{"id":"https://openalex.org/W4220716821","doi":"https://doi.org/10.1186/s12911-022-01810-z","title":"Extracting clinical named entity for pituitary adenomas from Chinese electronic medical records","display_name":"Extracting clinical named entity for pituitary adenomas from Chinese electronic medical records","publication_year":2022,"publication_date":"2022-03-23","ids":{"openalex":"https://openalex.org/W4220716821","doi":"https://doi.org/10.1186/s12911-022-01810-z","pmid":"https://pubmed.ncbi.nlm.nih.gov/35321705"},"language":"en","primary_location":{"id":"doi:10.1186/s12911-022-01810-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-022-01810-z","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-022-01810-z","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-022-01810-z","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5026734857","display_name":"An Fang","orcid":"https://orcid.org/0000-0002-9526-9306"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]},{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"An Fang","raw_affiliation_strings":["Institute of Medical Information, Chinese Academy of Medical Sciences, No. 3 Yabao Road, Beijing, 100020, China","Life Science College, Central South University, No. 932 South Lushan Road, Changsha, 410083, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Information, Chinese Academy of Medical Sciences, No. 3 Yabao Road, Beijing, 100020, China","institution_ids":["https://openalex.org/I200296433"]},{"raw_affiliation_string":"Life Science College, Central South University, No. 932 South Lushan Road, Changsha, 410083, China","institution_ids":["https://openalex.org/I139660479"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100702756","display_name":"Jiahui Hu","orcid":"https://orcid.org/0000-0003-4352-3250"},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiahui Hu","raw_affiliation_strings":["Institute of Medical Information, Chinese Academy of Medical Sciences, No. 3 Yabao Road, Beijing, 100020, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Information, Chinese Academy of Medical Sciences, No. 3 Yabao Road, Beijing, 100020, China","institution_ids":["https://openalex.org/I200296433"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015583181","display_name":"Wanqing Zhao","orcid":"https://orcid.org/0000-0003-3705-5737"},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wanqing Zhao","raw_affiliation_strings":["Institute of Medical Information, Chinese Academy of Medical Sciences, No. 3 Yabao Road, Beijing, 100020, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Information, Chinese Academy of Medical Sciences, No. 3 Yabao Road, Beijing, 100020, China","institution_ids":["https://openalex.org/I200296433"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026070862","display_name":"Ming Feng","orcid":"https://orcid.org/0000-0001-9943-5941"},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]},{"id":"https://openalex.org/I2801228662","display_name":"Peking Union Medical College Hospital","ror":"https://ror.org/04jztag35","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2801228662"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ming Feng","raw_affiliation_strings":["Dongcheng District, Peking Union Medical College Hospital, No. 1 Shuaifuyuan, Beijing, 100730, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dongcheng District, Peking Union Medical College Hospital, No. 1 Shuaifuyuan, Beijing, 100730, China","institution_ids":["https://openalex.org/I200296433","https://openalex.org/I2801228662"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103695103","display_name":"Ji Fu","orcid":null},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]},{"id":"https://openalex.org/I2801228662","display_name":"Peking Union Medical College Hospital","ror":"https://ror.org/04jztag35","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2801228662"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ji Fu","raw_affiliation_strings":["Dongcheng District, Peking Union Medical College Hospital, No. 1 Shuaifuyuan, Beijing, 100730, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dongcheng District, Peking Union Medical College Hospital, No. 1 Shuaifuyuan, Beijing, 100730, China","institution_ids":["https://openalex.org/I200296433","https://openalex.org/I2801228662"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022608503","display_name":"Shanshan Feng","orcid":"https://orcid.org/0000-0003-1232-8719"},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]},{"id":"https://openalex.org/I2801228662","display_name":"Peking Union Medical College Hospital","ror":"https://ror.org/04jztag35","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2801228662"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shanshan Feng","raw_affiliation_strings":["Dongcheng District, Peking Union Medical College Hospital, No. 1 Shuaifuyuan, Beijing, 100730, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dongcheng District, Peking Union Medical