{"id":"https://openalex.org/W4402071955","doi":"https://doi.org/10.1186/s12911-024-02654-5","title":"Special supplement issue on quality assurance and enrichment of biological and biomedical ontologies and terminologies","display_name":"Special supplement issue on quality assurance and enrichment of biological and biomedical ontologies and terminologies","publication_year":2024,"publication_date":"2024-08-30","ids":{"openalex":"https://openalex.org/W4402071955","doi":"https://doi.org/10.1186/s12911-024-02654-5","pmid":"https://pubmed.ncbi.nlm.nih.gov/39215285"},"language":"en","primary_location":{"id":"doi:10.1186/s12911-024-02654-5","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1186/s12911-024-02654-5","pdf_url":"https://link.springer.com/content/pdf/10.1186/s12911-024-02654-5.pdf","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"type":"editorial","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://link.springer.com/content/pdf/10.1186/s12911-024-02654-5.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049834185","display_name":"Licong Cui","orcid":"https://orcid.org/0000-0001-5549-8780"},"institutions":[{"id":"https://openalex.org/I4210159031","display_name":"The University of Texas Health Science Center","ror":"https://ror.org/05cwbxa29","country_code":"US","type":"education","lineage":["https://openalex.org/I4210159031"]},{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Licong Cui","raw_affiliation_strings":["McWilliams School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA. licong.cui@uth.tmc.edu","McWilliams School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"McWilliams School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA. licong.cui@uth.tmc.edu","institution_ids":["https://openalex.org/I4210159031"]},{"raw_affiliation_string":"McWilliams School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5103063911","display_name":"Ankur Agrawal","orcid":null},"institutions":[{"id":"https://openalex.org/I9224006","display_name":"St. Edward's University","ror":"https://ror.org/05n545h05","country_code":"US","type":"education","lineage":["https://openalex.org/I9224006"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ankur Agrawal","raw_affiliation_strings":["Department of Computer Science, St. Edward's University, Austin, TX, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, St. Edward's University, Austin, TX, USA","institution_ids":["https://openalex.org/I9224006"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5049834185"],"corresponding_institution_ids":["https://openalex.org/I4210159031","https://openalex.org/I919571938"],"apc_list":{"value":1570,"currency":"GBP","value_usd":1925},"apc_paid":{"value":1570,"currency":"GBP","value_usd":1925},"fwci":0.2385,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.57429264,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"23","issue":"S1","first_page":"302","last_page":"302"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9803000092506409,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.929099977016449,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/health-informatics","display_name":"Health informatics","score":0.7186140418052673},{"id":"https://openalex.org/keywords/quality-assurance","display_name":"Quality assurance","score":0.7117892503738403},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.5082878470420837},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.461503803730011},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.40915992856025696},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.32635217905044556},{"id":"https://openalex.org/keywords/public-health","display_name":"Public health","score":0.14882677793502808},{"id":"https://openalex.org/keywords/nursing","display_name":"Nursing","score":0.1224997341632843},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.10615143179893494}],"concepts":[{"id":"https://openalex.org/C145642194","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health informatics","level":3,"score":0.7186140418052673},{"id":"https://openalex.org/C106436119","wikidata":"https://www.wikidata.org/wiki/Q836575","display_name":"Quality assurance","level":3,"score":0.7117892503738403},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.5082878470420837},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.461503803730011},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.40915992856025696},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.32635217905044556},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.14882677793502808},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.1224997341632843},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.10615143179893494},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C2778618615","wikidata":"https://www.wikidata.org/wiki/Q4008393","display_name":"External quality assessment","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12911-024-02654-5","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1186/s12911-024-02654-5","pdf_url":"https://link.springer.com/content/pdf/10.1186/s12911-024-02654-5.pdf","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},{"id":"pmid:39215285","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39215285","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC medical informatics and decision making","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11363377","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11363377","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11363377/pdf/12911_2024_Article_2654.