{"id":"https://openalex.org/W2567777922","doi":"https://doi.org/10.1186/s12918-016-0376-y","title":"Coordinated regulation of acid resistance in Escherichia coli","display_name":"Coordinated regulation of acid resistance in Escherichia coli","publication_year":2017,"publication_date":"2017-01-06","ids":{"openalex":"https://openalex.org/W2567777922","doi":"https://doi.org/10.1186/s12918-016-0376-y","mag":"2567777922","pmid":"https://pubmed.ncbi.nlm.nih.gov/28061857"},"language":"en","primary_location":{"id":"doi:10.1186/s12918-016-0376-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-016-0376-y","pdf_url":"https://bmcsystbiol.biomedcentral.com/track/pdf/10.1186/s12918-016-0376-y","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://bmcsystbiol.biomedcentral.com/track/pdf/10.1186/s12918-016-0376-y","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5021156166","display_name":"Patricia Aquino","orcid":"https://orcid.org/0000-0003-1065-4967"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Patricia Aquino","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA","Department of Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]},{"raw_affiliation_string":"Department of Biomedical Engineering, Boston University, Boston, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070846423","display_name":"Brent Honda","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Brent Honda","raw_affiliation_strings":["Department of Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Boston University, Boston, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010060640","display_name":"Suma Jaini","orcid":"https://orcid.org/0000-0001-7853-5652"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Suma Jaini","raw_affiliation_strings":["Department of Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Boston University, Boston, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074311334","display_name":"Anna Lyubetskaya","orcid":"https://orcid.org/0000-0003-2485-3924"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anna Lyubetskaya","raw_affiliation_strings":["Bioinformatics program, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics program, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036053290","display_name":"Krutika Hosur","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Krutika Hosur","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA","Department of Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]},{"raw_affiliation_string":"Department of Biomedical Engineering, Boston University, Boston, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010736089","display_name":"Joanna Chiu","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joanna G. Chiu","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019030204","display_name":"Iriny Ekladious","orcid":"https://orcid.org/0000-0003-1192-1414"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Iriny Ekladious","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112305835","display_name":"Dongjian Hu","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dongjian Hu","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102332458","display_name":"Jin Lin","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lin Jin","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071442735","display_name":"Marianna Sayeg","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marianna K. Sayeg","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087835249","display_name":"Arion Stettner","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Arion I. Stettner","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055033925","display_name":"Julia Wang","orcid":"https://orcid.org/0000-0001-6640-0718"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Julia Wang","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036273960","display_name":"Brandon G. Wong","orcid":"https://orcid.org/0000-0003-1639-7594"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brandon G. Wong","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105839139","display_name":"Winnie Wong","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Winnie S. Wong","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA","Department of Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]},{"raw_affiliation_string":"Department of Biomedical Engineering, Boston University, Boston, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102482136","display_name":"Stephen Alexander","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stephen L. Alexander","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015292851","display_name":"Cong Ba","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cong Ba","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001935578","display_name":"Seth Bensussen","orcid":"https://orcid.org/0000-0001-6516-3482"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Seth I. Bensussen","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076884495","display_name":"David B. Bernstein","orcid":"https://orcid.org/0000-0001-6091-4021"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David