{"id":"https://openalex.org/W3111226055","doi":"https://doi.org/10.1186/s12911-020-01342-4","title":"Quality assurance and enrichment of biological and biomedical ontologies and terminologies","display_name":"Quality assurance and enrichment of biological and biomedical ontologies and terminologies","publication_year":2020,"publication_date":"2020-12-01","ids":{"openalex":"https://openalex.org/W3111226055","doi":"https://doi.org/10.1186/s12911-020-01342-4","mag":"3111226055","pmid":"https://pubmed.ncbi.nlm.nih.gov/33319696"},"language":"en","primary_location":{"id":"doi:10.1186/s12911-020-01342-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-020-01342-4","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-020-01342-4","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-020-01342-4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103063911","display_name":"Ankur Agrawal","orcid":"https://orcid.org/0000-0002-4389-5911"},"institutions":[{"id":"https://openalex.org/I55707380","display_name":"Manhattan College","ror":"https://ror.org/02xhnzg94","country_code":"US","type":"education","lineage":["https://openalex.org/I55707380"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ankur Agrawal","raw_affiliation_strings":["Department of Computer Science, Manhattan College, New York, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Manhattan College, New York, USA","institution_ids":["https://openalex.org/I55707380"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5049834185","display_name":"Licong Cui","orcid":"https://orcid.org/0000-0001-5549-8780"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Licong Cui","raw_affiliation_strings":["School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA. licong.cui@uth.tmc.edu","School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA. licong.cui@uth.tmc.edu","institution_ids":[]},{"raw_affiliation_string":"School of Biomedical Informatics, University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5049834185"],"corresponding_institution_ids":["https://openalex.org/I919571938"],"apc_list":{"value":1570,"currency":"GBP","value_usd":1925},"apc_paid":{"value":1570,"currency":"GBP","value_usd":1925},"fwci":0.2504,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.55263645,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"20","issue":"S10","first_page":"301","last_page":"301"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12881","display_name":"linguistics and terminology studies","score":0.9404000043869019,"subfield":{"id":"https://openalex.org/subfields/1203","display_name":"Language and Linguistics"},"field":{"id":"https://openalex.org/fields/12","display_name":"Arts and Humanities"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/snomed-ct","display_name":"SNOMED CT","score":0.835324764251709},{"id":"https://openalex.org/keywords/terminology","display_name":"Terminology","score":0.6710833311080933},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6212723255157471},{"id":"https://openalex.org/keywords/standardization","display_name":"Standardization","score":0.5719001293182373},{"id":"https://openalex.org/keywords/systematized-nomenclature-of-medicine","display_name":"Systematized Nomenclature of Medicine","score":0.5174337029457092},{"id":"https://openalex.org/keywords/quality-assurance","display_name":"Quality assurance","score":0.5155584812164307},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.5141034722328186},{"id":"https://openalex.org/keywords/open-biomedical-ontologies","display_name":"Open Biomedical Ontologies","score":0.5099443197250366},{"id":"https://openalex.org/keywords/health-informatics","display_name":"Health informatics","score":0.507895290851593},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5072850584983826},{"id":"https://openalex.org/keywords/semantic-interoperability","display_name":"Semantic interoperability","score":0.4759347438812256},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.45201948285102844},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.4336675703525543},{"id":"https://openalex.org/keywords/controlled-vocabulary","display_name":"Controlled vocabulary","score":0.4162737727165222},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.40167155861854553},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.38466835021972656},{"id":"https://openalex.org/keywords/health-care","display_name":"Health care","score":0.3412173390388489},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.3366885781288147},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.33556240797042847},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2041473686695099},{"id":"https://openalex.org/keywords/upper-ontology","display_name":"Upper ontology","score":0.12363305687904358},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.10483777523040771}],"concepts":[{"id":"https://openalex.org/C206497026","wikidata":"https://www.wikidata.org/wiki/Q1753883","display_name":"SNOMED CT","level":3,"score":0.835324764251709},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.6710833311080933},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6212723255157471},{"id":"https://openalex.org/C188087704","wikidata":"https://www.wikidata.org/wiki/Q369577","display_name":"Standardization","level":2,"score":0.5719001293182373},{"id":"https://openalex.org/C44681071","wikidata":"https://www.wikidata.org/wiki/Q4048820","display_name":"Systematized Nomenclature of Medicine","level":4,"score":0.5174337029457092},{"id":"https://openalex.org/C106436119","wikidata":"https://www.wikidata.org/wiki/Q836575","display_name":"Quality assurance","level":3,"score":0.5155584812164307},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.5141034722328186},{"id":"https://openalex.org/C137982476","wikidata":"https://www.wikidata.org/wiki/Q7072326","display_name":"Open Biomedical Ontologies","level":5,"score":0.5099443197250366},{"id":"https://openalex.org/C145642194","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health