{"id":"https://openalex.org/W2240110861","doi":"https://doi.org/10.1186/s12918-015-0244-1","title":"A new scheme to discover functional associations and regulatory networks of E3 ubiquitin ligases","display_name":"A new scheme to discover functional associations and regulatory networks of E3 ubiquitin ligases","publication_year":2016,"publication_date":"2016-01-11","ids":{"openalex":"https://openalex.org/W2240110861","doi":"https://doi.org/10.1186/s12918-015-0244-1","mag":"2240110861","pmid":"https://pubmed.ncbi.nlm.nih.gov/26818115"},"language":"en","primary_location":{"id":"doi:10.1186/s12918-015-0244-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-015-0244-1","pdf_url":null,"source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://doi.org/10.1186/s12918-015-0244-1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101875147","display_name":"Kai\u2010Yao Huang","orcid":"https://orcid.org/0000-0001-9855-1035"},"institutions":[{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Kai-Yao Huang","raw_affiliation_strings":["Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, 320, Taiwan. kaiyao.tw@gmail.com","Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, 320, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, 320, Taiwan. kaiyao.tw@gmail.com","institution_ids":[]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102950025","display_name":"Julia Weng","orcid":"https://orcid.org/0000-0003-0127-0945"},"institutions":[{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Julia Tzu-Ya Weng","raw_affiliation_strings":["Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, 320, Taiwan. julweng@saturn.yzu.edu.tw","Innovation Center for Big Data and Digital Convergence, Yuan Ze University, Taoyuan, 320, Taiwan. julweng@saturn.yzu.edu.tw","Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, 320, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, 320, Taiwan. julweng@saturn.yzu.edu.tw","institution_ids":[]},{"raw_affiliation_string":"Innovation Center for Big Data and Digital Convergence, Yuan Ze University, Taoyuan, 320, Taiwan. julweng@saturn.yzu.edu.tw","institution_ids":[]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045675277","display_name":"Tzong-Yi Lee","orcid":"https://orcid.org/0000-0001-8475-7868"},"institutions":[{"id":"https://openalex.org/I99908691","display_name":"Yuan Ze University","ror":"https://ror.org/01fv1ds98","country_code":"TW","type":"education","lineage":["https://openalex.org/I99908691"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Tzong-Yi Lee","raw_affiliation_strings":["Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, 320, Taiwan. francis@saturn.yzu.edu.tw","Innovation Center for Big Data and Digital Convergence, Yuan Ze University, Taoyuan, 320, Taiwan. francis@saturn.yzu.edu.tw","Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, 320, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, 320, Taiwan. francis@saturn.yzu.edu.tw","institution_ids":[]},{"raw_affiliation_string":"Innovation Center for Big Data and Digital Convergence, Yuan Ze University, Taoyuan, 320, Taiwan. francis@saturn.yzu.edu.tw","institution_ids":[]},{"raw_affiliation_string":"Department of Computer Science and Engineering, Yuan Ze University, Taoyuan, 320, Taiwan","institution_ids":["https://openalex.org/I99908691"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5034954530","display_name":"Shun\u2010Long Weng","orcid":null},"institutions":[{"id":"https://openalex.org/I2802753785","display_name":"Mackay Memorial Hospital","ror":"https://ror.org/015b6az38","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I2802753785"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Shun-Long Weng","raw_affiliation_strings":["Department of Medicine, Mackay Medical College, New Taipei City, 252, Taiwan. 4467@mmh.org.tw","Department of Obstetrics and Gynecology, Hsinchu Mackay Memorial Hospital, Hsin-Chu, 300, Taiwan. 4467@mmh.org.tw","Mackay Junior College of Medicine, Nursing and Management, Taipei, 112, Taiwan. 4467@mmh.org.tw","Department of Obstetrics and Gynecology, Hsinchu Mackay Memorial Hospital, Hsin-Chu, 300, Taiwan"],"affiliations":[{"raw_affiliation_string":"Department of Medicine, Mackay Medical College, New Taipei City, 252, Taiwan. 4467@mmh.org.tw","institution_ids":[]},{"raw_affiliation_string":"Department of Obstetrics and Gynecology, Hsinchu Mackay Memorial Hospital, Hsin-Chu, 300, Taiwan. 4467@mmh.org.tw","institution_ids":[]},{"raw_affiliation_string":"Mackay Junior College of Medicine, Nursing and Management, Taipei, 112, Taiwan. 