{"id":"https://openalex.org/W2996571299","doi":"https://doi.org/10.1186/s12911-019-0979-5","title":"Using an artificial neural network to map cancer common data elements to the biomedical research integrated domain group model in a semi-automated manner","display_name":"Using an artificial neural network to map cancer common data elements to the biomedical research integrated domain group model in a semi-automated manner","publication_year":2019,"publication_date":"2019-12-01","ids":{"openalex":"https://openalex.org/W2996571299","doi":"https://doi.org/10.1186/s12911-019-0979-5","mag":"2996571299","pmid":"https://pubmed.ncbi.nlm.nih.gov/31865899"},"language":"en","primary_location":{"id":"doi:10.1186/s12911-019-0979-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-019-0979-5","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-019-0979-5","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-019-0979-5","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5000913665","display_name":"Robinette Renner","orcid":"https://orcid.org/0009-0001-6551-1034"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robinette Renner","raw_affiliation_strings":["University of Minnesota, Minneapolis, MN, 55455, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Minnesota, Minneapolis, MN, 55455, USA","institution_ids":["https://openalex.org/I130238516"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108853916","display_name":"Shengyu Li","orcid":null},"institutions":[{"id":"https://openalex.org/I83809506","display_name":"University of South Alabama","ror":"https://ror.org/01s7b5y08","country_code":"US","type":"education","lineage":["https://openalex.org/I83809506"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shengyu Li","raw_affiliation_strings":["School of Computing, University of South Alabama, Mobile, AL, 36688, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing, University of South Alabama, Mobile, AL, 36688, USA","institution_ids":["https://openalex.org/I83809506"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102022713","display_name":"Yulong Huang","orcid":"https://orcid.org/0000-0002-6188-5178"},"institutions":[{"id":"https://openalex.org/I83809506","display_name":"University of South Alabama","ror":"https://ror.org/01s7b5y08","country_code":"US","type":"education","lineage":["https://openalex.org/I83809506"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yulong Huang","raw_affiliation_strings":["College of Allied Health Professions, University of South Alabama, Mobile, AL, 36608, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Allied Health Professions, University of South Alabama, Mobile, AL, 36608, USA","institution_ids":["https://openalex.org/I83809506"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069919367","display_name":"Ada Chaeli van der Zijp-Tan","orcid":null},"institutions":[{"id":"https://openalex.org/I83809506","display_name":"University of South Alabama","ror":"https://ror.org/01s7b5y08","country_code":"US","type":"education","lineage":["https://openalex.org/I83809506"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ada Chaeli van der Zijp-Tan","raw_affiliation_strings":["College of Allied Health Professions, University of South Alabama, Mobile, AL, 36608, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Allied Health Professions, University of South Alabama, Mobile, AL, 36608, USA","institution_ids":["https://openalex.org/I83809506"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021721710","display_name":"Shaobo Tan","orcid":null},"institutions":[{"id":"https://openalex.org/I83809506","display_name":"University of South Alabama","ror":"https://ror.org/01s7b5y08","country_code":"US","type":"education","lineage":["https://openalex.org/I83809506"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shaobo Tan","raw_affiliation_strings":["School of Computing, University of South Alabama, Mobile, AL, 36688, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing, University of South Alabama, Mobile, AL, 36688, USA","institution_ids":["https://openalex.org/I83809506"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101746855","display_name":"Dongqi Li","orcid":"https://orcid.org/0000-0002-0421-2161"},"institutions":[{"id":"https://openalex.org/I83809506","display_name":"University of South Alabama","ror":"https://ror.org/01s7b5y08","country_code":"US","type":"education","lineage":["https://openalex.org/I83809506"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dongqi Li","raw_affiliation_strings":["School of Computing, University of South Alabama, Mobile, AL, 