{"id":"https://openalex.org/W4401173318","doi":"https://doi.org/10.1186/s12911-024-02615-y","title":"An ontology-based tool for modeling and documenting events in neurosurgery","display_name":"An ontology-based tool for modeling and documenting events in neurosurgery","publication_year":2024,"publication_date":"2024-07-31","ids":{"openalex":"https://openalex.org/W4401173318","doi":"https://doi.org/10.1186/s12911-024-02615-y","pmid":"https://pubmed.ncbi.nlm.nih.gov/39085883"},"language":"en","primary_location":{"id":"doi:10.1186/s12911-024-02615-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-024-02615-y","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-024-02615-y","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-024-02615-y","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086873102","display_name":"Patricia Romao","orcid":null},"institutions":[{"id":"https://openalex.org/I130692619","display_name":"Bern University of Applied Sciences","ror":"https://ror.org/02bnkt322","country_code":"CH","type":"education","lineage":["https://openalex.org/I130692619"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Patricia Romao","raw_affiliation_strings":["Bern University of Applied Sciences, Bern, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bern University of Applied Sciences, Bern, Switzerland","institution_ids":["https://openalex.org/I130692619"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071246338","display_name":"Stefanie Neuenschwander","orcid":null},"institutions":[{"id":"https://openalex.org/I130692619","display_name":"Bern University of Applied Sciences","ror":"https://ror.org/02bnkt322","country_code":"CH","type":"education","lineage":["https://openalex.org/I130692619"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Stefanie Neuenschwander","raw_affiliation_strings":["Bern University of Applied Sciences, Bern, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bern University of Applied Sciences, Bern, Switzerland","institution_ids":["https://openalex.org/I130692619"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060262321","display_name":"Chantal Zbinden","orcid":"https://orcid.org/0000-0001-9402-895X"},"institutions":[{"id":"https://openalex.org/I2801112126","display_name":"University Hospital of Bern","ror":"https://ror.org/01q9sj412","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I2801112126"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Chantal Zbinden","raw_affiliation_strings":["Department of Neurosurgery, Inselspital, University Hospital, Bern, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Neurosurgery, Inselspital, University Hospital, Bern, Switzerland","institution_ids":["https://openalex.org/I2801112126"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020186815","display_name":"Kathleen Seidel","orcid":"https://orcid.org/0000-0002-7360-3852"},"institutions":[{"id":"https://openalex.org/I2801112126","display_name":"University Hospital of Bern","ror":"https://ror.org/01q9sj412","country_code":"CH","type":"healthcare","lineage":["https://openalex.org/I2801112126"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Kathleen Seidel","raw_affiliation_strings":["Department of Neurosurgery, Inselspital, University Hospital, Bern, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Neurosurgery, Inselspital, University Hospital, Bern, Switzerland","institution_ids":["https://openalex.org/I2801112126"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021788298","display_name":"Murat Sariyar","orcid":"https://orcid.org/0000-0002-5595-689X"},"institutions":[{"id":"https://openalex.org/I130692619","display_name":"Bern University of Applied Sciences","ror":"https://ror.org/02bnkt322","country_code":"CH","type":"education","lineage":["https://openalex.org/I130692619"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Murat Sariyar","raw_affiliation_strings":["Bern University of Applied Sciences, Bern, Switzerland. murat.sariyar@bfh.ch","Bern University of Applied Sciences, Bern, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bern University of Applied Sciences, Bern, Switzerland. murat.sariyar@bfh.ch","institution_ids":["https://openalex.org/I130692619"]},{"raw_affiliation_string":"Bern University of Applied