{"id":"https://openalex.org/W4402127072","doi":"https://doi.org/10.1186/s12911-024-02642-9","title":"Does combining numerous data types in multi-omics data improve or hinder performance in survival prediction? Insights from a large-scale benchmark study","display_name":"Does combining numerous data types in multi-omics data improve or hinder performance in survival prediction? Insights from a large-scale benchmark study","publication_year":2024,"publication_date":"2024-09-02","ids":{"openalex":"https://openalex.org/W4402127072","doi":"https://doi.org/10.1186/s12911-024-02642-9","pmid":"https://pubmed.ncbi.nlm.nih.gov/39223659"},"language":"en","primary_location":{"id":"doi:10.1186/s12911-024-02642-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-024-02642-9","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-024-02642-9","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-024-02642-9","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009943663","display_name":"Yingxia Li","orcid":"https://orcid.org/0000-0002-4501-5834"},"institutions":[{"id":"https://openalex.org/I169724904","display_name":"Zimmer Biomet (Netherlands)","ror":"https://ror.org/034k8cv93","country_code":"NL","type":"company","lineage":["https://openalex.org/I169724904","https://openalex.org/I4210115238"]},{"id":"https://openalex.org/I4210099379","display_name":"Zimmer Biomet (Germany)","ror":"https://ror.org/016731f38","country_code":"DE","type":"company","lineage":["https://openalex.org/I4210099379","https://openalex.org/I4210115238"]},{"id":"https://openalex.org/I8204097","display_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/05591te55","country_code":"DE","type":"education","lineage":["https://openalex.org/I8204097"]}],"countries":["DE","NL"],"is_corresponding":true,"raw_author_name":"Yingxia Li","raw_affiliation_strings":["Institute for Medical Information Processing, Biometry and Epidemiology, LMU Munich, Marchioninistr. 15, 81377, Munich, Germany. liyingxia1991@hotmail.com","Institute for Medical Information Processing, Biometry and Epidemiology, LMU Munich, Marchioninistr. 15, 81377, Munich, Germany"],"raw_orcid":"https://orcid.org/0000-0002-4501-5834","affiliations":[{"raw_affiliation_string":"Institute for Medical Information Processing, Biometry and Epidemiology, LMU Munich, Marchioninistr. 15, 81377, Munich, Germany. liyingxia1991@hotmail.com","institution_ids":["https://openalex.org/I169724904","https://openalex.org/I8204097"]},{"raw_affiliation_string":"Institute for Medical Information Processing, Biometry and Epidemiology, LMU Munich, Marchioninistr. 15, 81377, Munich, Germany","institution_ids":["https://openalex.org/I8204097","https://openalex.org/I4210099379"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085830409","display_name":"Tobias Herold","orcid":"https://orcid.org/0000-0002-9615-9432"},"institutions":[{"id":"https://openalex.org/I8204097","display_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/05591te55","country_code":"DE","type":"education","lineage":["https://openalex.org/I8204097"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Tobias Herold","raw_affiliation_strings":["Laboratory for Leukemia Diagnostics, Department of Medicine III, LMU University Hospital, LMU Munich, Munich, Germany"],"raw_orcid":"https://orcid.org/0000-0002-9615-9432","affiliations":[{"raw_affiliation_string":"Laboratory for Leukemia Diagnostics, Department of Medicine III, LMU University Hospital, LMU Munich, Munich, Germany","institution_ids":["https://openalex.org/I8204097"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057302175","display_name":"Ulrich Mansmann","orcid":"https://orcid.org/0000-0002-9955-8906"},"institutions":[{"id":"https://openalex.org/I4210099379","display_name":"Zimmer Biomet (Germany)","ror":"https://ror.org/016731f38","country_code":"DE","type":"company","lineage":["https://openalex.org/I4210099379","https://openalex.org/I4210115238"]},{"id":"https://openalex.org/I8204097","display_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/05591te55","country_code":"DE","type":"education","lineage":["https://openalex.org/I8204097"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ulrich Mansmann","raw_affiliation_strings":["Institute for Medical Information Processing, Biometry and Epidemiology, LMU Munich, Marchioninistr. 15, 81377, Munich, Germany"],"raw_orcid":"https://orcid.org/0000-0002-9955-8906","affiliations":[{"raw_affiliation_string":"Institute for Medical Information Processing, Biometry and Epidemiology, LMU Munich, Marchioninistr. 