36688, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing, University of South Alabama, Mobile, AL, 36688, USA","institution_ids":["https://openalex.org/I83809506"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017519521","display_name":"Mohan Vamsi Kasukurthi","orcid":null},"institutions":[{"id":"https://openalex.org/I83809506","display_name":"University of South Alabama","ror":"https://ror.org/01s7b5y08","country_code":"US","type":"education","lineage":["https://openalex.org/I83809506"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mohan Vamsi Kasukurthi","raw_affiliation_strings":["School of Computing, University of South Alabama, Mobile, AL, 36688, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing, University of South Alabama, Mobile, AL, 36688, USA","institution_ids":["https://openalex.org/I83809506"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005864826","display_name":"Ryan Benton","orcid":"https://orcid.org/0000-0001-9616-6221"},"institutions":[{"id":"https://openalex.org/I83809506","display_name":"University of South Alabama","ror":"https://ror.org/01s7b5y08","country_code":"US","type":"education","lineage":["https://openalex.org/I83809506"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ryan Benton","raw_affiliation_strings":["School of Computing, University of South Alabama, Mobile, AL, 36688, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computing, University of South Alabama, Mobile, AL, 36688, USA","institution_ids":["https://openalex.org/I83809506"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066027793","display_name":"Glen M. Borchert","orcid":"https://orcid.org/0000-0002-6182-7154"},"institutions":[{"id":"https://openalex.org/I83809506","display_name":"University of South Alabama","ror":"https://ror.org/01s7b5y08","country_code":"US","type":"education","lineage":["https://openalex.org/I83809506"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Glen M. Borchert","raw_affiliation_strings":["College of Medicine, University of South Alabama, Mobile, AL, 36688, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Medicine, University of South Alabama, Mobile, AL, 36688, USA","institution_ids":["https://openalex.org/I83809506"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103191466","display_name":"Jingshan Huang","orcid":"https://orcid.org/0000-0003-2408-2883"},"institutions":[{"id":"https://openalex.org/I152269853","display_name":"Qilu University of Technology","ror":"https://ror.org/04hyzq608","country_code":"CN","type":"education","lineage":["https://openalex.org/I152269853"]},{"id":"https://openalex.org/I4210142748","display_name":"Shandong Academy of Sciences","ror":"https://ror.org/04y8d6y55","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210142748"]},{"id":"https://openalex.org/I83809506","display_name":"University of South Alabama","ror":"https://ror.org/01s7b5y08","country_code":"US","type":"education","lineage":["https://openalex.org/I83809506"]}],"countries":["CN","US"],"is_corresponding":true,"raw_author_name":"Jingshan Huang","raw_affiliation_strings":["Qilu University of Technology (Shandong Academy of Science), Jinan, China. huang@southalabama.edu","School of Computing, University of South Alabama, Mobile, AL, 36688, USA. huang@southalabama.edu","Qilu University of Technology (Shandong Academy of Science), Jinan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Qilu University of Technology (Shandong Academy of Science), Jinan, China. huang@southalabama.edu","institution_ids":["https://openalex.org/I152269853","https://openalex.org/I4210142748"]},{"raw_affiliation_string":"School of Computing, University of South Alabama, Mobile, AL, 36688, USA. huang@southalabama.edu","institution_ids":["https://openalex.org/I83809506"]},{"raw_affiliation_string":"Qilu University of Technology (Shandong Academy of Science), Jinan, China","institution_ids":["https://openalex.org/I152269853"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5007963072","display_name":"Guoqian Jiang","orcid":"https://orcid.org/0000-0003-2940-0019"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I4210125099","display_name":"Mayo Clinic in Arizona","ror":"https://ror.org/03jp40720","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210125099"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Guoqian Jiang","raw_affiliation_strings":["Mayo Clinic, Rochester, MN, 55905, USA. jiang.guoqian@mayo.edu","Mayo Clinic, Rochester, MN, 55905, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mayo Clinic, Rochester, MN, 