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Med Inform Decis Mak","raw_type":"Text"},{"id":"pmh:oai:digitalcommons.library.tmc.edu:uthshis_docs-1396","is_oa":false,"landing_page_url":"https://digitalcommons.library.tmc.edu/uthshis_docs/399","pdf_url":null,"source":{"id":"https://openalex.org/S4377196655","display_name":"Digital Commons-TMC (Texas Medical Center)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1337852284","host_organization_name":"Texas Medical Center","host_organization_lineage":["https://openalex.org/I1337852284"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faculty, Staff and Student Publications","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:3983dcce98fe4b568ab7be63dc5d06ec","is_oa":true,"landing_page_url":"https://doaj.org/article/3983dcce98fe4b568ab7be63dc5d06ec","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Informatics and Decision Making, Vol 23, Iss S1, Pp 1-4 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s12911-024-02654-5","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1186/s12911-024-02654-5","pdf_url":"https://link.springer.com/content/pdf/10.1186/s12911-024-02654-5.pdf","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4402071955.pdf"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W1481389199","https://openalex.org/W1974896839","https://openalex.org/W2078161054","https://openalex.org/W2144103767","https://openalex.org/W2156997379","https://openalex.org/W2302501749","https://openalex.org/W2404369708","https://openalex.org/W2609436323","https://openalex.org/W2791800558","https://openalex.org/W3048364465","https://openalex.org/W3111226055","https://openalex.org/W3173667512","https://openalex.org/W4321786194","https://openalex.org/W4376115772","https://openalex.org/W4376115817","https://openalex.org/W4376133701","https://openalex.org/W4385581897","https://openalex.org/W4385986002","https://openalex.org/W4389092170"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W3031052312","https://openalex.org/W4389568370","https://openalex.org/W3032375762","https://openalex.org/W1995515455","https://openalex.org/W2080531066","https://openalex.org/W3108674512","https://openalex.org/W1506200166","https://openalex.org/W1489783725","https://openalex.org/W2148612803"],"abstract_inverted_index":{"Ontologies":[0],"and":[1,17,27,64,68,71,104,133,138,147],"terminologies":[2],"serve":[3],"as":[4,81],"the":[5,24,38,125,130],"backbone":[6],"of":[7,29,41,52,66,78,83,95,114,135],"knowledge":[8],"representation":[9],"in":[10,56,98,145],"biomedical":[11,42,69,136,148],"domains,":[12],"facilitating":[13],"data":[14],"integration,":[15],"interoperability,":[16],"semantic":[18],"understanding":[19],"across":[20],"diverse":[21],"applications.":[22],"However,":[23],"quality":[25,62,85],"assurance":[26,63],"enrichment":[28,65],"these":[30,122],"resources":[31],"remain":[32],"an":[33,49],"ongoing":[34,126],"challenge":[35],"due":[36],"to":[37,110,128],"dynamic":[39],"nature":[40],"knowledge.":[43],"In":[44],"this":[45,57],"editorial,":[46],"we":[47],"provide":[48],"introductory":[50],"summary":[51],"seven":[53],"articles":[54,74],"included":[55],"special":[58],"supplement":[59],"issue":[60],"for":[61,88],"biological":[67],"ontologies":[70,137],"terminologies.":[72],"These":[73],"span":[75],"a":[76,106],"spectrum":[77],"topics,":[79],"such":[80],"development":[82],"automated":[84],"assessment":[86],"frameworks":[87],"Resource":[89],"Description":[90],"Framework":[91],"(RDF)":[92],"resources,":[93],"identification":[94],"missing":[96],"concepts":[97],"SNOMED":[99],"CT":[100],"through":[101],"logical":[102],"definitions,":[103],"developing":[105],"COVID":[107],"interface":[108],"terminology":[109],"enable":[111],"automatic":[112],"annotations":[113],"COVID-19":[115],"related":[116],"Electronic":[117],"Health":[118],"Records":[119],"(EHRs).":[120],"Collectively,":[121],"contributions":[123],"underscore":[124],"efforts":[127],"improve":[129],"accuracy,":[131],"consistency,":[132],"interoperability":[134],"terminologies,":[139],"thus":[140],"advancing":[141],"their":[142],"pivotal":[143],"role":[144],"healthcare":[146],"research.":[149]},"counts_by_year":[{"year":2024,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