Sciences, Bern, Switzerland","institution_ids":["https://openalex.org/I130692619"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5021788298"],"corresponding_institution_ids":["https://openalex.org/I130692619"],"apc_list":{"value":1570,"currency":"GBP","value_usd":1925},"apc_paid":{"value":1570,"currency":"GBP","value_usd":1925},"fwci":1.4579,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.82044907,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":95,"max":98},"biblio":{"volume":"24","issue":"1","first_page":"216","last_page":"216"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13248","display_name":"Healthcare Technology and Patient Monitoring","score":0.11720000207424164,"subfield":{"id":"https://openalex.org/subfields/2746","display_name":"Surgery"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T13248","display_name":"Healthcare Technology and Patient Monitoring","score":0.11720000207424164,"subfield":{"id":"https://openalex.org/subfields/2746","display_name":"Surgery"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.10270000249147415,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10706","display_name":"Traumatic Brain Injury and Neurovascular Disturbances","score":0.07259999960660934,"subfield":{"id":"https://openalex.org/subfields/2728","display_name":"Neurology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.8090502023696899},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.7199444770812988},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7170974016189575},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.48418667912483215},{"id":"https://openalex.org/keywords/open-biomedical-ontologies","display_name":"Open Biomedical Ontologies","score":0.41724205017089844},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3776119351387024},{"id":"https://openalex.org/keywords/process-ontology","display_name":"Process ontology","score":0.36034834384918213},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.34688931703567505},{"id":"https://openalex.org/keywords/ontology-alignment","display_name":"Ontology alignment","score":0.26564544439315796},{"id":"https://openalex.org/keywords/domain-knowledge","display_name":"Domain knowledge","score":0.11171752214431763}],"concepts":[{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.8090502023696899},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.7199444770812988},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7170974016189575},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.48418667912483215},{"id":"https://openalex.org/C137982476","wikidata":"https://www.wikidata.org/wiki/Q7072326","display_name":"Open Biomedical Ontologies","level":5,"score":0.41724205017089844},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3776119351387024},{"id":"https://openalex.org/C137003198","wikidata":"https://www.wikidata.org/wiki/Q7247296","display_name":"Process ontology","level":3,"score":0.36034834384918213},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.34688931703567505},{"id":"https://openalex.org/C98893333","wikidata":"https://www.wikidata.org/wiki/Q4339878","display_name":"Ontology alignment","level":4,"score":0.26564544439315796},{"id":"https://openalex.org/C207685749","wikidata":"https://www.wikidata.org/wiki/Q2088941","display_name":"Domain knowledge","level":2,"score":0.11171752214431763},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D004282","descriptor_name":"Documentation","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019635","descriptor_name":"Neurosurgical Procedures","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D019635","descriptor_name":"Neurosurgical Procedures","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D019635","descriptor_name":"Neurosurgical Procedures","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D019635","descriptor_name":"Neurosurgical Procedures","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D019635","descriptor_name":"Neurosurgical Procedures","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12911-024-02615-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-024-02615-y","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-024-02615-y","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},{"id":"pmid:39085883","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39085883","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC medical informatics and decision making","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11293115","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11293115","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11293115/pdf/12911_2024_Article_2615.