15, 81377, Munich, Germany","institution_ids":["https://openalex.org/I8204097","https://openalex.org/I4210099379"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048970390","display_name":"Roman Hornung","orcid":"https://orcid.org/0000-0002-6036-1495"},"institutions":[{"id":"https://openalex.org/I4210099379","display_name":"Zimmer Biomet (Germany)","ror":"https://ror.org/016731f38","country_code":"DE","type":"company","lineage":["https://openalex.org/I4210099379","https://openalex.org/I4210115238"]},{"id":"https://openalex.org/I4403386549","display_name":"Munich Center for Machine Learning","ror":"https://ror.org/02nfy3535","country_code":null,"type":"education","lineage":["https://openalex.org/I4403386549","https://openalex.org/I62916508","https://openalex.org/I8204097"]},{"id":"https://openalex.org/I8204097","display_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/05591te55","country_code":"DE","type":"education","lineage":["https://openalex.org/I8204097"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Roman Hornung","raw_affiliation_strings":["Institute for Medical Information Processing, Biometry and Epidemiology, LMU Munich, Marchioninistr. 15, 81377, Munich, Germany","Munich Center for Machine Learning (MCML), Munich, Germany"],"raw_orcid":"https://orcid.org/0000-0002-6036-1495","affiliations":[{"raw_affiliation_string":"Institute for Medical Information Processing, Biometry and Epidemiology, LMU Munich, Marchioninistr. 15, 81377, Munich, Germany","institution_ids":["https://openalex.org/I8204097","https://openalex.org/I4210099379"]},{"raw_affiliation_string":"Munich Center for Machine Learning (MCML), Munich, Germany","institution_ids":["https://openalex.org/I4403386549"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5009943663"],"corresponding_institution_ids":["https://openalex.org/I169724904","https://openalex.org/I4210099379","https://openalex.org/I8204097"],"apc_list":{"value":1570,"currency":"GBP","value_usd":1925},"apc_paid":{"value":1570,"currency":"GBP","value_usd":1925},"fwci":4.6932,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.95539051,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":99},"biblio":{"volume":"24","issue":"1","first_page":"244","last_page":"244"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.45489999651908875,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.45489999651908875,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.18520000576972961,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.07729999721050262,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.629168689250946},{"id":"https://openalex.org/keywords/omics","display_name":"Omics","score":0.5355778932571411},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5091380476951599},{"id":"https://openalex.org/keywords/leverage","display_name":"Leverage (statistics)","score":0.4849091172218323},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.47223708033561707},{"id":"https://openalex.org/keywords/data-type","display_name":"Data type","score":0.4592011868953705},{"id":"https://openalex.org/keywords/false-positive-paradox","display_name":"False positive paradox","score":0.4569634795188904},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.4125733971595764},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3969120681285858},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2872210144996643},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15885353088378906}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.629168689250946},{"id":"https://openalex.org/C157585117","wikidata":"https://www.wikidata.org/wiki/Q158666","display_name":"Omics","level":2,"score":0.5355778932571411},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5091380476951599},{"id":"https://openalex.org/C153083717","wikidata":"https://www.wikidata.org/wiki/Q6535263","display_name":"Leverage (statistics)","level":2,"score":0.4849091172218323},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.47223708033561707},{"id":"https://openalex.org/C138958017","wikidata":"https://www.wikidata.org/wiki/Q190087","display_name":"Data type","level":2,"score":0.4592011868953705},{"id":"https://openalex.org/C64869954","wikidata":"https://www.wikidata.org/wiki/Q1859747","display_name":"False positive