{"id":"https://openalex.org/W2939903565","doi":"https://doi.org/10.1186/s12911-019-0766-3","title":"Time-sensitive clinical concept embeddings learned from large electronic health records","display_name":"Time-sensitive clinical concept embeddings learned from large electronic health records","publication_year":2019,"publication_date":"2019-04-01","ids":{"openalex":"https://openalex.org/W2939903565","doi":"https://doi.org/10.1186/s12911-019-0766-3","mag":"2939903565","pmid":"https://pubmed.ncbi.nlm.nih.gov/30961579"},"language":"en","primary_location":{"id":"doi:10.1186/s12911-019-0766-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-019-0766-3","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-019-0766-3","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-019-0766-3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101632572","display_name":"Yang Xiang","orcid":"https://orcid.org/0000-0003-1395-6805"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yang Xiang","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102836035","display_name":"Jun Xu","orcid":"https://orcid.org/0000-0002-1823-3633"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jun Xu","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011255280","display_name":"Yuqi Si","orcid":"https://orcid.org/0000-0002-8123-8947"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yuqi Si","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100765839","display_name":"Zhiheng Li","orcid":"https://orcid.org/0000-0002-3406-2141"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]},{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Zhiheng Li","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","School of Computer Science and Technology, Dalian University of Technology, Dalian, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]},{"raw_affiliation_string":"School of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070017288","display_name":"Laila Rasmy","orcid":"https://orcid.org/0000-0002-2644-4908"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Laila Rasmy","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016388137","display_name":"Yujia Zhou","orcid":"https://orcid.org/0000-0003-0889-2261"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yujia Zhou","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032400812","display_name":"Firat Tiryaki","orcid":null},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Firat Tiryaki","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100394163","display_name":"Fang Li","orcid":"https://orcid.org/0000-0001-8865-7717"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Fang Li","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091899643","display_name":"Yaoyun Zhang","orcid":"https://orcid.org/0000-0001-9220-3101"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yaoyun Zhang","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010253402","display_name":"Yonghui Wu","orcid":"https://orcid.org/0000-0002-6780-6135"},"institutions":[{"id":"https://openalex.org/I33213144","display_name":"University of Florida","ror":"https://ror.org/02y3ad647","country_code":"US","type":"education","lineage":["https://openalex.org/I33213144"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yonghui Wu","raw_affiliation_strings":["Department of Health Outcomes & Biomedical Informatics, College of Medicine, University of Florida, Gainesville, FL, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Health Outcomes & Biomedical Informatics, College of Medicine, University of Florida, Gainesville, FL, USA","institution_ids":["https://openalex.org/I33213144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055458864","display_name":"Xiaoqian Jiang","orcid":"https://orcid.org/0000-0001-9933-2205"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiaoqian Jiang","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091809743","display_name":"W. Jim Zheng","orcid":"https://orcid.org/0000-0001-7411-6047"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Wenjin Jim Zheng","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012354604","display_name":"Degui Zhi","orcid":"https://orcid.org/0000-0001-7754-1890"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Degui Zhi","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076058129","display_name":"Cui Tao","orcid":"https://orcid.org/0000-0002-4267-1924"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cui Tao","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084072550","display_name":"Hua Xu","orcid":"https://orcid.org/0000-0002-5274-4672"},"institutions":[{"id":"https://openalex.org/I4210159031","display_name":"The University of Texas Health Science Center","ror":"https://ror.org/05cwbxa29","country_code":"US","type":"education","lineage":["https://openalex.org/I4210159031"]},{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hua Xu","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA. Hua.Xu@uth.tmc.edu","School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA. Hua.Xu@uth.tmc.edu","institution_ids":["https://openalex.org/I919571938","https://openalex.org/I4210159031"]},{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center