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Med Inform Decis Mak","raw_type":"Text"},{"id":"pmh:oai:boris.unibe.ch:199426","is_oa":true,"landing_page_url":"https://boris.unibe.ch/199426/","pdf_url":null,"source":{"id":"https://openalex.org/S4306401086","display_name":"Bern Open Repository and Information System (University of Bern)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I118564535","host_organization_name":"University of Bern","host_organization_lineage":["https://openalex.org/I118564535"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Romao, Patricia; Neuenschwander, Stefanie; Zbinden, Chantal; Seidel, Kathleen; Sariyar, Murat (2024). An ontology-based tool for modeling and documenting events in neurosurgery. BMC medical informatics and decision making, 24(1), p. 216. BioMed Central 10.1186/s12911-024-02615-y &lt;http://dx.doi.org/10.1186/s12911-024-02615-y&gt;","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:a714082d88594c858dd2e8792850688a","is_oa":false,"landing_page_url":"https://doaj.org/article/a714082d88594c858dd2e8792850688a","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Informatics and Decision Making, Vol 24, Iss 1, Pp 1-17 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s12911-024-02615-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-024-02615-y","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-024-02615-y","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4401173318.pdf","grobid_xml":"https://content.openalex.org/works/W4401173318.grobid-xml"},"referenced_works_count":56,"referenced_works":["https://openalex.org/W5067071","https://openalex.org/W102398446","https://openalex.org/W220935706","https://openalex.org/W1539541734","https://openalex.org/W1574496698","https://openalex.org/W1586942737","https://openalex.org/W1601038846","https://openalex.org/W1654805921","https://openalex.org/W1802346448","https://openalex.org/W1928035523","https://openalex.org/W1933581715","https://openalex.org/W1965446264","https://openalex.org/W1981732549","https://openalex.org/W1995260118","https://openalex.org/W1997733307","https://openalex.org/W2021074129","https://openalex.org/W2032578329","https://openalex.org/W2081580037","https://openalex.org/W2100101829","https://openalex.org/W2129826770","https://openalex.org/W2138903443","https://openalex.org/W2141201603","https://openalex.org/W2144580701","https://openalex.org/W2162124237","https://openalex.org/W2402283873","https://openalex.org/W2405033759","https://openalex.org/W2418838540","https://openalex.org/W2565713920","https://openalex.org/W2766643012","https://openalex.org/W2810359661","https://openalex.org/W2884361029","https://openalex.org/W2887897505","https://openalex.org/W2894001066","https://openalex.org/W2943098202","https://openalex.org/W2965518110","https://openalex.org/W2970819616","https://openalex.org/W2999653342","https://openalex.org/W3038634159","https://openalex.org/W3092613928","https://openalex.org/W3093404842","https://openalex.org/W3156205718","https://openalex.org/W3164387494","https://openalex.org/W3170403204","https://openalex.org/W3170771812","https://openalex.org/W3180045172","https://openalex.org/W3206432747","https://openalex.org/W3216256135","https://openalex.org/W4206670227","https://openalex.org/W4206811646","https://openalex.org/W4214518538","https://openalex.org/W4226409811","https://openalex.org/W4233652458","https://openalex.org/W4244892278","https://openalex.org/W4291795780","https://openalex.org/W4386936371","https://openalex.org/W6635105693"],"related_works":["https://openalex.org/W1506177826","https://openalex.org/W2127299687","https://openalex.org/W2726617685","https://openalex.org/W2532736362","https://openalex.org/W4255991504","https://openalex.org/W1794266373","https://openalex.org/W2399880385","https://openalex.org/W2008629522","https://openalex.org/W2159818280","https://openalex.org/W2357775360"],"abstract_inverted_index":{"BACKGROUND:":[0],"Intraoperative