{"id":"https://openalex.org/W4320727363","doi":"https://doi.org/10.1186/s12911-023-02127-1","title":"Subsequence and distant supervision based active learning for relation extraction of Chinese medical texts","display_name":"Subsequence and distant supervision based active learning for relation extraction of Chinese medical texts","publication_year":2023,"publication_date":"2023-02-14","ids":{"openalex":"https://openalex.org/W4320727363","doi":"https://doi.org/10.1186/s12911-023-02127-1","pmid":"https://pubmed.ncbi.nlm.nih.gov/36788504"},"language":"en","primary_location":{"id":"doi:10.1186/s12911-023-02127-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-023-02127-1","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-023-02127-1","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-023-02127-1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101718939","display_name":"Qi Ye","orcid":"https://orcid.org/0000-0003-2512-1266"},"institutions":[{"id":"https://openalex.org/I143593769","display_name":"East China University of Science and Technology","ror":"https://ror.org/01vyrm377","country_code":"CN","type":"education","lineage":["https://openalex.org/I143593769"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Qi Ye","raw_affiliation_strings":["School of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China. yeh_qi1125@ecust.edu.cn","School of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China. yeh_qi1125@ecust.edu.cn","institution_ids":["https://openalex.org/I143593769"]},{"raw_affiliation_string":"School of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China","institution_ids":["https://openalex.org/I143593769"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101477345","display_name":"Tingting Cai","orcid":"https://orcid.org/0000-0003-1014-5636"},"institutions":[{"id":"https://openalex.org/I143593769","display_name":"East China University of Science and Technology","ror":"https://ror.org/01vyrm377","country_code":"CN","type":"education","lineage":["https://openalex.org/I143593769"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tingting Cai","raw_affiliation_strings":["School of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China","institution_ids":["https://openalex.org/I143593769"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100718017","display_name":"Xiang Ji","orcid":"https://orcid.org/0000-0002-7234-6460"},"institutions":[{"id":"https://openalex.org/I143593769","display_name":"East China University of Science and Technology","ror":"https://ror.org/01vyrm377","country_code":"CN","type":"education","lineage":["https://openalex.org/I143593769"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiang Ji","raw_affiliation_strings":["School of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China","institution_ids":["https://openalex.org/I143593769"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005820786","display_name":"Tong Ruan","orcid":"https://orcid.org/0000-0002-3546-8338"},"institutions":[{"id":"https://openalex.org/I143593769","display_name":"East China University of Science and Technology","ror":"https://ror.org/01vyrm377","country_code":"CN","type":"education","lineage":["https://openalex.org/I143593769"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tong Ruan","raw_affiliation_strings":["School of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China","institution_ids":["https://openalex.org/I143593769"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101544974","display_name":"Hong Zheng","orcid":"https://orcid.org/0000-0002-3909-7626"},"institutions":[{"id":"https://openalex.org/I143593769","display_name":"East China University of Science and Technology","ror":"https://ror.org/01vyrm377","country_code":"CN","type":"education","lineage":["https://openalex.org/I143593769"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hong Zheng","raw_affiliation_strings":["School of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Science and Technology, East China University of Science and Technology, Shanghai, 200237, China","institution_ids":["https://openalex.org/I143593769"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5101718939"],"corresponding_institution_ids":["https://openalex.org/I143593769"],"apc_list":{"value":2690,"currency":"USD","value_usd":2690},"apc_paid":{"value":2690,"currency":"USD","value_usd":2690},"fwci":0.5637,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.705751,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"23","issue":"1","first_page":"34","last_page":"34"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10181","display_name":"Natural Language Processing Techniques","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9853000044822693,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/subsequence","display_name":"Subsequence","score":0.7656155824661255},{"id":"https://openalex.org/keywords/health-informatics","display_name":"Health informatics","score":0.7407279014587402},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6482177972793579},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.5380446910858154},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.4577641785144806},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.41579926013946533},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.40103545784950256},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2283666729927063},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2118053436279297},{"id":"https://openalex.org/keywords/public-health","display_name":"Public health","score":0.11546823382377625},{"id":"https://openalex.org/keywords/nursing","display_name":"Nursing","score":0.09975636005401611},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.07948210835456848}],"concepts":[{"id":"https://openalex.org/C137877099","wikidata":"https://www.wikidata.org/wiki/Q1332977","display_name":"Subsequence","level":3,"score":0.7656155824661255},{"id":"https://openalex.org/C145642194","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health informatics","level":3,"score":0.7407279014587402},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6482177972793579},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.5380446910858154},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.4577641785144806},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.41579926013946533},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.40103545784950256},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2283666729927063},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2118053436279297},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.11546823382377625},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.09975636005401611},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.07948210835456848},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C34388435","wikidata":"https://www.wikidata.org/wiki/Q2267362","display_name":"Bounded