735826","wikidata":"https://www.wikidata.org/wiki/Q2025","display_name":"Carbon monoxide","level":3,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D050050","descriptor_name":"Protein Carbonylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D050050","descriptor_name":"Protein Carbonylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D050050","descriptor_name":"Protein Carbonylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12918-017-0511-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-017-0511-4","pdf_url":"https://bmcsystbiol.biomedcentral.com/track/pdf/10.1186/s12918-017-0511-4","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:29322938","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29322938","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:doaj.org/article:4d39d881cfc04a7a9aaa2e76dc27c2d5","is_oa":true,"landing_page_url":"https://doaj.org/article/4d39d881cfc04a7a9aaa2e76dc27c2d5","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Systems Biology, Vol 11, Iss S7, Pp 127-140 (2017)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:5763492","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5763492","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Syst Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12918-017-0511-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-017-0511-4","pdf_url":"https://bmcsystbiol.biomedcentral.com/track/pdf/10.1186/s12918-017-0511-4","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2775998237.pdf","grobid_xml":"https://content.openalex.org/works/W2775998237.grobid-xml"},"referenced_works_count":58,"referenced_works":["https://openalex.org/W1968938163","https://openalex.org/W1969051510","https://openalex.org/W1970039616","https://openalex.org/W1970330854","https://openalex.org/W1984537356","https://openalex.org/W1988281953","https://openalex.org/W1990125034","https://openalex.org/W1993456044","https://openalex.org/W1994351798","https://openalex.org/W1994431202","https://openalex.org/W1994924724","https://openalex.org/W1999212541","https://openalex.org/W2001656580","https://openalex.org/W2009832280","https://openalex.org/W2020035566","https://openalex.org/W2028201899","https://openalex.org/W2030640979","https://openalex.org/W2031235464","https://openalex.org/W2034890309","https://openalex.org/W2048793518","https://openalex.org/W2057981766","https://openalex.org/W2059643569","https://openalex.org/W2060944967","https://openalex.org/W2067563184","https://openalex.org/W2075319133","https://openalex.org/W2080221075","https://openalex.org/W2087756678","https://openalex.org/W2089989707","https://openalex.org/W2094509624","https://openalex.org/W2097606916","https://openalex.org/W2101745615","https://openalex.org/W2104804534","https://openalex.org/W2123907767","https://openalex.org/W2129137060","https://openalex.org/W2130277691","https://openalex.org/W2134129243","https://openalex.org/W2134724878","https://openalex.org/W2142479026","https://openalex.org/W2148830285","https://openalex.org/W2149298154","https://openalex.org/W2151831732","https://openalex.org/W2153187042","https://openalex.org/W2153635508","https://openalex.org/W2158266834","https://openalex.org/W2158714788","https://openalex.org/W2163577764","https://openalex.org/W2166187656","https://openalex.org/W2170700642","https://openalex.org/W2172609270","https://openalex.org/W2186965150","https://openalex.org/W2217361398","https://openalex.org/W2230399809","https://openalex.org/W2237040395","https://openalex.org/W2281257803","https://openalex.org/W2345938495","https://openalex.org/W2591620035","https://openalex.org/W2603443522","https://openalex.org/W2731898189"],"related_works":["https://openalex.org/W4285234816","https://openalex.org/W1990125034","https://openalex.org/W3209942255","https://openalex.org/W2460513225","https://openalex.org/W2619128443","https://openalex.org/W2031235464","https://openalex.org/W2808898301","https://openalex.org/W4387077146","https://openalex.org/W1895994104","https://openalex.org/W1980291487"],"abstract_inverted_index":{"This":[0],"study":[1,62],"provides":[2],"a":[3],"new":[4],"scheme":[5],"for":[6],"exploring":[7],"potential":[8],"motif":[9],"signatures":[10],"at":[11],"substrate":[12,42],"sites":[13,28],"of":[14,19,26,63],"protein":[15],"carbonylation.":[16],"The":[17],"usefulness":[18],"the":[20,24,61],"revealed":[21],"motifs":[22,43],"in":[23,35],"identification":[25],"carbonylated":[27,65],"is":[29],"demonstrated":[30],"by":[31],"their":[32],"effective":[33],"performance":[34],"cross-validation":[36],"and":[37,55],"independent":[38],"testing.":[39],"Finally,":[40],"these":[41],"were":[44],"adopted":[45],"to":[46,59],"build":[47],"an":[48],"available":[49],"online":[50],"resource":[51],"(MDD-Carb,":[52],"http://csb.cse.yzu.edu.tw/MDDCarb/":[53],")":[54],"are":[56],"also":[57],"anticipated":[58],"facilitate":[60],"large-scale":[64],"proteomes.":[66]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":4}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
