{"id":"https://openalex.org/W2169161051","doi":"https://doi.org/10.1186/s12918-014-0091-5","title":"BioModels linked dataset","display_name":"BioModels linked dataset","publication_year":2014,"publication_date":"2014-08-14","ids":{"openalex":"https://openalex.org/W2169161051","doi":"https://doi.org/10.1186/s12918-014-0091-5","mag":"2169161051","pmid":"https://pubmed.ncbi.nlm.nih.gov/25182954"},"language":"en","primary_location":{"id":"doi:10.1186/s12918-014-0091-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-014-0091-5","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/s12918-014-0091-5","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"diamond","oa_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/s12918-014-0091-5","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034436640","display_name":"Sarala Wimalaratne","orcid":"https://orcid.org/0000-0002-5355-2576"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Sarala M Wimalaratne","raw_affiliation_strings":["European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. sarala@ebi.ac.uk","European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Hinxton, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. sarala@ebi.ac.uk","institution_ids":[]},{"raw_affiliation_string":"European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047905972","display_name":"Pierre Grenon","orcid":"https://orcid.org/0000-0003-4614-562X"},"institutions":[{"id":"https://openalex.org/I4210143902","display_name":"Farr Institute","ror":"https://ror.org/0585r9546","country_code":"GB","type":"education","lineage":["https://openalex.org/I4210143902"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Pierre Grenon","raw_affiliation_strings":["CHIME, The Farr Institute of Health Informatics Research, London, NW1 2DA, UK. pierregrenon@gmail.com","CHIME, The Farr Institute of Health Informatics Research, London, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CHIME, The Farr Institute of Health Informatics Research, London, NW1 2DA, UK. pierregrenon@gmail.com","institution_ids":[]},{"raw_affiliation_string":"CHIME, The Farr Institute of Health Informatics Research, London, UK","institution_ids":["https://openalex.org/I4210143902"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066783652","display_name":"Henning Hermjakob","orcid":"https://orcid.org/0000-0001-8479-0262"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Henning Hermjakob","raw_affiliation_strings":["European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. hhe@ebi.ac.uk","European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Hinxton, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. hhe@ebi.ac.uk","institution_ids":[]},{"raw_affiliation_string":"European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112438594","display_name":"Nicolas Le Nov\u00e8re","orcid":null},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I1302113299","display_name":"Babraham Institute","ror":"https://ror.org/01d5qpn59","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1302113299","https://openalex.org/I2799693246","https://openalex.org/I4210087105"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Nicolas Le Nov\u00e8re","raw_affiliation_strings":["Babraham Institute, Babraham Research Campus, Cambridge, CB22 3AT, UK. n.lenovere@gmail.com","European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. n.lenovere@gmail.com","European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","Babraham Institute, Babraham Research Campus, Cambridge, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Babraham Institute, Babraham Research Campus, Cambridge, CB22 3AT, UK. n.lenovere@gmail.com","institution_ids":[]},{"raw_affiliation_string":"European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. n.lenovere@gmail.com","institution_ids":[]},{"raw_affiliation_string":"European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]},{"raw_affiliation_string":"Babraham Institute, Babraham Research Campus, Cambridge, UK","institution_ids":["https://openalex.org/I1302113299"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5062892160","display_name":"Camille Laibe","orcid":"https://orcid.org/0000-0002-4625-743X"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Camille Laibe","raw_affiliation_strings":["European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. laibe@ebi.ac.uk","European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Hinxton, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SD, UK. laibe@ebi.ac.uk","institution_ids":[]},{"raw_affiliation_string":"European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Hinxton, UK","institution_ids":["https://openalex.org/I1303153112"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5034436640"],"corresponding_institution_ids":["https://openalex.org/I1303153112"],"apc_list":null,"apc_paid":null,"fwci":1.4228,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.81612094,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"8","issue":"1","first_page":"91","last_page":"91"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.2378000020980835,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.2378000020980835,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.1842000037431717,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.07490000128746033,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8209861516952515},{"id":"https://openalex.org/keywords/sbml","display_name":"SBML","score":0.65284663438797},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.5693088173866272},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.5643214583396912},{"id":"https://openalex.org/keywords/rdf","display_name":"RDF","score":0.5507805347442627},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.47621971368789673},{"id":"https://openalex.org/keywords/linked-data","display_name":"Linked data","score":0.44030922651290894},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.39970341324806213},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3793058693408966},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3369184136390686},{"id":"https://openalex.org/keywords/markup-language","display_name":"Markup language","score":0.15240022540092468},{"id":"https://openalex.org/keywords/xml","display_name":"XML","score":0.11854791641235352}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8209861516952515},{"id":"https://openalex.org/C87186988","wikidata":"https://www.wikidata.org/wiki/Q452197","display_name":"SBML","level":4,"score":0.65284663438797},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.5693088173866272},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.5643214583396912},{"id":"https://openalex.org/C147497476","wikidata":"https://www.wikidata.org/wiki/Q54872","display_name":"RDF","level":3,"score":0.5507805347442627},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.47621971368789673},{"id":"https://openalex.org/C69075417","wikidata":"https://www.wikidata.org/wiki/Q515701","display_name":"Linked