B. Bernstein","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037704389","display_name":"Dana Braff","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dana Braff","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028094072","display_name":"Susie Cha","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Susie Cha","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064240250","display_name":"Daniel Cheng","orcid":"https://orcid.org/0000-0003-4464-0061"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel I. Cheng","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109489480","display_name":"Jang Hwan Cho","orcid":"https://orcid.org/0009-0006-4712-9081"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jang Hwan Cho","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081114493","display_name":"Kenny Chou","orcid":"https://orcid.org/0000-0002-8694-8059"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kenny Chou","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031047379","display_name":"James Chuang","orcid":"https://orcid.org/0000-0002-9802-1808"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"James Chuang","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107914646","display_name":"D. Gastler","orcid":"https://orcid.org/0009-0000-7307-6311"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel E. Gastler","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087474113","display_name":"Daniel J. Grasso","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel J. Grasso","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025129752","display_name":"John Greifenberger","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John S. Greifenberger","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100445749","display_name":"Chen Guo","orcid":"https://orcid.org/0009-0000-5266-3971"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chen Guo","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030133340","display_name":"Anna Hawes","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anna K. Hawes","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077288103","display_name":"Divya V. Israni","orcid":"https://orcid.org/0000-0002-6335-8769"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Divya V. Israni","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029673704","display_name":"Saloni R. Jain","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Saloni R. Jain","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101721936","display_name":"Jessica Kim","orcid":"https://orcid.org/0000-0001-9795-2275"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jessica Kim","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025652222","display_name":"Junyu Lei","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Junyu Lei","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100348477","display_name":"Hao Li","orcid":"https://orcid.org/0000-0001-5677-3377"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hao Li","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115588954","display_name":"David Li","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David Li","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100340653","display_name":"Qian Li","orcid":"https://orcid.org/0000-0003-1300-3377"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Qian Li","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091295056","display_name":"Christopher P. Mancuso","orcid":"https://orcid.org/0000-0002-3974-3480"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christopher P. Mancuso","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030960573","display_name":"Ning Mao","orcid":"https://orcid.org/0000-0001-5437-3548"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ning Mao","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031624060","display_name":"Salwa Masud","orcid":"https://orcid.org/0000-0003-2931-7418"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Salwa F. Masud","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091387080","display_name":"Cari Meisel","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cari L. Meisel","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108574594","display_name":"Jing Mi","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jing Mi","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018481589","display_name":"Christine Nykyforchyn","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christine S. Nykyforchyn","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085780797","display_name":"Minhee Park","orcid":"https://orcid.org/0000-0002-2513-2080"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Minhee Park","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070668942","display_name":"Hannah Peterson","orcid":"https://orcid.org/0000-0002-4716-2715"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hannah M. Peterson","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074057465","display_name":"Alfred K. Ramirez","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alfred K. Ramirez","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056073268","display_name":"Daniel