informatics","level":3,"score":0.507895290851593},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5072850584983826},{"id":"https://openalex.org/C192800085","wikidata":"https://www.wikidata.org/wiki/Q5258530","display_name":"Semantic interoperability","level":3,"score":0.4759347438812256},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.45201948285102844},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.4336675703525543},{"id":"https://openalex.org/C110615152","wikidata":"https://www.wikidata.org/wiki/Q1469824","display_name":"Controlled vocabulary","level":2,"score":0.4162737727165222},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.40167155861854553},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.38466835021972656},{"id":"https://openalex.org/C160735492","wikidata":"https://www.wikidata.org/wiki/Q31207","display_name":"Health care","level":2,"score":0.3412173390388489},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.3366885781288147},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.33556240797042847},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2041473686695099},{"id":"https://openalex.org/C78726541","wikidata":"https://www.wikidata.org/wiki/Q3882785","display_name":"Upper ontology","level":3,"score":0.12363305687904358},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.10483777523040771},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C50522688","wikidata":"https://www.wikidata.org/wiki/Q189833","display_name":"Economic growth","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C50971890","wikidata":"https://www.wikidata.org/wiki/Q7635093","display_name":"Suggested Upper Merged Ontology","level":4,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C2778618615","wikidata":"https://www.wikidata.org/wiki/Q4008393","display_name":"External quality assessment","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039061","descriptor_name":"Systematized Nomenclature of Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039061","descriptor_name":"Systematized Nomenclature of Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039061","descriptor_name":"Systematized Nomenclature of Medicine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12911-020-01342-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-020-01342-4","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-020-01342-4","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},{"id":"pmid:33319696","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33319696","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC medical informatics and decision making","raw_type":null},{"id":"pmh:oai:doaj.org/article:8aca0c2b4bd440069d4655167ffac80f","is_oa":true,"landing_page_url":"https://doaj.org/article/8aca0c2b4bd440069d4655167ffac80f","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Informatics and Decision Making, Vol 20, Iss S10, Pp 1-4 (2020)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7737253","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7737253","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Med Inform Decis Mak","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12911-020-01342-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-020-01342-4","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-020-01342-4","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3111226055.pdf","grobid_xml":"https://content.openalex.org/works/W3111226055.grobid-xml"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W1974896839","https://openalex.org/W2078161054","https://openalex.org/W2087779040","https://openalex.org/W2144103767","https://openalex.org/W2145882012","https://openalex.org/W2156997379","https://openalex.org/W2404369708","https://openalex.org/W2540149843","https://openalex.org/W2609436323","https://openalex.org/W2791800558","https://openalex.org/W2950595506","https://openalex.org/W3048364465","https://openalex.org/W3110937919","https://openalex.org/W3111550798","https://openalex.org/W3111613353","https://openalex.org/W3111873170","https://openalex.org/W3112027039","https://openalex.org/W3112368755","https://openalex.org/W3112515915","https://openalex.org/W3113106428","https://openalex.org/W3113186412"],"related_works":["https://openalex.org/W1573264052","https://openalex.org/W3040449879","https://openalex.org/W2287719286","https://openalex.org/W3158686468","https://openalex.org/W2184314632","https://openalex.org/W1563011099","https://openalex.org/W2912930644","https://openalex.org/W2264448939","https://openalex.org/W2010248145","https://openalex.org/W4307383821"],"abstract_inverted_index":{"Biological":[0],"and":[1,4,10,21,31,33,40,46,50,57,78,82,85,112],"biomedical":[2,83],"ontologies":[3,30,56,84],"terminologies":[5,32],"are":[6],"used":[7],"to":[8,15,22],"organize":[9],"store":[11],"various":[12],"domain-specific":[13],"knowledge":[14],"provide":[16,63],"standardization":[17],"of":[18,28,54,67,80,92,108],"terminology":[19],"usage":[20],"improve":[23],"interoperability.":[24],"The":[25,87],"growing":[26],"number":[27],"such":[29],"their":[34],"increasing":[35],"adoption":[36],"in":[37,71],"clinical,":[38],"research":[39],"healthcare":[41],"settings":[42],"call":[43],"for":[44,75],"effective":[45],"efficient":[47],"quality":[48,76],"assurance":[49,77],"semantic":[51],"enrichment":[52,79],"techniques":[53],"these":[55],"terminologies.":[58,86],"In":[59],"this":[60,72],"editorial,":[61],"we":[62],"an":[64],"introductory":[65],"summary":[66],"nine":[68],"articles":[69,88],"included":[70],"supplement":[73],"issue":[74],"biological":[81],"cover":[89],"a":[90],"range":[91],"standards":[93],"including":[94],"SNOMED":[95],"CT,":[96],"National":[97],"Cancer":[98,110],"Institute":[99],"Thesaurus,":[100],"Unified":[101],"Medical":[102],"Language":[103],"System,":[104],"North":[105],"American":[106],"Association":[107],"Central":[109],"Registries":[111],"OBO":[113],"Foundry":[114],"Ontologies.":[115]},"counts_by_year":[{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
