{"id":"https://openalex.org/W2562719290","doi":"https://doi.org/10.1186/s12918-016-0351-7","title":"A novel index of protein-protein interface propensity improves interface residue recognition","display_name":"A novel index of protein-protein interface propensity improves interface residue recognition","publication_year":2016,"publication_date":"2016-12-01","ids":{"openalex":"https://openalex.org/W2562719290","doi":"https://doi.org/10.1186/s12918-016-0351-7","mag":"2562719290","pmid":"https://pubmed.ncbi.nlm.nih.gov/28155660"},"language":"en","primary_location":{"id":"doi:10.1186/s12918-016-0351-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-016-0351-7","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/s12918-016-0351-7","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/s12918-016-0351-7","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041205100","display_name":"Wentao Dai","orcid":"https://orcid.org/0000-0002-0762-919X"},"institutions":[{"id":"https://openalex.org/I4210146919","display_name":"Shanghai Industrial Technology Institute","ror":"https://ror.org/03j1pdd39","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210146919"]},{"id":"https://openalex.org/I4210162648","display_name":"Shanghai Center For Bioinformation Technology","ror":"https://ror.org/04nyf1f54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210162648"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wentao Dai","raw_affiliation_strings":["Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China","Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","institution_ids":["https://openalex.org/I4210146919"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047692460","display_name":"Aiping Wu","orcid":"https://orcid.org/0000-0002-5869-651X"},"institutions":[{"id":"https://openalex.org/I4210122727","display_name":"Suzhou Institute of Systems Medicine","ror":"https://ror.org/02szepc22","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210122727","https://openalex.org/I4210141683"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Aiping Wu","raw_affiliation_strings":["Suzhou Institute of Systems Medicine, Suzhou, Jiangsu, 215123, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Suzhou Institute of Systems Medicine, Suzhou, Jiangsu, 215123, China","institution_ids":["https://openalex.org/I4210122727"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014322418","display_name":"Liangxiao Ma","orcid":"https://orcid.org/0000-0002-9103-4913"},"institutions":[{"id":"https://openalex.org/I4210162648","display_name":"Shanghai Center For Bioinformation Technology","ror":"https://ror.org/04nyf1f54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210162648"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Liangxiao Ma","raw_affiliation_strings":["Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China","institution_ids":["https://openalex.org/I4210162648"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008280608","display_name":"Yixue Li","orcid":"https://orcid.org/0000-0002-1198-7176"},"institutions":[{"id":"https://openalex.org/I4210146919","display_name":"Shanghai Industrial Technology Institute","ror":"https://ror.org/03j1pdd39","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210146919"]},{"id":"https://openalex.org/I4210162648","display_name":"Shanghai Center For Bioinformation Technology","ror":"https://ror.org/04nyf1f54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210162648"]},{"id":"https://openalex.org/I4210164195","display_name":"Shanghai Institute of Pharmaceutical Industry","ror":"https://ror.org/05mqm5297","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210164195"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yi-Xue Li","raw_affiliation_strings":["Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China","Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China. yyli@scbit.org","Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org","Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China. yyli@scbit.org","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","institution_ids":["https://openalex.org/I4210164195"]},{"raw_affiliation_string":"Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org","institution_ids":["https://openalex.org/I4210164195"]},{"raw_affiliation_string":"Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","institution_ids":["https://openalex.org/I4210146919"]},{"raw_affiliation_string":"Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org","institution_ids":["https://openalex.org/I4210146919"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062116814","display_name":"Taijiao Jiang","orcid":"https://orcid.org/0000-0002-6280-6347"},"institutions":[{"id":"https://openalex.org/I4210122727","display_name":"Suzhou Institute of Systems Medicine","ror":"https://ror.org/02szepc22","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210122727","https://openalex.org/I4210141683"]},{"id":"https://openalex.org/I4210146919","display_name":"Shanghai