S. Reynolds","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel S. Reynolds","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065947914","display_name":"Nae Gyune Rim","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nae Gyune Rim","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083491050","display_name":"Jared Saffie","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jared C. Saffie","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047377288","display_name":"Hang Su","orcid":"https://orcid.org/0000-0003-3030-0509"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hang Su","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016692503","display_name":"Wendell R. Su","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wendell R. Su","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036114846","display_name":"Yaqing Su","orcid":"https://orcid.org/0000-0002-8544-6284"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yaqing Su","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050233590","display_name":"Meng Sun","orcid":"https://orcid.org/0000-0002-5753-2775"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Meng Sun","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041468618","display_name":"Meghan Thommes","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Meghan M. Thommes","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045650547","display_name":"Tao Tu","orcid":"https://orcid.org/0000-0002-1661-0386"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tao Tu","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016377004","display_name":"Nitinun Varongchayakul","orcid":"https://orcid.org/0000-0002-7612-4478"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nitinun Varongchayakul","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101979254","display_name":"Tyler Wagner","orcid":"https://orcid.org/0000-0003-2154-1650"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tyler E. Wagner","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045782161","display_name":"Benjamin H. Weinberg","orcid":"https://orcid.org/0000-0003-2604-2260"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Benjamin H. Weinberg","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003401827","display_name":"Rouhui Yang","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rouhui Yang","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006542868","display_name":"Anastasia Yaroslavsky","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anastasia Yaroslavsky","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015321446","display_name":"Christine Yoon","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christine Yoon","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005223479","display_name":"Yanyu Zhao","orcid":"https://orcid.org/0000-0002-1908-6081"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yanyu Zhao","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026045333","display_name":"Alicia Zollinger","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alicia J. Zollinger","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057105462","display_name":"Anne M. Stringer","orcid":"https://orcid.org/0000-0003-4184-4894"},"institutions":[{"id":"https://openalex.org/I1298060332","display_name":"New York State Department of Health","ror":"https://ror.org/04hf5kq57","country_code":"US","type":"government","lineage":["https://openalex.org/I1298060332"]},{"id":"https://openalex.org/I1339417872","display_name":"Wadsworth Center","ror":"https://ror.org/050kf9c55","country_code":"US","type":"facility","lineage":["https://openalex.org/I1298060332","https://openalex.org/I1339417872"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anne M. Stringer","raw_affiliation_strings":["Wadsworth Center, New York State Department of Health, Albany, NY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Wadsworth Center, New York State Department of Health, Albany, NY, USA","institution_ids":["https://openalex.org/I1298060332","https://openalex.org/I1339417872"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034053792","display_name":"John W. Foster","orcid":"https://orcid.org/0000-0001-5987-2434"},"institutions":[{"id":"https://openalex.org/I83809506","display_name":"University of South Alabama","ror":"https://ror.org/01s7b5y08","country_code":"US","type":"education","lineage":["https://openalex.org/I83809506"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John W. Foster","raw_affiliation_strings":["Department of Microbiology and Immunology, University of South Alabama College of Medicine, Mobile, AL, 36688, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Immunology, University of South Alabama College of Medicine, Mobile, AL, 36688, USA","institution_ids":["https://openalex.org/I83809506"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079671055","display_name":"Joseph T. Wade","orcid":"https://orcid.org/0000-0002-9779-3160"},"institutions":[{"id":"https://openalex.org/I1298060332","display_name":"New York State Department of Health","ror":"https://ror.org/04hf5kq57","country_code":"US","type":"government","lineage":["https://openalex.org/I1298060332"]},{"id":"https://openalex.org/I1339417872","display_name":"Wadsworth