55905, USA. jiang.guoqian@mayo.edu","institution_ids":["https://openalex.org/I4210125099","https://openalex.org/I1330342723","https://openalex.org/I4210146710"]},{"raw_affiliation_string":"Mayo Clinic, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I4210125099"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5007963072","https://openalex.org/A5103191466"],"corresponding_institution_ids":["https://openalex.org/I1330342723","https://openalex.org/I152269853","https://openalex.org/I4210125099","https://openalex.org/I4210142748","https://openalex.org/I4210146710","https://openalex.org/I83809506"],"apc_list":{"value":1570,"currency":"GBP","value_usd":1925},"apc_paid":{"value":1570,"currency":"GBP","value_usd":1925},"fwci":0.1709,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.54207137,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"19","issue":"S7","first_page":"276","last_page":"276"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.24210000038146973,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.24210000038146973,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.15790000557899475,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10350","display_name":"Electronic Health Records Systems","score":0.0689999982714653,"subfield":{"id":"https://openalex.org/subfields/3605","display_name":"Health Information Management"},"field":{"id":"https://openalex.org/fields/36","display_name":"Health Professions"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7021855115890503},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5818127393722534},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.5282028317451477},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.5209075808525085},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.5158388018608093},{"id":"https://openalex.org/keywords/health-informatics","display_name":"Health informatics","score":0.4147636592388153},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3880890905857086},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.08529964089393616}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7021855115890503},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5818127393722534},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.5282028317451477},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.5209075808525085},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.5158388018608093},{"id":"https://openalex.org/C145642194","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health informatics","level":3,"score":0.4147636592388153},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3880890905857086},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.08529964089393616},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D065709","descriptor_name":"Common Data Elements","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D065709","descriptor_name":"Common Data Elements","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D065709","descriptor_name":"Common Data Elements","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12911-019-0979-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-019-0979-5","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-019-0979-5","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},{"id":"pmid:31865899","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31865899","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC medical informatics and decision making","raw_type":null},{"id":"pmh:oai:doaj.org/article:b0cae20075254985b749fafbf8d5997a","is_oa":true,"landing_page_url":"https://doaj.org/article/b0cae20075254985b749fafbf8d5997a","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Informatics and Decision Making, Vol 19, Iss S7, Pp 1-13 (2019)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:6927104","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6927104","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Med Inform Decis Mak","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12911-019-0979-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-019-0979-5","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-019-0979-5","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Partnerships for the