College Hospital, No. 1 Shuaifuyuan, Beijing, 100730, China","institution_ids":["https://openalex.org/I200296433","https://openalex.org/I2801228662"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080567080","display_name":"Pei Lou","orcid":"https://orcid.org/0000-0003-1426-670X"},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Pei Lou","raw_affiliation_strings":["Institute of Medical Information, Chinese Academy of Medical Sciences, No. 3 Yabao Road, Beijing, 100020, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Information, Chinese Academy of Medical Sciences, No. 3 Yabao Road, Beijing, 100020, China","institution_ids":["https://openalex.org/I200296433"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103040816","display_name":"Huiling Ren","orcid":"https://orcid.org/0000-0002-6043-1414"},"institutions":[{"id":"https://openalex.org/I200296433","display_name":"Chinese Academy of Medical Sciences & Peking Union Medical College","ror":"https://ror.org/02drdmm93","country_code":"CN","type":"education","lineage":["https://openalex.org/I200296433"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huiling Ren","raw_affiliation_strings":["Institute of Medical Information, Chinese Academy of Medical Sciences, No. 3 Yabao Road, Beijing, 100020, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Medical Information, Chinese Academy of Medical Sciences, No. 3 Yabao Road, Beijing, 100020, China","institution_ids":["https://openalex.org/I200296433"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003654071","display_name":"Xianlai Chen","orcid":"https://orcid.org/0000-0002-4338-015X"},"institutions":[{"id":"https://openalex.org/I139660479","display_name":"Central South University","ror":"https://ror.org/00f1zfq44","country_code":"CN","type":"education","lineage":["https://openalex.org/I139660479"]},{"id":"https://openalex.org/I48168531","display_name":"South University","ror":"https://ror.org/01rjfjt94","country_code":"US","type":"education","lineage":["https://openalex.org/I48168531"]}],"countries":["CN","US"],"is_corresponding":true,"raw_author_name":"Xianlai Chen","raw_affiliation_strings":["Big Data Institute, Central South University, No. 932 South Lushan Road, Changsha, 410083, China. chenxianlai@csu.edu.cn","National Engineering Lab for Medical Big Data Application Technology, Central South University, No. 932 South Lushan Road, Changsha, 410083, China. chenxianlai@csu.edu.cn","Big Data Institute, Central South University, No. 932 South Lushan Road, Changsha, 410083, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Big Data Institute, Central South University, No. 932 South Lushan Road, Changsha, 410083, China. chenxianlai@csu.edu.cn","institution_ids":["https://openalex.org/I139660479","https://openalex.org/I48168531"]},{"raw_affiliation_string":"National Engineering Lab for Medical Big Data Application Technology, Central South University, No. 932 South Lushan Road, Changsha, 410083, China. chenxianlai@csu.edu.cn","institution_ids":["https://openalex.org/I139660479"]},{"raw_affiliation_string":"Big Data Institute, Central South University, No. 932 South Lushan Road, Changsha, 410083, China","institution_ids":["https://openalex.org/I139660479"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5003654071"],"corresponding_institution_ids":["https://openalex.org/I139660479","https://openalex.org/I48168531"],"apc_list":{"value":1570,"currency":"GBP","value_usd":1925},"apc_paid":{"value":1570,"currency":"GBP","value_usd":1925},"fwci":1.2993,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.78863533,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"22","issue":"1","first_page":"72","last_page":"72"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.5213000178337097,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.5213000178337097,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.28119999170303345,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.052000001072883606,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.651585042476654},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6026661992073059},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.582423985004425},{"id":"https://openalex.org/keywords/pituitary-adenoma","display_name":"Pituitary adenoma","score":0.5593248605728149},{"id":"https://openalex.org/keywords/conditional-random-field","display_name":"Conditional random field","score":0.5100005865097046},{"id":"https://openalex.org/keywords/medical-record","display_name":"Medical record","score":0.48421287536621094},{"id":"https://openalex.org/keywords/snomed-ct","display_name":"SNOMED CT","score":0.45690667629241943},{"id":"https://openalex.org/keywords/health-informatics","display_name":"Health