Center","ror":"https://ror.org/050kf9c55","country_code":"US","type":"facility","lineage":["https://openalex.org/I1298060332","https://openalex.org/I1339417872"]},{"id":"https://openalex.org/I392282","display_name":"University at Albany, State University of New York","ror":"https://ror.org/012zs8222","country_code":"US","type":"education","lineage":["https://openalex.org/I392282"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Joseph Wade","raw_affiliation_strings":["Department of Biomedical Sciences, University at Albany, Albany, NY, USA","Wadsworth Center, New York State Department of Health, Albany, NY, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Sciences, University at Albany, Albany, NY, USA","institution_ids":["https://openalex.org/I392282"]},{"raw_affiliation_string":"Wadsworth Center, New York State Department of Health, Albany, NY, USA","institution_ids":["https://openalex.org/I1298060332","https://openalex.org/I1339417872"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007394714","display_name":"Sahadaven Raman","orcid":null},"institutions":[{"id":"https://openalex.org/I83809506","display_name":"University of South Alabama","ror":"https://ror.org/01s7b5y08","country_code":"US","type":"education","lineage":["https://openalex.org/I83809506"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sahadaven Raman","raw_affiliation_strings":["Department of Microbiology and Immunology, University of South Alabama College of Medicine, Mobile, AL, 36688, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and Immunology, University of South Alabama College of Medicine, Mobile, AL, 36688, USA","institution_ids":["https://openalex.org/I83809506"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055346841","display_name":"Natasha Broude","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Natasha Broude","raw_affiliation_strings":["Department of Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering, Boston University, Boston, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015981980","display_name":"Wilson W. Wong","orcid":"https://orcid.org/0000-0001-8394-889X"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wilson W. Wong","raw_affiliation_strings":["BE605 Course, Biomedical Engineering, Boston University, Boston, USA","Department of Biomedical Engineering, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"BE605 Course, Biomedical Engineering, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]},{"raw_affiliation_string":"Department of Biomedical Engineering, Boston University, Boston, USA","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056863747","display_name":"James E. Galagan","orcid":"https://orcid.org/0000-0003-0542-3291"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"James E. Galagan","raw_affiliation_strings":["Bioinformatics program, Boston University, Boston, USA. jgalag@bu.edu","Department of Biomedical Engineering, Boston University, Boston, USA. jgalag@bu.edu","National Emerging Infectious Diseases Laboratory, Boston University, Boston, USA. jgalag@bu.edu","National Emerging Infectious Diseases Laboratory, Boston University, Boston, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics program, Boston University, Boston, USA. jgalag@bu.edu","institution_ids":["https://openalex.org/I111088046"]},{"raw_affiliation_string":"Department of Biomedical Engineering, Boston University, Boston, USA. jgalag@bu.edu","institution_ids":["https://openalex.org/I111088046"]},{"raw_affiliation_string":"National Emerging Infectious Diseases Laboratory, Boston University, Boston, USA. jgalag@bu.edu","institution_ids":["https://openalex.org/I111088046"]},{"raw_affiliation_string":"National Emerging Infectious Diseases Laboratory, Boston University, Boston, USA","institution_ids":["https://openalex.org/I111088046"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":69,"corresponding_author_ids":["https://openalex.org/A5056863747"],"corresponding_institution_ids":["https://openalex.org/I111088046"],"apc_list":null,"apc_paid":null,"fwci":12.2361,"has_fulltext":true,"cited_by_count":148,"citation_normalized_percentile":{"value":0.98843788,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"11","issue":"1","first_page":"1","last_page":"1"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.8004000186920166,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10120","display_name":"Bacterial Genetics and Biotechnology","score":0.8004000186920166,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10943","display_name":"Escherichia coli research studies","score":0.051899999380111694,"subfield":{"id":"https://openalex.org/subfields/1310","display_name":"Endocrinology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.029899999499320984,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mechanism","display_name":"Mechanism (biology)","score":0.6345422267913818},{"id":"https://openalex.org/keywords/escherichia-coli","display_name":"Escherichia coli","score":0.6122451424598694},{"id":"https://openalex.org/keywords/glutamate-receptor","display_name":"Glutamate