":[1],"neurophysiological":[2],"monitoring":[3],"(IOM)":[4],"plays":[5],"a":[6,111,122,278],"pivotal":[7],"role":[8],"in":[9],"enhancing":[10],"patient":[11,300],"safety":[12],"during":[13,152],"neurosurgical":[14],"procedures.":[15],"This":[16,55,134],"vital":[17],"technique":[18],"involves":[19],"the":[20,32,40,45,70,73,79,91,96,116,144,156,163,172,200,206,212,230,233,242,249,261,275,291,295,304,313,344],"continuous":[21],"measurement":[22],"of":[23,34,39,48,72,171,178,192,203,277,297,346],"evoked":[24],"potentials":[25],"to":[26,58,114,139,161,220,293,317,335],"provide":[27],"early":[28],"warnings":[29],"and":[30,78,100,119,147,187,190,211,232,245,264,280,321],"ensure":[31,162],"preservation":[33],"critical":[35],"neural":[36],"structures.":[37],"One":[38],"primary":[41],"challenges":[42],"has":[43],"been":[44],"effective":[46],"documentation":[47,132,329],"IOM":[49,74,285],"events":[50],"with":[51,239,343],"semantically":[52,314],"enriched":[53,315],"characterizations.":[54],"study":[56],"aimed":[57],"address":[59,336],"this":[60,153],"challenge":[61],"by":[62,183,302],"developing":[63],"an":[64],"ontology-based":[65,288,331],"tool.":[66],"METHODS:":[67],"We":[68],"structured":[69,279],"development":[71],"Documentation":[75],"Ontology":[76,209,345],"(IOMDO)":[77],"associated":[80,234,342],"tool":[81,226,289],"into":[82,197],"three":[83],"distinct":[84],"phases.":[85],"The":[86,104,124,149,168,224,252],"initial":[87],"phase":[88,106,126,154],"focused":[89],"on":[90],"ontology's":[92],"creation,":[93],"drawing":[94],"from":[95],"OBO":[97],"(Open":[98],"Biological":[99],"Biomedical":[101],"Ontology)":[102],"principles.":[103],"subsequent":[105],"involved":[107,255],"agile":[108],"software":[109,225],"development,":[110],"flexible":[112],"approach":[113],"encapsulate":[115],"diverse":[117],"requirements":[118],"swiftly":[120],"produce":[121],"prototype.":[123],"last":[125],"entailed":[127],"practical":[128],"evaluation":[129,254],"within":[130],"real-world":[131],"settings.":[133],"crucial":[135,334],"stage":[136],"enabled":[137],"us":[138],"gather":[140],"firsthand":[141],"insights,":[142],"assessing":[143],"tool's":[145,164,253],"functionality":[146],"efficacy.":[148],"observations":[150],"made":[151],"formed":[155],"basis":[157],"for":[158,214,228,241,248,267,283,306,323],"essential":[159],"adjustments":[160],"productive":[165],"utilization.":[166],"RESULTS:":[167],"core":[169],"entities":[170],"ontology":[173,213,231],"revolve":[174],"around":[175],"central":[176],"aspects":[177],"IOM,":[179],"including":[180],"measurements":[181],"characterized":[182],"timestamp,":[184],"type,":[185],"values,":[186],"location.":[188],"Concepts":[189],"terms":[191],"several":[193],"ontologies":[194],"were":[195],"integrated":[196],"IOMDO,":[198],"e.g.,":[199],"Foundation":[201],"Model":[202],"Anatomy":[204],"(FMA),":[205],"Human":[207],"Phenotype":[208],"(HPO)":[210],"surgical":[215,222,324],"process":[216],"models":[217],"(OntoSPM)":[218],"related":[219],"general":[221],"terms.":[223],"developed":[227],"extending":[229],"knowledge":[235],"base":[236],"was":[237],"built":[238],"JavaFX":[240],"user-friendly":[243],"frontend":[244],"Apache":[246],"Jena":[247],"robust":[250],"backend.":[251],"test":[256],"users":[257],"who":[258],"unanimously":[259],"found":[260],"interface":[262],"accessible":[263],"usable,":[265],"even":[266],"those":[268],"without":[269],"extensive":[270],"technical":[271],"expertise.":[272],"CONCLUSIONS:":[273],"Through":[274],"establishment":[276],"standardized":[281],"framework":[282],"characterizing":[284],"events,":[286],"our":[287],"holds":[290],"potential":[292,337],"enhance":[294],"quality":[296],"documentation,":[298],"benefiting":[299],"care":[301],"improving":[303],"foundation":[305],"informed":[307],"decision-making.":[308],"Furthermore,":[309],"researchers":[310],"can":[311],"leverage":[312],"data":[316],"identify":[318],"trends,":[319],"patterns,":[320],"areas":[322],"practice":[325],"enhancement.":[326],"To":[327],"optimize":[328],"through":[330],"approaches,":[332],"it's":[333],"modeling":[338],"issues":[339],"that":[340],"are":[341],"Adverse":[347],"Events.":[348]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2}],"updated_date":"2026-06-17T06:14:20.161405","created_date":"2025-10-10T00:00:00"}
