{"id":"https://openalex.org/W2927032858","doi":"https://doi.org/10.1186/s12911-018-0723-6","title":"A clinical text classification paradigm using weak supervision and deep representation","display_name":"A clinical text classification paradigm using weak supervision and deep representation","publication_year":2019,"publication_date":"2019-01-07","ids":{"openalex":"https://openalex.org/W2927032858","doi":"https://doi.org/10.1186/s12911-018-0723-6","mag":"2927032858","pmid":"https://pubmed.ncbi.nlm.nih.gov/30616584"},"language":"en","primary_location":{"id":"doi:10.1186/s12911-018-0723-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-018-0723-6","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-018-0723-6","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-018-0723-6","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5080116611","display_name":"Yanshan Wang","orcid":"https://orcid.org/0000-0003-4433-7839"},"institutions":[{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Yanshan Wang","raw_affiliation_strings":["Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA. wang.yanshan@mayo.edu","Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA"],"raw_orcid":"https://orcid.org/0000-0003-4433-7839","affiliations":[{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA. wang.yanshan@mayo.edu","institution_ids":["https://openalex.org/I4210146710"]},{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I4210146710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063986559","display_name":"Sunghwan Sohn","orcid":"https://orcid.org/0000-0001-8256-2602"},"institutions":[{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sunghwan Sohn","raw_affiliation_strings":["Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I4210146710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100321835","display_name":"Sijia Liu","orcid":"https://orcid.org/0000-0001-9763-1164"},"institutions":[{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sijia Liu","raw_affiliation_strings":["Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I4210146710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087033178","display_name":"Feichen Shen","orcid":"https://orcid.org/0000-0002-7803-2331"},"institutions":[{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Feichen Shen","raw_affiliation_strings":["Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I4210146710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100406711","display_name":"Liwei Wang","orcid":"https://orcid.org/0000-0001-9970-8604"},"institutions":[{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Liwei Wang","raw_affiliation_strings":["Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I4210146710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038589760","display_name":"Elizabeth J. Atkinson","orcid":"https://orcid.org/0000-0002-1191-3775"},"institutions":[{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Elizabeth J. Atkinson","raw_affiliation_strings":["Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I4210146710"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013873772","display_name":"Shreyasee Amin","orcid":"https://orcid.org/0000-0002-8940-2449"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I2802423016","display_name":"WinnMed","ror":"https://ror.org/02s47w807","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2802423016"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shreyasee Amin","raw_affiliation_strings":["Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA","Division of Rheumatology, Department of Medicine, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Epidemiology, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I4210146710","https://openalex.org/I1330342723"]},{"raw_affiliation_string":"Division of Rheumatology, Department of Medicine, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I1330342723","https://openalex.org/I2802423016"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101585391","display_name":"Hongfang Liu","orcid":"https://orcid.org/0000-0003-2570-3741"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]},{"id":"https://openalex.org/I4210146710","display_name":"Mayo Clinic in Florida","ror":"https://ror.org/03zzw1w08","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1330342723","https://openalex.org/I4210146710"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hongfang Liu","raw_affiliation_strings":["Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA. liu.hongfang@mayo.edu","Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA. liu.hongfang@mayo.edu","institution_ids":["https://openalex.org/I4210146710","https://openalex.org/I1330342723"]},{"raw_affiliation_string":"Division of Biomedical Statistics and Informatics, Department of Health Sciences Research, Mayo Clinic, 200 1st ST SW, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I4210146710"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5080116611"],"corresponding_institution_ids":["https://openalex.org/I4210146710"],"apc_list":{"value":1570,"currency":"GBP","value_usd":1925},"apc_paid":{"value":1570,"currency":"GBP","value_usd":1925},"fwci":29.522,"has_fulltext":true,"cited_by_count":421,"citation_normalized_percentile":{"value":0.99721522,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"19","issue":"1","first_page":"1","last_page":"1"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.3255999982357025,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.3255999982357025,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.11050000041723251,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11636","display_name":"Artificial Intelligence in Healthcare and Education","score":0.10480000078678131,"subfield":{"id":"https://openalex.org/subfields/2718","display_name":"Health Informatics"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/health-informatics","display_name":"Health informatics","score":0.7662054896354675},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5871490240097046},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.5358774662017822},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.42332252860069275},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4131016135215759},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.410084068775177},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.24778208136558533},{"id":"https://openalex.org/keywords/nursing","display_name":"Nursing","score":0.19273218512535095},{"id":"https://openalex.org/keywords/public-health","display_name":"Public