paradox","level":2,"score":0.4569634795188904},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.4125733971595764},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3969120681285858},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2872210144996643},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15885353088378906},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000095028","descriptor_name":"Multiomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000401","qualifier_name":"mortality","is_major_topic":true},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016019","descriptor_name":"Survival Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016019","descriptor_name":"Survival Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016019","descriptor_name":"Survival Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016019","descriptor_name":"Survival Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016019","descriptor_name":"Survival Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019985","descriptor_name":"Benchmarking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12911-024-02642-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-024-02642-9","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-024-02642-9","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},{"id":"pmid:39223659","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39223659","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC medical informatics and decision making","raw_type":null},{"id":"pmh:oai:epub.ub.uni-muenchen.de:123127","is_oa":true,"landing_page_url":"http://nbn-resolving.de/urn:nbn:de:bvb:19-epub-123127-4","pdf_url":"https://epub.ub.uni-muenchen.de/123127/1/s12911-024-02642-9.pdf","source":{"id":"https://openalex.org/S4306401845","display_name":"Open access LMU (Ludwid Maxmilian's Universitat Munchen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I8204097","host_organization_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","host_organization_lineage":["https://openalex.org/I8204097"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"NonPeerReviewed"},{"id":"pmh:oai:frl.publisso.de:frl:6493746","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11370316","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11370316/pdf/12911_2024_Article_2642.pdf","source":{"id":"https://openalex.org/S4377196269","display_name":"PUBLISSO (German National Library of Medicine)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210112663","host_organization_name":"ZB MED - Information Centre for Life Sciences","host_organization_lineage":["https://openalex.org/I4210112663"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://lobid.org/resources/99370673400706441#!, 24(1):244","raw_type":"Zeitschriftenartikel"},{"id":"pmh:oai:doaj.org/article:8c88fb2b71bb45a5900d58b5e3b59e83","is_oa":true,"landing_page_url":"https://doaj.org/article/8c88fb2b71bb45a5900d58b5e3b59e83","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Informatics and Decision Making, Vol 24, Iss 1, Pp 1-14 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s12911-024-02642-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-024-02642-9","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-024-02642-9","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3769482513","display_name":null,"funder_award_id":"HO6422/1-2","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320322725","display_name":"China Scholarship Council","ror":"https://ror.org/04atp4p48"},{"id":"https://openalex.org/F4320323390","display_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/05591te55"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4402127072.pdf"},"referenced_works_count":61,"referenced_works":["https://openalex.org/W1167218379","https://openalex.org/W1757407923","https://openalex.org/W1825683159","https://openalex.org/W1896828031","https://openalex.org/W1966827022","https://openalex.org/W1986546598","https://openalex.org/W1992383350","https://openalex.org/W2030678916","https://openalex.org/W2043235003","https://openalex.org/W2044702943","https://openalex.org/W2050059289","https://openalex.org/W2052825782","https://openalex.org/W2066105836","https://openalex.org/W2083542829","https://openalex.org/W2084139018","https://openalex.org/W2097180277","https://openalex.org/W2110925561","https://openalex.org/W2114345835","https://openalex.org/W2117897510","https://openalex.org/W2120579447","https://openalex.org/W2134770445","https://openalex.org/W2134978098","https://openalex.org/W2135046866","https://openalex.org/W2149199519","https://openalex.org/W2158679766","https://openalex.org/W2168517816","https://openalex.org/W2169033570","https://openalex.org/W2258675270","https://openalex.org/W2329659234","https://openalex.org/W2606909288","https://openalex.org/W2611684441","https://openalex.org/W2771041964","https://openalex.org/W2791678231","https://openalex.org/W2795989238","https://openalex.org/W2803035327","https://openalex.org/W2906317964","https://openalex.org/W2911964244","https://openalex.org/W2913840411","https://openalex.org/W2962767950","https://openalex.org/W2987570851","https://openalex.org/W3009545736","https://openalex.org/W3042531629","https://openalex.org/W3080895