data","level":3,"score":0.44030922651290894},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.39970341324806213},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3793058693408966},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3369184136390686},{"id":"https://openalex.org/C45874996","wikidata":"https://www.wikidata.org/wiki/Q37045","display_name":"Markup language","level":3,"score":0.15240022540092468},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.11854791641235352}],"mesh":[{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D003625","descriptor_name":"Data Collection","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019992","descriptor_name":"Databases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019992","descriptor_name":"Databases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019992","descriptor_name":"Databases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019992","descriptor_name":"Databases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12918-014-0091-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-014-0091-5","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/s12918-014-0091-5","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},{"id":"pmid:25182954","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25182954","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC systems biology","raw_type":null},{"id":"pmh:oai:eprints.ucl.ac.uk.OAI2:10036704","is_oa":false,"landing_page_url":"http://discovery.ucl.ac.uk/10036704/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400024","display_name":"UCL Discovery (University College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45129253","host_organization_name":"University College London","host_organization_lineage":["https://openalex.org/I45129253"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"   BMC SYSTEMS BIOLOGY , 8  (ARTN 91)     (2014)      ","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4423647","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4423647","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Syst Biol","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12918-014-0091-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12918-014-0091-5","pdf_url":"https://bmcsystbiol.biomedcentral.com/counter/pdf/10.1186/s12918-014-0091-5","source":{"id":"https://openalex.org/S92363890","display_name":"BMC Systems Biology","issn_l":"1752-0509","issn":["1752-0509"],"is_oa":true,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319900","host_organization_name":"Springer Science+Business Media","host_organization_lineage":["https://openalex.org/P4310319900","https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Science+Business Media","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Systems Biology","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1417547883","display_name":null,"funder_award_id":"BB/K016946/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G2144373698","display_name":null,"funder_award_id":"BB/J019305/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G6386387721","display_name":null,"funder_award_id":"BB/E006248/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G7181429030","display_name":"BioModels Database, the comprehensive resource for computational models in biology","funder_award_id":"BB/J019305/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G730969003","display_name":null,"funder_award_id":"BB/F010516/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2169161051.pdf","grobid_xml":"https://content.openalex.org/works/W2169161051.grobid-xml"},"referenced_works_count":30,"referenced_works":["https://openalex.org/W1964550430","https://openalex.org/W1989263028","https://openalex.org/W1989277387","https://openalex.org/W1998767819","https://openalex.org/W2015191210","https://openalex.org/W2042880070","https://openalex.org/W2058320302","https://openalex.org/W2074906123","https://openalex.org/W2096541451","https://openalex.org/W2096766502","https://openalex.org/W2100481137","https://openalex.org/W2100525485","https://openalex.org/W2103017472","https://openalex.org/W2113308846","https://openalex.org/W2113310608","https://openalex.org/W2114124738","https://openalex.org/W2116398954","https://openalex.org/W2117902162","https://openalex.org/W2120661538","https://openalex.org/W2124419982","https://openalex.org/W2128591653","https://openalex.org/W2128763542","https://openalex.org/W2136317480","https://openalex.org/W2137575744","https://openalex.org/W2137854030","https://openalex.org/W2144573571","https://openalex.org/W3020902208","https://openalex.org/W4233334497","https://openalex.org/W4237335579","https://openalex.org/W4242404314"],"related_works":["https://openalex.org/W2283287182","https://openalex.org/W1485690712","https://openalex.org/W82112649","https://openalex.org/W3128827045","https://openalex.org/W2945730294","https://openalex.org/W199330785","https://openalex.org/W2776293731","https://openalex.org/W2965230088","https://openalex.org/W4293389049","https://openalex.org/W1534806717"],"abstract_inverted_index":{"BACKGROUND:":[0],"BioModels":[1,84,97,128],"Database":[2],"is":[3,25,67],"a":[4,20,28,36,93,109,134,166],"reference":[5],"repository":[6],"of":[7,102,105,112,148,159],"mathematical":[8],"models":[9,115,122,172],"used":[10],"in":[11,27],"biology.":[12],"Models":[13,31],"are":[14],"stored":[15],"as":[16,61,92],"SBML":[17],"files":[18],"on":[19],"file":[21],"system":[22],"and":[23,39,75,118,121,156,176],"metadata":[24],"provided":[26],"relational":[29],"database.":[30],"can":[32],"be":[33],"retrieved":[34],"through":[35],"web":[37,42,140],"interface":[38],"programmatically":[40],"via":[41],"services.":[43],"In":[44],"addition":[45],"to":[46,51,73,116,154,169],"those":[47],"more":[48],"traditional":[49],"ways":[50],"access":[52],"information,":[53],"Linked":[54,85,98,129],"Data":[55],"using":[56],"Semantic":[57],"Web":[58],"technologies":[59],"(such":[60],"the":[62,83,89,103],"Resource":[63],"Description":[64],"Framework,":[65],"RDF),":[66],"becoming":[68],"an":[69],"increasingly":[70],"popular":[71],"means":[72],"describe":[74],"expose":[76],"biological":[77],"relevant":[78],"data.":[79],"RESULTS:":[80],"We":[81],"present":[82],"Dataset,":[86],"which":[87,149],"exposes":[88],"models\u2019":[90],"content":[91],"dereferencable":[94],"interlinked":[95],"dataset.":[96],"Dataset":[99,130],"makes":[100],"use":[101],"wealth":[104],"annotations":[106],"available":[107,153],"within":[108],"large":[110],"number":[111],"manually":[113],"curated":[114],"link":[117],"integrate":[119],"data":[120,160],"from":[123,161],"other":[124,138],"resources.":[125,141,163],"CONCLUSIONS:":[126],"The":[127],"provides":[131,165],"users":[132,155],"with":[133,137],"dataset":[135],"interoperable":[136],"semantic":[139],"It":[142],"supports":[143],"powerful":[144],"search":[145],"queries,":[146],"some":[147],"were":[150],"not":[151],"previously":[152],"allow":[157],"integration":[158],"multiple":[162],"This":[164],"distributed":[167],"platform":[168],"find":[170],"similar":[171],"for":[173],"comparison,":[174],"processing":[175],"enrichment.":[177]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":2}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