at Houston, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":15,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1570,"currency":"GBP","value_usd":1925},"apc_paid":{"value":1570,"currency":"GBP","value_usd":1925},"fwci":2.4583,"has_fulltext":true,"cited_by_count":34,"citation_normalized_percentile":{"value":0.9154715,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"19","issue":"S2","first_page":"58","last_page":"58"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9801999926567078,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.9801999926567078,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.006899999920278788,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11273","display_name":"Advanced Graph Neural Networks","score":0.0026000000070780516,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/word2vec","display_name":"Word2vec","score":0.8280566930770874},{"id":"https://openalex.org/keywords/pointwise-mutual-information","display_name":"Pointwise mutual information","score":0.7465897798538208},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7152249217033386},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.6155140399932861},{"id":"https://openalex.org/keywords/pointwise","display_name":"Pointwise","score":0.5483940839767456},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5475077629089355},{"id":"https://openalex.org/keywords/similarity-measure","display_name":"Similarity measure","score":0.5381193161010742},{"id":"https://openalex.org/keywords/health-informatics","display_name":"Health informatics","score":0.5267362594604492},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5048366189002991},{"id":"https://openalex.org/keywords/embedding","display_name":"Embedding","score":0.5033137202262878},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.48111408948898315},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.44782909750938416},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3630325198173523},{"id":"https://openalex.org/keywords/mutual-information","display_name":"Mutual information","score":0.30760395526885986},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.11914554238319397},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1097663938999176}],"concepts":[{"id":"https://openalex.org/C2776461190","wikidata":"https://www.wikidata.org/wiki/Q22673982","display_name":"Word2vec","level":3,"score":0.8280566930770874},{"id":"https://openalex.org/C7797323","wikidata":"https://www.wikidata.org/wiki/Q3798612","display_name":"Pointwise mutual information","level":3,"score":0.7465897798538208},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7152249217033386},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.6155140399932861},{"id":"https://openalex.org/C2777984123","wikidata":"https://www.wikidata.org/wiki/Q9248237","display_name":"Pointwise","level":2,"score":0.5483940839767456},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5475077629089355},{"id":"https://openalex.org/C2776517306","wikidata":"https://www.wikidata.org/wiki/Q29017317","display_name":"Similarity measure","level":2,"score":0.5381193161010742},{"id":"https://openalex.org/C145642194","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health informatics","level":3,"score":0.5267362594604492},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5048366189002991},{"id":"https://openalex.org/C41608201","wikidata":"https://www.wikidata.org/wiki/Q980509","display_name":"Embedding","level":2,"score":0.5033137202262878},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.48111408948898315},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.44782909750938416},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3630325198173523},{"id":"https://openalex.org/C152139883","wikidata":"https://www.wikidata.org/wiki/Q252973","display_name":"Mutual information","level":2,"score":0.30760395526885986},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.11914554238319397},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1097663938999176},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013997","descriptor_name":"Time Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12911-019-0766-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-019-0766-3","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-019-0766-3","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},{"id":"pmid:30961579","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30961579","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC medical informatics and decision making","raw_type":null},{"id":"pmh:oai:UFDC:AA00067325_00001","is_oa":true,"landing_page_url":"http://ufdc.ufl.edu/AA00067325/00001","pdf_url":null,"source":{"id":"https://openalex.org/S4306400471","display_name":"University of Florida Digital Collections (University of Florida)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I33213144","host_organization_name":"University of Florida","host_organization_lineage":["https://openalex.org/I33213144"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"mixed