function","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002681","descriptor_name":"China","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002681","descriptor_name":"China","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002681","descriptor_name":"China","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012014","descriptor_name":"Reference Books, Medical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012014","descriptor_name":"Reference Books, Medical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012014","descriptor_name":"Reference Books, Medical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018794","descriptor_name":"Problem-Based Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018794","descriptor_name":"Problem-Based Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018794","descriptor_name":"Problem-Based Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12911-023-02127-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-023-02127-1","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-023-02127-1","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},{"id":"pmid:36788504","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36788504","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC medical informatics and decision making","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9926422","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9926422","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC9926422/pdf/12911_2023_Article_2127.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Med Inform Decis Mak","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:e323d7333dbd4205846017eb63c3560c","is_oa":true,"landing_page_url":"https://doaj.org/article/e323d7333dbd4205846017eb63c3560c","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Informatics and Decision Making, Vol 23, Iss 1, Pp 1-12 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s12911-023-02127-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-023-02127-1","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-023-02127-1","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8100000023841858,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G5027756617","display_name":null,"funder_award_id":"2021YFC2701801","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G7213690121","display_name":null,"funder_award_id":"2021YFC2701800, 2021YFC2701801","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G8861974012","display_name":null,"funder_award_id":"2021YFC2701800","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4320727363.pdf"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W2103330371","https://openalex.org/W2117763124","https://openalex.org/W2128518360","https://openalex.org/W2147880316","https://openalex.org/W2154185977","https://openalex.org/W2251622960","https://openalex.org/W2252069213","https://openalex.org/W2539469848","https://openalex.org/W2593890499","https://openalex.org/W2785787385","https://openalex.org/W2799268396","https://openalex.org/W2808142148","https://openalex.org/W2893319621","https://openalex.org/W2977316918","https://openalex.org/W3001060565","https://openalex.org/W3004844052","https://openalex.org/W3021636956","https://openalex.org/W3035559300","https://openalex.org/W3092364978","https://openalex.org/W3094749631","https://openalex.org/W3102725307","https://openalex.org/W3105063288","https://openalex.org/W3106616051","https://openalex.org/W3117168610","https://openalex.org/W3121137019","https://openalex.org/W3156031277","https://openalex.org/W3167136668","https://openalex.org/W3169341408","https://openalex.org/W3174278275","https://openalex.org/W3178021032","https://openalex.org/W3186054896","https://openalex.org/W3194836374","https://openalex.org/W3212955044","https://openalex.org/W4205454697","https://openalex.org/W4283691837","https://openalex.org/W4288071690","https://openalex.org/W6604832393"],"related_works":["https://openalex.org/W2996768723","https://openalex.org/W4212895949","https://openalex.org/W4230102134","https://openalex.org/W4247866870","https://openalex.org/W2112772040","https://openalex.org/W3216774880","https://openalex.org/W2078387789","https://openalex.org/W2051502035","https://openalex.org/W2075403678","https://openalex.org/W2185222616"],"abstract_inverted_index":{"In":[0],"recent":[1],"years,":[2],"relation":[3,17,129],"extraction":[4,18,130],"on":[5,115,138],"unstructured":[6],"texts":[7,92],"has":[8],"become":[9],"an":[10],"important":[11],"task":[12],"in":[13,81,97,131],"medical":[14,133],"research.":[15],"However,":[16],"requires":[19],"a":[20,54,73,98,125],"large":[21],"amount":[22],"of":[23,48,56,77,118],"labeled":[24,90],"corpus,":[25],"manually":[26],"annotating":[27,40],"sequences":[28,41],"is":[29,66,101,160],"time":[30],"consuming":[31],"and":[32,36,58,93,104,106],"expensive.":[33],"Therefore,":[34],"efficient":[35],"economical":[37],"methods":[38],"for":[39,128],"are":[42],"required":[43],"to":[44,147],"ensure":[45],"the":[46,78,86,89,108,116,122,139,143,151],"performance":[47,145],"relational":[49],"extraction.":[50],"This":[51],"paper":[52],"proposes":[53],"method":[55,65,87,123],"subsequence":[57,91],"distant":[59,119],"supervision":[60],"based":[61,114],"active":[62,83],"learning.":[63,84],"The":[64],"annotated":[67],"by":[68],"selecting":[69],"information-rich":[70],"subsequences":[71],"as":[72],"sampling":[74,158],"unit":[75],"instead":[76],"full":[79],"sentences":[80],"traditional":[82],"Additionally,":[85],"saves":[88],"their":[94],"corresponding":[95],"labels":[96],"dictionary":[99],"which":[100],"continuously":[102],"updated":[103],"maintained,":[105],"pre-labels":[107],"unlabeled":[109],"set":[110],"through":[111],"text":[112],"matching":[113],"idea":[117],"supervision.":[120],"Finally,":[121],"combines":[124],"Chinese-RoBERTa-CRF":[126],"model":[127],"Chinese":[132],"texts.":[134],"Experimental":[135],"results":[136],"test":[137],"CMeIE":[140],"dataset":[141],"achieves":[142],"best":[144,152],"compared":[146],"existing":[148],"methods.":[149],"And":[150],"F1":[153],"value":[154],"obtained":[155],"between":[156],"different":[157],"strategies":[159],"55.96%.":[161]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2023,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