informatics","score":0.4257686734199524},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.35885733366012573},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3141900897026062},{"id":"https://openalex.org/keywords/adenoma","display_name":"Adenoma","score":0.22418397665023804},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.18057706952095032},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.17622965574264526},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.16697150468826294}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.651585042476654},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6026661992073059},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.582423985004425},{"id":"https://openalex.org/C2779318953","wikidata":"https://www.wikidata.org/wiki/Q864296","display_name":"Pituitary adenoma","level":3,"score":0.5593248605728149},{"id":"https://openalex.org/C152565575","wikidata":"https://www.wikidata.org/wiki/Q1124538","display_name":"Conditional random field","level":2,"score":0.5100005865097046},{"id":"https://openalex.org/C195910791","wikidata":"https://www.wikidata.org/wiki/Q1324077","display_name":"Medical record","level":2,"score":0.48421287536621094},{"id":"https://openalex.org/C206497026","wikidata":"https://www.wikidata.org/wiki/Q1753883","display_name":"SNOMED CT","level":3,"score":0.45690667629241943},{"id":"https://openalex.org/C145642194","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health informatics","level":3,"score":0.4257686734199524},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.35885733366012573},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3141900897026062},{"id":"https://openalex.org/C2777428134","wikidata":"https://www.wikidata.org/wiki/Q272741","display_name":"Adenoma","level":2,"score":0.22418397665023804},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.18057706952095032},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.17622965574264526},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.16697150468826294},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.0},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007802","descriptor_name":"Language","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010911","descriptor_name":"Pituitary Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D010911","descriptor_name":"Pituitary Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D010911","descriptor_name":"Pituitary Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12911-022-01810-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-022-01810-z","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-022-01810-z","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},{"id":"pmid:35321705","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35321705","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC medical informatics and decision making","raw_type":null},{"id":"pmh:oai:doaj.org/article:e63155918cd947649421785ba596ff89","is_oa":false,"landing_page_url":"https://doaj.org/article/e63155918cd947649421785ba596ff89","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Informatics and Decision Making, Vol 22, Iss 1, Pp 1-14 (2022)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8941801","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8941801","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Med Inform Decis Mak","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12911-022-01810-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-022-01810-z","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-022-01810-z","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4506047148","display_name":null,"funder_award_id":"2017-I2M-3-014","funder_id":"https://openalex.org/F4320336738","funder_display_name":"Chinese Academy of Medical Sciences Initiative for Innovative Medicine"},{"id":"https://openalex.org/G7247199040","display_name":null,"funder_award_id":"2016YFC0901705","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null},{"id":"https://openalex.org/F4320336738","display_name":"Chinese Academy of Medical Sciences Initiative for Innovative Medicine","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4220716821.pdf","grobid_xml":"https://content.openalex.org/works/W4220716821.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W1530507664","https://openalex.org/W2104752900","https://openalex.org/W2109206523","https://openalex.org/W2114668172","https://openalex.org/W2125093925","https://openalex.org/W2128305882","https://openalex.org/W2141766660","https://openalex.org/W2898607795","https://openalex.org/W2908880646","https://openalex.org/W2912971066","https://openalex.org/W2935513991","https://openalex.org/W2942217618","https://openalex.org/W2942409811","https://openalex.org/W2961904766","https://openalex.org/W2962904552","https://openalex.org/W2966351171","https://openalex.org/W2969705914","https://openalex.org/W2978511610","https://openalex.org/W2980839612","https://openalex.org/W2981443541","https://openalex.org/W2996219887","https://openalex.org/W3007330368","https://openalex.org/W3017117251","https://openalex.org/W3041714243","https://openalex.org/W3102251128","https://openalex.org/W3123360304","https://openalex.org/W6702248584"],"related_works":["https://openalex.org/W2039735462","https://openalex.org/W2951665393","https://openalex.org/W4297803142","https://openalex.org/W2770499767","https://openalex.org/W2295806952","https://openalex.org/W2293521960","https://openalex.org/W172101468","https://openalex.org/W131864321","https://openalex.org/W2497538197","https://openalex.org/W2206453360"],"abstract_inverted_index":{"OBJECTIVE:":[0],"Pituitary":[1],"adenomas":[2,39,85,101,190,293,407],"are":[3],"the":[4,20,57,193,209,215,222,232,236,240,253,263,304,312,350,415,434],"most":[5],"common":[6],"type":[7,360,381],"of":[8,37,56,105,113,116,135,203,211,255,291,309,317,355,376,393,424],"pituitary":[9,38,84,100,137,189,292,406],"disorders,":[10],"which":[11,121],"usually":[12],"occur":[13],"in":[14,32,94,109,327,340,385,448,451],"young":[15],"adults":[16],"and":[17,26,44,77,132,154,184,208,221,239,246,266,288,311,334,345,358,365,379],"often":[18],"affect":[19],"patient's":[21],"physical":[22],"development,":[23],"labor":[24],"capacity":[25],"fertility.":[27],"Clinical":[28],"free":[29],"texts":[30,115],"noted":[31],"electronic":[33],"medical":[34,128,454],"records":[35,118],"(EMRs)":[36],"patients":[40],"contain":[41],"abundant":[42],"diagnosis":[43],"treatment":[45,103],"information.":[46],"However,":[47],"this":[48,95,397],"information":[49,61,449],"has":[50,303],"not":[51],"been":[52],"well":[53,348],"utilized":[54],"because":[55],"challenge":[58],"to":[59,69,72,165,191,213,251,273,299,433],"extract":[60,79,166,275,421],"from":[62,86,98,124,158,169,294,439],"unstructured":[63],"clinical":[64,75,80,91,117,167,276,425,435],"texts.":[65,455],"This":[66,430],"study":[67,96,431],"aims":[68],"enable":[70],"machines":[71],"intelligently":[73],"process":[74],"information,":[76],"automatically":[78,274],"named":[81,277,436],"entity":[82,330,343,387,402,437],"for":[83,188,235,353,405],"Chinese":[87,171,295,410,440,453],"EMRs.":[88,296,411,442],"METHODS:":[89],"The":[90,140,371,443],"corpus":[92],"used":[93,164,229,250],"was":[97,177],"one":[99],"neurosurgery":[102],"center":[104],"a":[106,170,185],"3A":[107],"hospital":[108],"China.":[110],"Four":[111],"types":[112,423],"fine-grained":[114],"were":[119,163,228,249,271],"selected,":[120],"included":[122],"notes":[123],"present":[125],"illness,":[126],"past":[127],"history,":[129],"case":[130],"characteristics":[131],"family":[133,284],"history":[134],"500":[136],"adenoma":[138],"inpatients.":[139],"dictionary-based":[141,194],"matching,":[142],"conditional":[143],"random":[144],"fields":[145],"(CRF),":[146],"bidirectional":[147,155],"long":[148],"short-term":[149],"memory":[150],"with":[151,160,362,374,389,427],"CRF":[152,351,372],"(BiLSTM-CRF),":[153],"encoder":[156],"representations":[157],"transformers":[159],"BiLSTM-CRF":[161,237,337],"(BERT-BiLSTM-CRF)":[162],"entities":[168,426],"EMRs":[172],"corpus.":[173],"A":[174],"comprehensive":[175],"dictionary":[176,187],"constructed":[178],"based":[179,408],"on":[180,409],"open":[181],"source":[182],"vocabularies":[183],"domain":[186],"conduct":[192],"matching":[195],"method.":[196],"We":[197],"selected":[198],"features":[199,234,382],"such":[200],"as":[201,231,347,349],"part":[202,354,375],"speech,":[204,356,377],"radical,":[205],"document":[206,359,380],"type,":[207],"position":[210],"characters":[212],"train":[214],"CRF-based":[216],"model.":[217,242],"Random":[218],"character":[219,223],"embeddings":[220,224],"pretrained":[225],"by":[226],"BERT":[227],"respectively":[230],"input":[233],"model":[238,352,373],"BERT-BiLSTM-CRF":[241,302,324],"Both":[243],"strict":[244,306,364],"metric":[245,248],"relaxed":[247,314,366,390],"evaluate":[252],"performance":[254],"these":[256],"methods.":[257],"RESULTS:":[258],"Experimental":[259],"results":[260],"demonstrated":[261],"that":[262,323,414],"deep":[264,416],"learning":[265,269,417],"other":[267,452],"machine":[268],"methods":[270,404,418],"able":[272],"entities,":[278],"including":[279],"symptoms,":[280],"body":[281],"regions,":[282],"diseases,":[283],"histories,":[285],"surgeries,":[286],"medications,":[287],"disease":[289,335,341],"courses":[290],"With":[297],"regard":[298],"overall":[300],"performance,":[301],"highest":[305,313],"F1":[307,315,367,391],"value":[308,316,368,392],"91.27%":[310],"95.57%":[318],"respectively.":[319],"Additional":[320],"evaluations":[321],"showed":[322],"performed":[325,338,346,383],"best":[326,339,384],"almost":[328],"all":[329],"recognition":[331,388,403],"except":[332],"surgery":[333,386],"course.":[336],"course":[342],"recognition,":[344],"radical":[357,378],"features,":[361],"both":[363],"reaching":[369],"96.48%.":[370],"95.29%.":[394],"CONCLUSIONS:":[395],"In":[396],"study,":[398],"we":[399],"conducted":[400],"four":[401],"It":[412],"demonstrates":[413],"can":[419],"effectively":[420],"various":[422],"satisfying":[428],"performance.":[429],"contributed":[432],"extraction":[438,450],"neurosurgical":[441],"findings":[444],"could":[445],"also":[446],"assist":[447]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