material"},{"id":"pmh:oai:doaj.org/article:f44e156eeab3417ab168dbe42a247a7d","is_oa":true,"landing_page_url":"https://doaj.org/article/f44e156eeab3417ab168dbe42a247a7d","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Informatics and Decision Making, Vol 19, Iss S2, Pp 139-148 (2019)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:6454598","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6454598","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Med Inform Decis Mak","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12911-019-0766-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-019-0766-3","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-019-0766-3","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1413019591","display_name":null,"funder_award_id":"1R01AI130460","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3575224597","display_name":null,"funder_award_id":"RP170668","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G6071359385","display_name":null,"funder_award_id":"U01TR002062","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320309480","display_name":"Nvidia","ror":"https://ror.org/03jdj4y14"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2939903565.pdf","grobid_xml":"https://content.openalex.org/works/W2939903565.grobid-xml"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W1579185617","https://openalex.org/W1615991656","https://openalex.org/W1832693441","https://openalex.org/W2060300932","https://openalex.org/W2130695501","https://openalex.org/W2132339004","https://openalex.org/W2162995595","https://openalex.org/W2163922914","https://openalex.org/W2187089797","https://openalex.org/W2250539671","https://openalex.org/W2284851926","https://openalex.org/W2493916176","https://openalex.org/W2514071032","https://openalex.org/W2515462165","https://openalex.org/W2518186251","https://openalex.org/W2584780866","https://openalex.org/W2593438634","https://openalex.org/W2808379857","https://openalex.org/W2950577311","https://openalex.org/W2963224980","https://openalex.org/W2963271116","https://openalex.org/W2963611386","https://openalex.org/W2964199361","https://openalex.org/W2997522493","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2101924850","https://openalex.org/W2188315358","https://openalex.org/W4387724891","https://openalex.org/W2137853824","https://openalex.org/W2165143551","https://openalex.org/W2530029028","https://openalex.org/W31749436","https://openalex.org/W2337819340","https://openalex.org/W4249547761","https://openalex.org/W2522414999"],"abstract_inverted_index":{"BACKGROUND:":[0],"Learning":[1],"distributional":[2],"representation":[3],"of":[4,17,38,48,116,123,198],"clinical":[5,188],"concepts":[6],"(e.g.,":[7],"diseases,":[8],"drugs,":[9],"and":[10,69,96,108,149],"labs)":[11],"is":[12],"an":[13,109],"important":[14,185],"research":[15],"area":[16],"deep":[18],"learning":[19,61],"in":[20,120,186],"the":[21,35,114,121,145,150,158,163,167],"medical":[22],"domain.":[23],"However,":[24],"many":[25],"existing":[26],"relevant":[27],"methods":[28],"do":[29],"not":[30],"consider":[31,72],"temporal":[32],"dependencies":[33],"along":[34],"longitudinal":[36],"sequence":[37],"a":[39,80,176,196],"patient's":[40],"records,":[41],"which":[42],"may":[43],"lead":[44],"to":[45,71,92,112],"incorrect":[46],"selection":[47],"contexts.":[49],"METHODS:":[50],"To":[51],"address":[52],"this":[53],"issue,":[54],"we":[55],"extended":[56],"three":[57],"popular":[58],"concept":[59,94,105,118,146,189],"embedding":[60],"methods:":[62],"word2vec,":[63],"positive":[64],"pointwise":[65],"mutual":[66],"information":[67,135],"(PPMI)":[68],"FastText,":[70],"time-sensitive":[73],"information.":[74],"We":[75,191],"then":[76],"trained":[77],"them":[78,98],"on":[79,104,144],"large":[81],"electronic":[82],"health":[83],"records":[84],"(EHR)":[85],"database":[86],"containing":[87],"about":[88],"50":[89],"million":[90],"patients":[91],"generate":[93],"embeddings":[95,119,132,174],"evaluated":[97],"for":[99],"both":[100],"intrinsic":[101],"evaluations":[102],"focusing":[103],"similarity":[106,147],"measure":[107,148],"extrinsic":[110],"evaluation":[111],"assess":[113],"use":[115],"generated":[117],"task":[122],"predicting":[124],"disease":[125],"onset.":[126],"RESULTS:":[127],"Our":[128],"experiments":[129],"show":[130],"that":[131],"learned":[133],"from":[134],"within":[136],"one":[137],"visit":[138],"(time":[139],"window":[140],"zero)":[141],"improve":[142],"performance":[143,156],"FastText":[151],"algorithm":[152],"usually":[153],"had":[154],"better":[155],"than":[157],"other":[159],"two":[160],"algorithms.":[161],"For":[162],"predictive":[164],"modeling":[165],"task,":[166],"optimal":[168],"result":[169],"was":[170],"achieved":[171],"by":[172],"word2vec":[173],"with":[175],"30-day":[177],"sliding":[178],"window.":[179],"CONCLUSIONS:":[180],"Considering":[181],"time":[182],"constraints":[183],"are":[184],"training":[187],"embeddings.":[190],"expect":[192],"they":[193],"can":[194],"benefit":[195],"series":[197],"downstream":[199],"applications.":[200]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