935","https://openalex.org/W3147894994","https://openalex.org/W3173875945","https://openalex.org/W3176016422","https://openalex.org/W3180571536","https://openalex.org/W3201092639","https://openalex.org/W3216740588","https://openalex.org/W4200537922","https://openalex.org/W4285077411","https://openalex.org/W4301594934","https://openalex.org/W4317840276","https://openalex.org/W4366086369","https://openalex.org/W4366974966","https://openalex.org/W4379745448","https://openalex.org/W4384920706","https://openalex.org/W4390500913","https://openalex.org/W4391110749","https://openalex.org/W4391942283","https://openalex.org/W4392519763"],"related_works":["https://openalex.org/W2378211422","https://openalex.org/W1557094818","https://openalex.org/W2745001401","https://openalex.org/W4321353415","https://openalex.org/W2130974462","https://openalex.org/W2028665553","https://openalex.org/W2086519370","https://openalex.org/W972276598","https://openalex.org/W4319793051","https://openalex.org/W2970568952"],"abstract_inverted_index":{"BACKGROUND:":[0],"Predictive":[1],"modeling":[2],"based":[3],"on":[4,32],"multi-omics":[5,289,300],"data,":[6],"which":[7,268],"incorporates":[8],"several":[9],"types":[10,55,69,84,119,259,287,307],"of":[11,42,53,63,81,106,115,175,186,200,207,224,242,256,302],"omics":[12,82,285],"data":[13,35,54,68,83,118,150,220,228,244,258,286,306],"for":[14,91,194,231],"the":[15,38,51,61,77,103,139,162,173,184,187,198,239,254,271,279,296],"same":[16],"patients,":[17],"has":[18],"shown":[19],"potential":[20],"to":[21,154,202,212,246,313],"outperform":[22],"single-omics":[23],"predictive":[24,58,87,104,157,293],"modeling.":[25],"Most":[26],"research":[27],"in":[28,151,263,266,288,299],"this":[29,73,98],"domain":[30],"focuses":[31],"incorporating":[33,303],"numerous":[34],"types,":[36,238],"despite":[37],"complexity":[39],"and":[40,93,124,147,161,226,318],"cost":[41],"acquiring":[43],"them.":[44],"The":[45],"prevailing":[46,280],"assumption":[47],"is":[48,89],"that":[49,85,216,282],"increasing":[50],"number":[52,126,199],"necessarily":[56],"improves":[57,292],"performance.":[59,74,294],"However,":[60],"integration":[62],"less":[64],"informative":[65],"or":[66,221],"redundant":[67],"could":[70],"potentially":[71],"hinder":[72],"Therefore,":[75],"identifying":[76],"most":[78,232,260],"effective":[79],"combinations":[80,110],"enhance":[86],"performance":[88,105,169,273],"critical":[90],"cost-effective":[92],"accurate":[94],"predictions.":[95],"METHODS:":[96],"In":[97],"study,":[99],"we":[100,178,214],"systematically":[101],"evaluated":[102],"all":[107],"31":[108],"possible":[109,309],"including":[111],"at":[112,183],"least":[113],"one":[114],"five":[116],"genomic":[117],"(mRNA,":[120],"miRNA,":[121],"methylation,":[122],"DNAseq,":[123],"copy":[125],"variation)":[127],"using":[128,217],"14":[129],"cancer":[130,233,237],"datasets":[131],"with":[132],"right-censored":[133],"survival":[134,290],"outcomes,":[135],"publicly":[136],"available":[137],"from":[138,251],"TCGA":[140],"database.":[141],"We":[142],"employed":[143],"various":[144],"prediction":[145,248,291,301,316],"methods":[146],"up-weighted":[148],"clinical":[149],"every":[152],"model":[153],"leverage":[155],"their":[156],"importance.":[158],"Harrell's":[159],"C-index":[160],"integrated":[163],"Brier":[164],"Score":[165],"were":[166],"used":[167],"as":[168,304,308],"measures.":[170,274],"To":[171],"assess":[172],"robustness":[174],"our":[176],"findings,":[177],"performed":[179],"a":[180,204,222,264],"bootstrap":[181],"analysis":[182],"level":[185],"included":[188],"datasets.":[189],"Statistical":[190],"testing":[191],"was":[192,229],"conducted":[193],"key":[195],"results,":[196],"limiting":[197],"tests":[201],"ensure":[203],"low":[205],"risk":[206],"false":[208],"positives.":[209],"RESULTS:":[210],"Contrary":[211],"expectations,":[213],"found":[215],"only":[218],"mRNA":[219,225],"combination":[223],"miRNA":[227],"sufficient":[230],"types.":[234],"For":[235],"some":[236],"additional":[240],"inclusion":[241],"methylation":[243],"led":[245],"improved":[247],"results.":[249],"Far":[250],"enhancing":[252],"performance,":[253,267],"introduction":[255],"more":[257],"often":[261],"resulted":[262],"decline":[265],"varied":[269],"between":[270],"two":[272],"CONCLUSIONS:":[275],"Our":[276],"findings":[277],"challenge":[278],"notion":[281],"combining":[283],"multiple":[284],"Thus,":[295],"widespread":[297],"approach":[298],"many":[305],"should":[310],"be":[311],"reconsidered":[312],"avoid":[314],"suboptimal":[315],"results":[317],"unnecessary":[319],"expenditure.":[320]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":10}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
