{"id":"https://openalex.org/W3082325268","doi":"https://doi.org/10.1186/s12911-020-01227-6","title":"Identification of most influential co-occurring gene suites for gastrointestinal cancer using biomedical literature mining and graph-based influence maximization","display_name":"Identification of most influential co-occurring gene suites for gastrointestinal cancer using biomedical literature mining and graph-based influence maximization","publication_year":2020,"publication_date":"2020-09-03","ids":{"openalex":"https://openalex.org/W3082325268","doi":"https://doi.org/10.1186/s12911-020-01227-6","mag":"3082325268","pmid":"https://pubmed.ncbi.nlm.nih.gov/32883271"},"language":"en","primary_location":{"id":"doi:10.1186/s12911-020-01227-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-020-01227-6","pdf_url":"https://link.springer.com/content/pdf/10.1186/s12911-020-01227-6.pdf","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://link.springer.com/content/pdf/10.1186/s12911-020-01227-6.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5002095253","display_name":"Charles C.N. Wang","orcid":"https://orcid.org/0000-0002-7305-3061"},"institutions":[{"id":"https://openalex.org/I143578492","display_name":"Asia University","ror":"https://ror.org/038a1tp19","country_code":"TW","type":"education","lineage":["https://openalex.org/I143578492"]},{"id":"https://openalex.org/I4210164862","display_name":"Artificial Intelligence in Medicine (Canada)","ror":"https://ror.org/05p590m36","country_code":"CA","type":"company","lineage":["https://openalex.org/I4210164862"]}],"countries":["CA","TW"],"is_corresponding":false,"raw_author_name":"Charles C. N. Wang","raw_affiliation_strings":["Center for Artificial Intelligence in Precision Medicine, UAsia University, Taichung, Taiwan","Department of Bioinformatics and Medical Engineering, Asia University, Taichung, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Artificial Intelligence in Precision Medicine, UAsia University, Taichung, Taiwan","institution_ids":["https://openalex.org/I4210164862"]},{"raw_affiliation_string":"Department of Bioinformatics and Medical Engineering, Asia University, Taichung, Taiwan","institution_ids":["https://openalex.org/I143578492"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005422354","display_name":"Jennifer Jin","orcid":"https://orcid.org/0000-0002-5070-591X"},"institutions":[{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jennifer Jin","raw_affiliation_strings":["Department of EECS and BME, University of California, Irvine, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of EECS and BME, University of California, Irvine, USA","institution_ids":["https://openalex.org/I204250578"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066449849","display_name":"Jan\u2010Gowth Chang","orcid":"https://orcid.org/0000-0003-0375-1427"},"institutions":[{"id":"https://openalex.org/I184693016","display_name":"China Medical University","ror":"https://ror.org/00v408z34","country_code":"TW","type":"education","lineage":["https://openalex.org/I184693016"]},{"id":"https://openalex.org/I4210126829","display_name":"China Medical University Hospital","ror":"https://ror.org/0368s4g32","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I4210126829"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Jan-Gowth Chang","raw_affiliation_strings":["Center for Precision Medicine, China Medical University Hospital, Taichung, Taiwan","Department of Laboratory Medicine, China Medical University Hospital, Taichung, Taiwan","Graduate Institute of Clinical Medical Science, School of Medicine, College of Medicine, China Medical University, Taichung, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Precision Medicine, China Medical University Hospital, Taichung, Taiwan","institution_ids":["https://openalex.org/I184693016","https://openalex.org/I4210126829"]},{"raw_affiliation_string":"Department of Laboratory Medicine, China Medical University Hospital, Taichung, Taiwan","institution_ids":["https://openalex.org/I184693016","https://openalex.org/I4210126829"]},{"raw_affiliation_string":"Graduate Institute of Clinical Medical Science, School of Medicine, College of Medicine, China Medical University, Taichung, Taiwan","institution_ids":["https://openalex.org/I184693016"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019154340","display_name":"Masahiro Hayakawa","orcid":"https://orcid.org/0000-0001-5217-3219"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Masahiro Hayakawa","raw_affiliation_strings":["NEC Solution Innovators, Koto-ku, Tokyo, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"NEC Solution Innovators, Koto-ku, Tokyo, Japan","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113586524","display_name":"Atsushi Kitazawa","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Atsushi Kitazawa","raw_affiliation_strings":["NEC Solution Innovators, Koto-ku, Tokyo, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"NEC Solution Innovators, Koto-ku, Tokyo, Japan","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018669587","display_name":"Jeffrey J. P. Tsai","orcid":"https://orcid.org/0000-0003-0473-5170"},"institutions":[{"id":"https://openalex.org/I143578492","display_name":"Asia University","ror":"https://ror.org/038a1tp19","country_code":"TW","type":"education","lineage":["https://openalex.org/I143578492"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Jeffrey J. P. Tsai","raw_affiliation_strings":["Department of Bioinformatics and Medical Engineering, Asia University, Taichung, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Medical Engineering, Asia University, Taichung, Taiwan","institution_ids":["https://openalex.org/I143578492"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076927567","display_name":"Phillip C.