4467@mmh.org.tw","institution_ids":[]},{"raw_affiliation_string":"Department of Obstetrics and Gynecology, Hsinchu Mackay Memorial Hospital, Hsin-Chu, 300, Taiwan","institution_ids":["https://openalex.org/I2802753785"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5034954530"],"corresponding_institution_ids":["https://openalex.org/I2802753785"],"apc_list":null,"apc_paid":null,"fwci":0.523,"has_fulltext":false,"cited_by_count":8,"citation_normalized_percentile":{"value":0.7063162,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"10","issue":"S1","first_page":"3","last_page":"3"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11041","display_name":"Ubiquitin and proteasome pathways","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11041","display_name":"Ubiquitin and proteasome pathways","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10583","display_name":"Cancer-related Molecular Pathways","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12534","display_name":"Protein Degradation and Inhibitors","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ubiquitin","display_name":"Ubiquitin","score":0.9066139459609985},{"id":"https://openalex.org/keywords/ubiquitin-protein-ligases","display_name":"Ubiquitin-Protein Ligases","score":0.593156635761261},{"id":"https://openalex.org/keywords/mdm2","display_name":"Mdm2","score":0.5336796641349792},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.49376043677330017},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4824526906013489},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.4408060908317566},{"id":"https://openalex.org/keywords/ubiquitin-ligase","display_name":"Ubiquitin ligase","score":0.42906442284584045},{"id":"https://openalex.org/keywords/f-box-protein","display_name":"F-box protein","score":0.4191746711730957},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3311474323272705},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.22309017181396484},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09522479772567749}],"concepts":[{"id":"https://openalex.org/C25602115","wikidata":"https://www.wikidata.org/wiki/Q407111","display_name":"Ubiquitin","level":3,"score":0.9066139459609985},{"id":"https://openalex.org/C2908868211","wikidata":"https://www.wikidata.org/wiki/Q4274835","display_name":"Ubiquitin-Protein Ligases","level":5,"score":0.593156635761261},{"id":"https://openalex.org/C2776192174","wikidata":"https://www.wikidata.org/wiki/Q18028978","display_name":"Mdm2","level":3,"score":0.5336796641349792},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.49376043677330017},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4824526906013489},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.4408060908317566},{"id":"https://openalex.org/C134459356","wikidata":"https://www.wikidata.org/wiki/Q4274835","display_name":"Ubiquitin ligase","level":4,"score":0.42906442284584045},{"id":"https://openalex.org/C131312102","wikidata":"https://www.wikidata.org/wiki/Q5423632","display_name":"F-box protein","level":5,"score":0.4191746711730957},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3311474323272705},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.22309017181396484},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09522479772567749}],"mesh":[{"descriptor_ui":"D000072417","descriptor_name":"Protein Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072417","descriptor_name":"Protein Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000072417","descriptor_name":"Protein Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013379","descriptor_name":"Substrate Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013379","descriptor_name":"Substrate Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013379","descriptor_name":"Substrate Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044767","descriptor_name":"Ubiquitin-Protein Ligases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D044767","descriptor_name":"Ubiquitin-Protein Ligases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D044767","descriptor_name":"Ubiquitin-Protein Ligases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D044767","descriptor_name":"Ubiquitin-Protein Ligases","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D044767","descriptor_name":"Ubiquitin-Protein Ligases","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D044767","descriptor_name":"Ubiquitin-Protein Ligases","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D054875","descriptor_name":"Ubiquitination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054875","descriptor_name":"Ubiquitination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054875","descriptor_name":"Ubiquitination","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066289","descriptor_name":"Data