receptor","score":0.573438823223114},{"id":"https://openalex.org/keywords/metabolism","display_name":"Metabolism","score":0.567750096321106},{"id":"https://openalex.org/keywords/decarboxylation","display_name":"Decarboxylation","score":0.548626720905304},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5194182395935059},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.5121414661407471},{"id":"https://openalex.org/keywords/enzyme","display_name":"Enzyme","score":0.4703775942325592},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.4626413881778717},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3713383078575134},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3352469205856323},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.3290998339653015}],"concepts":[{"id":"https://openalex.org/C89611455","wikidata":"https://www.wikidata.org/wiki/Q6804646","display_name":"Mechanism (biology)","level":2,"score":0.6345422267913818},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.6122451424598694},{"id":"https://openalex.org/C61174792","wikidata":"https://www.wikidata.org/wiki/Q420510","display_name":"Glutamate receptor","level":3,"score":0.573438823223114},{"id":"https://openalex.org/C62231903","wikidata":"https://www.wikidata.org/wiki/Q1057","display_name":"Metabolism","level":2,"score":0.567750096321106},{"id":"https://openalex.org/C2780595602","wikidata":"https://www.wikidata.org/wiki/Q898436","display_name":"Decarboxylation","level":3,"score":0.548626720905304},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5194182395935059},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.5121414661407471},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.4703775942325592},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.4626413881778717},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3713383078575134},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3352469205856323},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.3290998339653015},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C161790260","wikidata":"https://www.wikidata.org/wiki/Q82264","display_name":"Catalysis","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D006863","descriptor_name":"Hydrogen-Ion Concentration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006863","descriptor_name":"Hydrogen-Ion Concentration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006863","descriptor_name":"Hydrogen-Ion Concentration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029968","descriptor_name":"Escherichia coli Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1186/s12918-016-0376-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-016-0376-y","pdf_url":"https://bmcsystbiol.biomedcentral.com/track/pdf/10.1186/s12918-016-0376-y","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:28061857","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28061857","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5217608","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5217608","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Syst Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12918-016-0376-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-016-0376-y","pdf_url":"https://bmcsystbiol.biomedcentral.com/track/pdf/10.1186/s12918-016-0376-y","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1580660927","display_name":null,"funder_award_id":"1R01GM117238","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G3651666347","display_name":null,"funder_award_id":"1DP2OD007188","funder_id":"https://openalex.org/F4320337349","funder_display_name":"NIH Office of the Director"},{"id":"https://openalex.org/G8006810663","display_name":null,"funder_award_id":"1DP2OD007188","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8305397893","display_name":null,"funder_award_id":"(R01) AI114648","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320320909","display_name":"Keio University","ror":"https://ror.org/02kn6nx58"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337349","display_name":"NIH Office of the Director","ror":"https://ror.org/00fj8a872"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2567777922.pdf","grobid_xml":"https://content.openalex.org/works/W2567777922.grobid-xml"},"referenced_works_count":81,"referenced_works":["https://openalex.org/W1545921898","https://openalex.org/W1551233459","https://openalex.org/W1563686976","https://openalex.org/W1580258518","https://openalex.org/W1592537566","https://openalex.org/W1602136979","https://openalex.org/W1627927614","https://openalex.org/W1691891364","https://openalex.org/W1740334656","https://openalex.org/W1793659798","https://openalex.org/W1834673123","https://openalex.org/W1854916942","https://openalex.org/W1897119929","https://openalex.org/W1970056626","https://openalex.org/W1971602185","https://openalex.org/W1979136055","https://openalex.org/W1984016408","https://openalex.org/W1991640026","https://openalex.org/W1994106324","https://openalex.org/W1997910256","https://openalex.org/W1999305069","https://openalex.org/W2001979955","https://openalex.org/W2004254961","https://openalex.org/W2005508641","https://openalex