Industrial Technology Institute","ror":"https://ror.org/03j1pdd39","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210146919"]},{"id":"https://openalex.org/I4210162648","display_name":"Shanghai Center For Bioinformation Technology","ror":"https://ror.org/04nyf1f54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210162648"]},{"id":"https://openalex.org/I4210164195","display_name":"Shanghai Institute of Pharmaceutical Industry","ror":"https://ror.org/05mqm5297","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210164195"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yi-Xue Li","raw_affiliation_strings":["Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China","Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China. yyli@scbit.org","Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org","Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org","Suzhou Institute of Systems Medicine, Suzhou, Jiangsu, 215123, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China. yyli@scbit.org","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","institution_ids":["https://openalex.org/I4210164195"]},{"raw_affiliation_string":"Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org","institution_ids":["https://openalex.org/I4210164195"]},{"raw_affiliation_string":"Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","institution_ids":["https://openalex.org/I4210146919"]},{"raw_affiliation_string":"Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org","institution_ids":["https://openalex.org/I4210146919"]},{"raw_affiliation_string":"Suzhou Institute of Systems Medicine, Suzhou, Jiangsu, 215123, China","institution_ids":["https://openalex.org/I4210122727"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100384402","display_name":"Yuanyuan Li","orcid":"https://orcid.org/0000-0001-8755-4695"},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]},{"id":"https://openalex.org/I4210122727","display_name":"Suzhou Institute of Systems Medicine","ror":"https://ror.org/02szepc22","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210122727","https://openalex.org/I4210141683"]},{"id":"https://openalex.org/I4210146919","display_name":"Shanghai Industrial Technology Institute","ror":"https://ror.org/03j1pdd39","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210146919"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Taijiao Jiang","raw_affiliation_strings":["Center for Systems Medicine, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, 100005, China. taijiao@ibms.pumc.edu.cn","Suzhou Institute of Systems Medicine, Suzhou, Jiangsu, 215123, China. taijiao@ibms.pumc.edu.cn","Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Systems Medicine, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, 100005, China. taijiao@ibms.pumc.edu.cn","institution_ids":["https://openalex.org/I200296433"]},{"raw_affiliation_string":"Suzhou Institute of Systems Medicine, Suzhou, Jiangsu, 215123, China. taijiao@ibms.pumc.edu.cn","institution_ids":["https://openalex.org/I4210122727"]},{"raw_affiliation_string":"Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","institution_ids":["https://openalex.org/I4210146919"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100384402","display_name":"Yuanyuan Li","orcid":"https://orcid.org/0000-0001-8755-4695"},"institutions":[{"id":"https://openalex.org/I4210146919","display_name":"Shanghai Industrial Technology Institute","ror":"https://ror.org/03j1pdd39","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210146919"]},{"id":"https://openalex.org/I4210162648","display_name":"Shanghai Center For Bioinformation Technology","ror":"https://ror.org/04nyf1f54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210162648"]},{"id":"https://openalex.org/I4210164195","display_name":"Shanghai Institute of Pharmaceutical Industry","ror":"https://ror.org/05mqm5297","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210164195"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yuan-Yuan Li","raw_affiliation_strings":["Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China","Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China. yyli@scbit.org","Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org","Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China. yyli@scbit.org","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","institution_ids":["https://openalex.org/I4210164195"]},{"raw_affiliation_string":"Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org","institution_ids":["https://openalex.org/I4210164195"]},{"raw_affiliation_string":"Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","institution_ids":["https://openalex.org/I4210146919"]},{"raw_affiliation_string":"Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org","institution_ids":["https://openalex.org/I4210146919"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100384402","display_name":"Yuanyuan