\u2010Y. Sheu","orcid":"https://orcid.org/0000-0003-2036-850X"},"institutions":[{"id":"https://openalex.org/I204250578","display_name":"University of California, Irvine","ror":"https://ror.org/04gyf1771","country_code":"US","type":"education","lineage":["https://openalex.org/I204250578"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Phillip C.-Y. Sheu","raw_affiliation_strings":["Department of EECS and BME, University of California, Irvine, USA. psheu@uci.edu","Department of EECS and BME, University of California, Irvine, USA"],"raw_orcid":"https://orcid.org/0000-0003-2036-850X","affiliations":[{"raw_affiliation_string":"Department of EECS and BME, University of California, Irvine, USA. psheu@uci.edu","institution_ids":["https://openalex.org/I204250578"]},{"raw_affiliation_string":"Department of EECS and BME, University of California, Irvine, USA","institution_ids":["https://openalex.org/I204250578"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5076927567"],"corresponding_institution_ids":["https://openalex.org/I204250578"],"apc_list":{"value":2690,"currency":"USD","value_usd":2690},"apc_paid":{"value":2690,"currency":"USD","value_usd":2690},"fwci":0.1491,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.45313784,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"20","issue":"1","first_page":"208","last_page":"208"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.5899999737739563,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.5899999737739563,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.19930000603199005,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11273","display_name":"Advanced Graph Neural Networks","score":0.013399999588727951,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5899560451507568},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.5165575742721558},{"id":"https://openalex.org/keywords/gastrointestinal-cancer","display_name":"Gastrointestinal cancer","score":0.4654237926006317},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.44866523146629333},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.44570600986480713},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3466370105743408},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.317848801612854},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.29797184467315674},{"id":"https://openalex.org/keywords/colorectal-cancer","display_name":"Colorectal cancer","score":0.296463280916214},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23985424637794495},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.12561854720115662},{"id":"https://openalex.org/keywords/internal-medicine","display_name":"Internal medicine","score":0.11236634850502014}],"concepts":[{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5899560451507568},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.5165575742721558},{"id":"https://openalex.org/C542804219","wikidata":"https://www.wikidata.org/wiki/Q5526839","display_name":"Gastrointestinal cancer","level":4,"score":0.4654237926006317},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.44866523146629333},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.44570600986480713},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3466370105743408},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.317848801612854},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.29797184467315674},{"id":"https://openalex.org/C526805850","wikidata":"https://www.wikidata.org/wiki/Q188874","display_name":"Colorectal cancer","level":3,"score":0.296463280916214},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23985424637794495},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.12561854720115662},{"id":"https://openalex.org/C126322002","wikidata":"https://www.wikidata.org/wiki/Q11180","display_name":"Internal medicine","level":1,"score":0.11236634850502014},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005770","descriptor_name":"Gastrointestinal Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D005770","descriptor_name":"Gastrointestinal Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D005770","descriptor_name":"Gastrointestinal Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051017","descriptor_name":"Apoptosis Regulatory Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051017","descriptor_name":"Apoptosis Regulatory Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051017","descriptor_name":"Apoptosis Regulatory Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12911-020-01227-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-020-01227-6","pdf_url":"https://link.springer.com/content/pdf/10.1186/s12911-020-01227-6.pdf","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},{"id":"pmid:32883271","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32883271","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC medical informatics and decision making","raw_type":null},{"id":"pmh:oai:doaj.org/article:343b4c817de14241a2cba689e5b26ec2","is_oa":true,"landing_page_url":"https://doaj.org/article/343b4c817de14241a2cba689e5b26ec2","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Informatics and Decision Making, Vol 20, Iss 1, Pp 1-12 (2020)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7469322","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7469322","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Med Inform Decis Mak","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12911-020-01227-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-020-01227-6","pdf_url":"https://link.springer.com/content/pdf/10.1186/s12911-020-01227-6.pdf","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.6200000047683716,"id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G1192399272","display_name":null,"funder_award_id":"MOST 106-","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G2945369289","display_name":null,"funder_award_id":"MOST 106-2632-E-468-003","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G939887807","display_name":null,"funder_award_id":"MOST 106","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"}],"funders":[{"id":"https://openalex.org/F4320322795","display_name":"Ministry of Science and Technology, Taiwan","ror":"https://ror.org/02kv4zf79"},{"id":"https://openalex.org/F4320323032","display_name":"Asia University","ror":"https://ror.org/038a1tp19"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3082325268.pdf","grobid_xml":"https://content.openalex.org/works/W3082325268.grobid-xml"},"referenced_works_count":49,"referenced_works":["https://openalex.org/W1576096421","https://openalex.org/W1629994411","https://openalex.org/W1806981800","https://openalex.org/W1994306321","https://openalex.org/W1996002274","https://openalex.org/W2032069669","https://openalex.org/W2034997563","https://openalex.org/W2037915750","https://openalex.org/W2040223842","https://openalex.org/W2050263604","https://openalex.org/W2053106866","https://openalex.org/W2059126940","https://openalex.org/W2061820396","https://openalex.org/W2066253321","https://openalex.org/W2072932198","https://openalex.org/W2088883749","https://openalex.org/W2095015521","https://openalex.org/W2111776022","https://openalex.org/W2113305236","https://openalex.org/W2118582067","https://openalex.org/W2130410032","https://openalex.org/W2154139219","https://openalex.org/W2154142897","https://openalex.org/W2158217645","https://openalex.org/W2158485828","https://openalex.org/W2166474856","https://openalex.org/W2185633646","https://openalex.org/W2344996561","https://openalex.org/W2483498405","https://openalex.org/W2588765617","https://openalex.org/W2589937067","https://openalex.org/W2736626651","https://openalex.org/W2744636379","https://openalex.org/W2752433599","https://openalex.org/W2784023565","https://openalex.org/W2785356965","https://openalex.org/W2786693834","https://openalex.org/W2800535933","https://openalex.org/W2804425727","https://openalex.org/W2885708123","https://openalex.org/W2911489562","https://openalex.org/W2915895751","https://openalex.org/W2946690328","https://openalex.org/W2949075031","https://openalex.org/W2959674799","https://openalex.org/W2962902328","https://openalex.org/W2997394673","https://openalex.org/W3020930839","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W3037187668","https://openalex.org/W4234772502","https://openalex.org/W2380685755","https://openalex.org/W2252100032","https://openalex.org/W2963436428","https://openalex.org/W2734796617","https://openalex.org/W3083218341","https://openalex.org/W2102405864","https://openalex.org/W3034087822","https://openalex.org/W2477982797"],"abstract_inverted_index":{"BACKGROUND:":[0],"Gastrointestinal":[1],"(GI)":[2],"cancer":[3],"including":[4],"colorectal":[5],"cancer,":[6,8,10],"gastric":[7],"pancreatic":[9],"etc.,":[11],"are":[12,81,98],"among":[13],"the":[14,75,82,99,149,155,183],"most":[15,83,100,184],"frequent":[16],"malignancies":[17],"diagnosed":[18],"annually":[19],"and":[20,59,69,141,143,170,176],"represent":[21],"a":[22,67,174,189],"major":[23],"public":[24],"health":[25],"problem":[26],"worldwide.":[27],"METHODS:":[28],"This":[29],"paper":[30],"reports":[31],"an":[32,87],"aided":[33],"curation":[34,45],"pipeline":[35,46,162],"to":[36,50,65,167,172,181,192],"identify":[37,51,168],"potential":[38],"influential":[39,84,101,185],"genes":[40,79,96,187],"for":[41,196],"gastrointestinal":[42,158],"cancer.":[43,159],"The":[44,57,92],"integrates":[47],"biomedical":[48],"literature":[49],"named":[52],"entities":[53,58],"by":[54],"Bi-LSTM-CNN-CRF":[55],"methods.":[56],"their":[60],"associations":[61],"can":[62,73],"be":[63],"used":[64],"construct":[66,173],"graph,":[68],"from":[70],"which":[71],"we":[72,103,147],"compute":[74],"sets":[76,93],"of":[77,94,157],"co-occurring":[78,95,186],"that":[80,97,102,163],"based":[85],"on":[86],"influence":[88,179],"maximization":[89,180],"algorithm.":[90],"RESULTS:":[91],"discover":[104,182],"include":[105],"RARA":[106,117],"-":[107,110,113,115,118,120,123,125,128,130,133,135,137],"CRBP1,":[108,116,121],"CASP3":[109,114,119],"BCL2,":[111],"BCL2":[112],"FOXJ1":[122,127,132],"RASSF3":[124],"ESR1,":[126,131],"RASSF1A":[129,134],"TNFAIP8":[136],"ESR1.":[138],"With":[139],"TCGA":[140],"functional":[142],"pathway":[144],"enrichment":[145],"analysis,":[146],"prove":[148],"proposed":[150],"approach":[151],"works":[152],"well":[153],"in":[154],"context":[156],"CONCLUSIONS:":[160],"Our":[161],"uses":[164,177],"text":[165],"mining":[166],"objects":[169],"relationships":[171],"graph":[175],"graph-based":[178],"presents":[188],"viable":[190],"direction":[191],"assist":[193],"knowledge":[194],"discovery":[195],"clinical":[197],"applications.":[198]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