Curation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1186/s12918-015-0244-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-015-0244-1","pdf_url":null,"source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:26818115","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26818115","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4895279","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4895279","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Syst Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12918-015-0244-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-015-0244-1","pdf_url":null,"source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":80,"referenced_works":["https://openalex.org/W1270834676","https://openalex.org/W1517270567","https://openalex.org/W1565276997","https://openalex.org/W1566952502","https://openalex.org/W1568400197","https://openalex.org/W1963967499","https://openalex.org/W1965995197","https://openalex.org/W1970039616","https://openalex.org/W1971575429","https://openalex.org/W1979050011","https://openalex.org/W1984537356","https://openalex.org/W1998767819","https://openalex.org/W1999212541","https://openalex.org/W2004250476","https://openalex.org/W2005750837","https://openalex.org/W2007249806","https://openalex.org/W2015291446","https://openalex.org/W2015933637","https://openalex.org/W2023967363","https://openalex.org/W2029406337","https://openalex.org/W2034890309","https://openalex.org/W2036662864","https://openalex.org/W2037487430","https://openalex.org/W2041877620","https://openalex.org/W2049987290","https://openalex.org/W2050043175","https://openalex.org/W2050994851","https://openalex.org/W2052779687","https://openalex.org/W2056530510","https://openalex.org/W2056775476","https://openalex.org/W2058015944","https://openalex.org/W2061145246","https://openalex.org/W2062510288","https://openalex.org/W2063866450","https://openalex.org/W2064850779","https://openalex.org/W2067343115","https://openalex.org/W2073936529","https://openalex.org/W2075319133","https://openalex.org/W2076425088","https://openalex.org/W2080221075","https://openalex.org/W2080553628","https://openalex.org/W2081120309","https://openalex.org/W2082979850","https://openalex.org/W2083665788","https://openalex.org/W2087752833","https://openalex.org/W2091352656","https://openalex.org/W2103237568","https://openalex.org/W2103305337","https://openalex.org/W2104804534","https://openalex.org/W2106391842","https://openalex.org/W2107644675","https://openalex.org/W2109021234","https://openalex.org/W2110181121","https://openalex.org/W2115666559","https://openalex.org/W2123939104","https://openalex.org/W2129137060","https://openalex.org/W2129448726","https://openalex.org/W2130277691","https://openalex.org/W2134095164","https://openalex.org/W2134129243","https://openalex.org/W2134873394","https://openalex.org/W2135278768","https://openalex.org/W2140453812","https://openalex.org/W2141818629","https://openalex.org/W2142374347","https://openalex.org/W2147542927","https://openalex.org/W2148853951","https://openalex.org/W2149376055","https://openalex.org/W2149511194","https://openalex.org/W2150123812","https://openalex.org/W2155853203","https://openalex.org/W2156899368","https://openalex.org/W2158266834","https://openalex.org/W2159482845","https://openalex.org/W2166987747","https://openalex.org/W2170095317","https://openalex.org/W2413266905","https://openalex.org/W4237686819","https://openalex.org/W4240834986","https://openalex.org/W4247074653"],"related_works":["https://openalex.org/W2007249806","https://openalex.org/W2102368462","https://openalex.org/W2094494461","https://openalex.org/W4323034334","https://openalex.org/W1510940290","https://openalex.org/W3212514911","https://openalex.org/W1964845760","https://openalex.org/W2348681936","https://openalex.org/W2169532909","https://openalex.org/W2158795036"],"abstract_inverted_index":{"Aside":[0],"from":[1],"the":[2,21,39,47],"ability":[3],"to":[4],"facilitate":[5],"comprehensive":[6],"investigations":[7],"of":[8,42,52],"protein":[9],"ubiquitination":[10,43],"networks,":[11],"by":[12],"integrating":[13],"information":[14],"regarding":[15],"protein-protein":[16],"interactions":[17],"and":[18,45],"substrate":[19],"specificities,":[20],"proposed":[22],"method":[23],"could":[24],"discover":[25],"potential":[26],"E3":[27,56],"ligases":[28],"for":[29,38],"ubiquitinated":[30],"proteins.":[31],"Our":[32],"strategy":[33],"presents":[34],"an":[35],"efficient":[36],"means":[37],"preliminary":[40],"screen":[41],"networks":[44],"overcomes":[46],"challenge":[48],"as":[49],"a":[50],"result":[51],"limited":[53],"knowledge":[54],"about":[55],"ligase-regulated":[57],"ubiquitination.":[58]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