Li","orcid":"https://orcid.org/0000-0001-8755-4695"},"institutions":[{"id":"https://openalex.org/I4210146919","display_name":"Shanghai Industrial Technology Institute","ror":"https://ror.org/03j1pdd39","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210146919"]},{"id":"https://openalex.org/I4210162648","display_name":"Shanghai Center For Bioinformation Technology","ror":"https://ror.org/04nyf1f54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210162648"]},{"id":"https://openalex.org/I4210164195","display_name":"Shanghai Institute of Pharmaceutical Industry","ror":"https://ror.org/05mqm5297","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210164195"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuan-Yuan Li","raw_affiliation_strings":["Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China","Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China. yyli@scbit.org","Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org","Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Shanghai Center for Bioinformation Technology, 1278 Keyuan Road, Shanghai, 2012035, People's Republic of China. yyli@scbit.org","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","institution_ids":["https://openalex.org/I4210164195"]},{"raw_affiliation_string":"Shanghai Engineering Research Center of Pharmaceutical Translation, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org","institution_ids":["https://openalex.org/I4210164195"]},{"raw_affiliation_string":"Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China","institution_ids":["https://openalex.org/I4210146919"]},{"raw_affiliation_string":"Shanghai Industrial Technology Institute, 1278 Keyuan Road, Shanghai, 201203, People's Republic of China. yyli@scbit.org","institution_ids":["https://openalex.org/I4210146919"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5062116814","https://openalex.org/A5100384402"],"corresponding_institution_ids":["https://openalex.org/I200296433","https://openalex.org/I4210122727","https://openalex.org/I4210146919","https://openalex.org/I4210162648","https://openalex.org/I4210164195"],"apc_list":null,"apc_paid":null,"fwci":0.9618,"has_fulltext":true,"cited_by_count":22,"citation_normalized_percentile":{"value":0.77592376,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"10","issue":"S4","first_page":"112","last_page":"112"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.5138000249862671,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.5138000249862671,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.19089999794960022,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.02539999969303608,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.659743070602417},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5009372234344482},{"id":"https://openalex.org/keywords/residue","display_name":"Residue (chemistry)","score":0.4133198857307434},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3912126421928406},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.33828502893447876},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.26291388273239136},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.1447913646697998},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.10974553227424622}],"concepts":[{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.659743070602417},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5009372234344482},{"id":"https://openalex.org/C2781338088","wikidata":"https://www.wikidata.org/wiki/Q903495","display_name":"Residue (chemistry)","level":2,"score":0.4133198857307434},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3912126421928406},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.33828502893447876},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.26291388273239136},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.1447913646697998},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.10974553227424622},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012997","descriptor_name":"Solvents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012997","descriptor_name":"Solvents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012997","descriptor_name":"Solvents","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1186/s12918-016-0351-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-016-0351-7","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/s12918-016-0351-7","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:28155660","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28155660","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5259823","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5259823","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Syst Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12918-016-0351-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-016-0351-7","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/s12918-016-0351-7","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2929117699","display_name":null,"funder_award_id":"91529302","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5530627368","display_name":null,"funder_award_id":"15ZR1430300","funder_id":"https://openalex.org/F4320309612","funder_display_name":"Natural