goals","score":0.4099999964237213,"id":"https://metadata.un.org/sdg/17"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2996571299.pdf","grobid_xml":"https://content.openalex.org/works/W2996571299.grobid-xml"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W32756236","https://openalex.org/W1590030008","https://openalex.org/W1591339381","https://openalex.org/W1965078122","https://openalex.org/W2007226769","https://openalex.org/W2020694521","https://openalex.org/W2026836010","https://openalex.org/W2057475448","https://openalex.org/W2087779040","https://openalex.org/W2108489852","https://openalex.org/W2122405755","https://openalex.org/W2148985136","https://openalex.org/W2157060173","https://openalex.org/W2188685481","https://openalex.org/W2302501749","https://openalex.org/W2589963325","https://openalex.org/W2773787581","https://openalex.org/W2915037418"],"related_works":["https://openalex.org/W2124655189","https://openalex.org/W2391251536","https://openalex.org/W2362198218","https://openalex.org/W2019521278","https://openalex.org/W1984922432","https://openalex.org/W1982750869","https://openalex.org/W2003798170","https://openalex.org/W2375008505","https://openalex.org/W2086348228","https://openalex.org/W2350679292"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,254],"medical":[2],"community":[3],"uses":[4],"a":[5,46,52,100,114,141,174,184,208,220,234],"variety":[6],"of":[7,143,163,186,194,211,223,237,251,268,278,299,317],"data":[8,30,270,281],"standards":[9],"for":[10,55,89,103,228],"both":[11,327],"clinical":[12,58],"and":[13,57,96,127,158,176,227,295,301,315,345],"research":[14,59],"reporting":[15],"needs.":[16],"ISO":[17],"11179":[18],"Common":[19],"Data":[20],"Elements":[21],"(CDEs)":[22],"represent":[23],"one":[24],"such":[25],"standard":[26,34,155],"that":[27,50,265],"provides":[28,51],"robust":[29,147],"point":[31],"definitions.":[32],"Another":[33],"is":[35,45,68,85,94,271],"the":[36,62,65,76,86,91,153,160,171,181,192,249,266,275,279,283,288,297,313,342,347],"Biomedical":[37],"Research":[38],"Integrated":[39],"Domain":[40],"Group":[41],"(BRIDG)":[42],"model,":[43],"which":[44,84,191],"domain":[47,252],"analysis":[48],"model":[49,67],"contextual":[53],"framework":[54],"biomedical":[56],"data.":[60,285],"Mapping":[61],"CDEs":[63,77,119,145,200,293,323,329],"to":[64,78,117,120,149,156,190,203,239,282],"BRIDG":[66,122,150,178,188,325],"important;":[69],"in":[70,166,206,259,321],"particular,":[71],"it":[72,340],"can":[73],"facilitate":[74],"mapping":[75,246,322,343,348],"other":[79],"standards.":[80],"Unfortunately,":[81],"manual":[82],"mapping,":[83],"current":[87],"method":[88],"creating":[90],"CDE":[92,175,193],"mappings,":[93],"error-prone":[95],"time-consuming;":[97],"this":[98,110],"creates":[99],"significant":[101,258],"barrier":[102],"researchers":[104],"who":[105],"utilize":[106],"CDEs.":[107,167,337],"METHODS:":[108],"In":[109,338],"work,":[111],"we":[112,125,169],"developed":[113,131],"semi-automated":[115,245],"algorithm":[116,182],"map":[118],"likely":[121],"classes.":[123],"First,":[124],"extended":[126],"improved":[128],"our":[129,318],"previously":[130],"artificial":[132],"neural":[133],"network":[134],"(ANN)":[135],"alignment":[136],"algorithm.":[137],"We":[138,286],"then":[139],"used":[140,205],"collection":[142],"1284":[144],"with":[146,230,324],"mappings":[148],"classes":[151,189],"as":[152,332,334],"gold":[154],"train":[157],"obtain":[159],"appropriate":[161],"weights":[162,255],"six":[164,260],"attributes":[165],"Afterward,":[168],"calculated":[170],"similarity":[172,277],"between":[173],"each":[177],"class.":[179],"Finally,":[180],"produces":[183],"list":[185],"candidate":[187],"interest":[195],"may":[196],"belong.":[197],"RESULTS:":[198],"For":[199,216],"semantically":[201],"similar":[202],"those":[204,217,229,328],"training,":[207],"match":[209,221,235],"rate":[210,222,236],"over":[212],"90%":[213],"was":[214,225,241],"achieved.":[215,242],"partially":[218],"similar,":[219],"80%":[224],"obtained":[226],"drastically":[231],"different":[232],"semantics,":[233],"up":[238],"70%":[240],"DISCUSSION:":[243],"Our":[244],"process":[247],"reduces":[248,341],"burden":[250,344],"experts.":[253],"are":[256],"all":[257],"attributes.":[261],"Experimental":[262,305],"results":[263,306],"indicate":[264],"availability":[267],"training":[269,284,300],"more":[272],"important":[273],"than":[274],"semantic":[276],"testing":[280],"address":[287],"overfitting":[289],"problem":[290],"by":[291],"selecting":[292],"randomly":[294],"adjusting":[296],"ratio":[298],"verification":[302],"samples.":[303],"CONCLUSIONS:":[304],"on":[307],"real-world":[308],"use":[309],"cases":[310],"have":[311],"proven":[312],"effectiveness":[314],"efficiency":[316],"proposed":[319],"methodology":[320],"classes,":[326],"seen":[330],"before":[331],"well":[333],"new,":[335],"unseen":[336],"addition,":[339],"improves":[346],"quality.":[349]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