.org/W2006061929","https://openalex.org/W2007897629","https://openalex.org/W2016167342","https://openalex.org/W2017840637","https://openalex.org/W2021541861","https://openalex.org/W2023551464","https://openalex.org/W2033920519","https://openalex.org/W2040694642","https://openalex.org/W2053712365","https://openalex.org/W2070934708","https://openalex.org/W2081929574","https://openalex.org/W2083632051","https://openalex.org/W2087916586","https://openalex.org/W2092620403","https://openalex.org/W2096053073","https://openalex.org/W2096356810","https://openalex.org/W2096873549","https://openalex.org/W2101637688","https://openalex.org/W2104640980","https://openalex.org/W2108234281","https://openalex.org/W2108759406","https://openalex.org/W2108795036","https://openalex.org/W2112859960","https://openalex.org/W2113843263","https://openalex.org/W2114411529","https://openalex.org/W2114915211","https://openalex.org/W2116099298","https://openalex.org/W2116137883","https://openalex.org/W2119407589","https://openalex.org/W2120075755","https://openalex.org/W2125880087","https://openalex.org/W2128554689","https://openalex.org/W2131478115","https://openalex.org/W2133130714","https://openalex.org/W2135724552","https://openalex.org/W2136164932","https://openalex.org/W2136806453","https://openalex.org/W2138371117","https://openalex.org/W2139489886","https://openalex.org/W2144330806","https://openalex.org/W2144458042","https://openalex.org/W2147819069","https://openalex.org/W2148641266","https://openalex.org/W2152434411","https://openalex.org/W2157009395","https://openalex.org/W2157186467","https://openalex.org/W2157285911","https://openalex.org/W2160403140","https://openalex.org/W2161435986","https://openalex.org/W2163410095","https://openalex.org/W2168215521","https://openalex.org/W2168370822","https://openalex.org/W2170551349","https://openalex.org/W2170806980","https://openalex.org/W2202740953","https://openalex.org/W2255321840","https://openalex.org/W4233997115"],"related_works":["https://openalex.org/W1984955493","https://openalex.org/W1987685202","https://openalex.org/W4390393178","https://openalex.org/W4239503938","https://openalex.org/W2952699752","https://openalex.org/W3043940973","https://openalex.org/W2082898637","https://openalex.org/W2367949257","https://openalex.org/W2080368264","https://openalex.org/W123440712"],"abstract_inverted_index":{"BACKGROUND:":[0],"Enteric":[1],"Escherichia":[2],"coli":[3],"survives":[4],"the":[5,10,54,84,157,183,194,214],"highly":[6],"acidic":[7],"environment":[8],"of":[9,53,75,87,160,196,210,217],"stomach":[11],"through":[12],"multiple":[13,55],"acid":[14,140],"resistance":[15],"(AR)":[16],"mechanisms.":[17],"The":[18,33,51],"most":[19],"effective":[20],"system,":[21,36],"AR2,":[22],"decarboxylates":[23],"externally-derived":[24],"glutamate":[25,142,199],"to":[26,81,127],"remove":[27],"cytoplasmic":[28],"protons":[29],"and":[30,58,77,93,105,120,125,144,190,198,206],"excrete":[31],"GABA.":[32],"first":[34],"described":[35],"AR1,":[37],"does":[38],"not":[39,48,66],"require":[40],"an":[41],"external":[42],"amino":[43],"acid.":[44],"Its":[45],"mechanism":[46,152],"has":[47,65],"been":[49,67],"determined.":[50],"regulation":[52,195],"AR":[56,187],"systems":[57],"their":[59],"coordination":[60],"with":[61,164,193,221],"broader":[62],"cellular":[63],"metabolism":[64],"fully":[68],"explored.":[69],"RESULTS:":[70],"We":[71],"utilized":[72],"a":[73,128,150],"combination":[74],"ChIP-Seq":[76],"gene":[78,112],"expression":[79,113],"analysis":[80],"experimentally":[82,207],"map":[83],"regulatory":[85,129,184],"interactions":[86,104],"four":[88,135],"TFs:":[89],"nac,":[90],"ntrC,":[91],"ompR,":[92],"csiR.":[94],"Our":[95,115,179],"data":[96,116,180],"identified":[97],"all":[98,134],"previously":[99,109],"in":[100,132,138,212],"vivo":[101],"confirmed":[102,176],"direct":[103],"revealed":[106],"several":[107,171],"others":[108],"inferred":[110],"from":[111],"data.":[114],"demonstrate":[117],"that":[118,174,182],"nac":[119],"csiR":[121],"directly":[122],"modulate":[123],"AR,":[124],"leads":[126],"network":[130,185],"model":[131,148,209],"which":[133,156,213],"TFs":[136],"participate":[137],"coordinating":[139],"resistance,":[141],"metabolism,":[143,200],"nitrogen":[145,201],"metabolism.":[146,202],"This":[147,168],"predicts":[149],"novel":[151],"for":[153],"AR1":[154,211],"by":[155],"decarboxylation":[158,215],"enzymes":[159,216],"AR2":[161,218],"are":[162,219],"used":[163,220],"internally":[165,222],"derived":[166,223],"glutamate.":[167,224],"hypothesis":[169],"makes":[170],"testable":[172],"predictions":[173],"we":[175],"experimentally.":[177],"CONCLUSIONS:":[178],"suggest":[181],"underlying":[186],"is":[188],"complex":[189],"deeply":[191],"interconnected":[192],"GABA":[197],"These":[203],"connections":[204],"underlie":[205],"validated":[208]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":11},{"year":2023,"cited_by_count":17},{"year":2022,"cited_by_count":25},{"year":2021,"cited_by_count":28},{"year":2020,"cited_by_count":25},{"year":2019,"cited_by_count":13},{"year":2018,"cited_by_count":14},{"year":2017,"cited_by_count":4}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