Science Foundation of Shanghai"},{"id":"https://openalex.org/G6949802811","display_name":null,"funder_award_id":"81672736","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320309612","display_name":"Natural Science Foundation of Shanghai","ror":null},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2562719290.pdf","grobid_xml":"https://content.openalex.org/works/W2562719290.grobid-xml"},"referenced_works_count":50,"referenced_works":["https://openalex.org/W631602627","https://openalex.org/W1582257194","https://openalex.org/W1829437510","https://openalex.org/W1926568554","https://openalex.org/W1985153601","https://openalex.org/W1987546980","https://openalex.org/W2009405916","https://openalex.org/W2014744153","https://openalex.org/W2016600204","https://openalex.org/W2018820180","https://openalex.org/W2021041804","https://openalex.org/W2025120281","https://openalex.org/W2030154259","https://openalex.org/W2031772330","https://openalex.org/W2039388179","https://openalex.org/W2043338013","https://openalex.org/W2043699100","https://openalex.org/W2047990563","https://openalex.org/W2051710717","https://openalex.org/W2058017150","https://openalex.org/W2058527555","https://openalex.org/W2061873937","https://openalex.org/W2075770210","https://openalex.org/W2084949662","https://openalex.org/W2087574732","https://openalex.org/W2091565674","https://openalex.org/W2095224938","https://openalex.org/W2103856741","https://openalex.org/W2104760790","https://openalex.org/W2108243628","https://openalex.org/W2110115297","https://openalex.org/W2114394047","https://openalex.org/W2114597228","https://openalex.org/W2115156437","https://openalex.org/W2123620046","https://openalex.org/W2129558039","https://openalex.org/W2134056721","https://openalex.org/W2136525667","https://openalex.org/W2136832587","https://openalex.org/W2142796125","https://openalex.org/W2143210482","https://openalex.org/W2143881057","https://openalex.org/W2147274570","https://openalex.org/W2151311229","https://openalex.org/W2158714788","https://openalex.org/W2161072217","https://openalex.org/W2166186928","https://openalex.org/W2170872475","https://openalex.org/W2419563636","https://openalex.org/W4240861547"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2478288626","https://openalex.org/W2350741829","https://openalex.org/W2530322880","https://openalex.org/W1596801655"],"abstract_inverted_index":{"BACKGROUND:":[0],"Protein-protein":[1],"interface":[2,31,68,78,89,114,119,146,164,176],"holds":[3],"important":[4],"information":[5],"of":[6,24,87,108,155],"protein-protein":[7,36,77,88,92,97,113,156,163,184],"interactions":[8],"which":[9,168],"play":[10],"key":[11],"roles":[12],"in":[13,49,102,110,181],"most":[14,43],"biological":[15],"processes.":[16],"In":[17,62],"the":[18,63,106,112,131,145,175,183],"past":[19],"few":[20],"years,":[21],"a":[22,50,73,84,151,160],"lot":[23],"efforts":[25],"have":[26],"been":[27],"made":[28],"to":[29,66,104,143,173,192],"improve":[30,67,144,174],"residue":[32,69,76,120,147,177],"recognition":[33,121,178],"by":[34],"characterizing":[35],"interfaces":[37,93,98],"and":[38,53,82,179,188],"extracting":[39],"relevant":[40],"features.":[41],"However,":[42],"previous":[44],"studies":[45],"were":[46],"carried":[47],"out":[48],"qualitative":[51],"level,":[52],"there":[54],"are":[55,190],"also":[56],"some":[57],"inconsistencies":[58],"between":[59],"them.":[60],"RESULTS:":[61],"present":[64],"work,":[65],"recognition,":[70],"we":[71,116,158],"built":[72],"novel":[74,139,161],"quantitative":[75,153,162],"propensity":[79,165],"index":[80,166],"(QIPI)":[81],"gained":[83],"comprehensive":[85,96,152],"picture":[86],"through":[90],"analyzing":[91],"on":[94,130],"our":[95,138,196],"dataset":[99],"(Astral2.05-40-4506).":[100],"Furthermore,":[101],"order":[103],"assess":[105],"effect":[107],"QIPI":[109,140,187],"improving":[111],"prediction,":[115],"developed":[117],"an":[118],"method":[122],"SPR":[123,189],"(Single":[124],"domain":[125],"based":[126,129],"Patch":[127],"Recognition)":[128],"QIPI.":[132],"The":[133],"evaluation":[134],"results":[135],"proved":[136],"that":[137],"is":[141],"able":[142],"recognition.":[148],"CONCLUSIONS:":[149],"Through":[150],"analysis":[154],"interface,":[157],"constructed":[159],"(QIPI),":[167],"could":[169],"be":[170],"easily":[171],"applied":[172],"helpful":[180],"understanding":[182],"interface.":[185],"AVAILABILITY:":[186],"available":[191],"non-commercial":[193],"users":[194],"at":[195],"website:":[197],"http://www.scbit.org/QIPI/":[198],".":[199]},"counts_by_year":[{"year":2024,"cited_by_count":3},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":6}],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}