health","score":0.14180392026901245},{"id":"https://openalex.org/keywords/political-science","display_name":"Political science","score":0.09122809767723083}],"concepts":[{"id":"https://openalex.org/C145642194","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health informatics","level":3,"score":0.7662054896354675},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5871490240097046},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.5358774662017822},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.42332252860069275},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4131016135215759},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.410084068775177},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.24778208136558533},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.19273218512535095},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.14180392026901245},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.09122809767723083},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006620","descriptor_name":"Hip Fractures","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D006620","descriptor_name":"Hip Fractures","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D006620","descriptor_name":"Hip Fractures","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D006620","descriptor_name":"Hip Fractures","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012907","descriptor_name":"Smoking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012907","descriptor_name":"Smoking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012907","descriptor_name":"Smoking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012907","descriptor_name":"Smoking","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057286","descriptor_name":"Electronic Health Records","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12911-018-0723-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-018-0723-6","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-018-0723-6","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},{"id":"pmid:30616584","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30616584","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC medical informatics and decision making","raw_type":null},{"id":"pmh:oai:doaj.org/article:e9f50da104d643909e3b307c36a1274b","is_oa":false,"landing_page_url":"https://doaj.org/article/e9f50da104d643909e3b307c36a1274b","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Informatics and Decision Making, Vol 19, Iss 1, Pp 1-13 (2019)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:5301392","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6322223","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6322223","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6322223","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Med Inform Decis Mak","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12911-018-0723-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-018-0723-6","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/track/pdf/10.1186/s12911-018-0723-6","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.7099999785423279}],"awards":[{"id":"https://openalex.org/G1005989568","display_name":null,"funder_award_id":"U01TR002062","funder_id":"https://openalex.org/F4320337472","funder_display_name":"National Center for Advancing Translational Sciences"},{"id":"https://openalex.org/G1162245471","display_name":null,"funder_award_id":"U01 TR002062","funder_id":"https://openalex.org/F4320337472","funder_display_name":"National Center for Advancing Translational Sciences"},{"id":"https://openalex.org/G2232816332","display_name":null,"funder_award_id":"R01 EB019403","funder_id":"https://openalex.org/F4320337363","funder_display_name":"National Institute of Biomedical Imaging and Bioengineering"},{"id":"https://openalex.org/G2978838830","display_name":null,"funder_award_id":"P01 AG004875","funder_id":"https://openalex.org/F4320337337","funder_display_name":"National Institute on Aging"},{"id":"https://openalex.org/G3595008145","display_name":null,"funder_award_id":"R01LM11934","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G5305777876","display_name":null,"funder_award_id":"R01 AG034676","funder_id":"https://openalex.org/F4320337337","funder_display_name":"National Institute on Aging"},{"id":"https://openalex.org/G6071359385","display_name":null,"funder_award_id":"U01TR002062","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6287182811","display_name":null,"funder_award_id":"R01AG034676","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G683514226","display_name":null,"funder_award_id":"R01 LM011934","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"},{"id":"https://openalex.org/G7301361907","display_name":null,"funder_award_id":"R01GM102282","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G7377282972","display_name":null,"funder_award_id":"R01GM102282","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G792078797","display_name":null,"funder_award_id":"R01LM11934","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7999594839","display_name":null,"funder_award_id":"R01 GM102282","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G8282432848","display_name":null,"funder_award_id":"R01 AG052425","funder_id":"https://openalex.org/F4320337337","funder_display_name":"National Institute on Aging"},{"id":"https://openalex.org/G8898402732","display_name":null,"funder_award_id":"P01AG04875","funder_id":"https://openalex.org/F4320337337","funder_display_name":"National Institute on Aging"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332505","display_name":"U.S. Public Health Service","ror":"https://ror.org/05xf94514"},{"id":"https://openalex.org/F4320337337","display_name":"National Institute on Aging","ror":"https://ror.org/049v75w11"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337363","display_name":"National Institute of Biomedical Imaging and Bioengineering","ror":"https://ror.org/00372qc85"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"},{"id":"https://openalex.org/F4320337472","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":81,"referenced_works":["https://openalex.org/W86609720","https://openalex.org/W1152166452","https://openalex.org/W1515702051","https://openalex.org/W1516041857","https://openalex.org/W1731081199","https://openalex.org/W1880262756","https://openalex.org/W1972640883","https://openalex.org/W1985973929","https://openalex.org/W1994442671","https://openalex.org/W2002514548","https://openalex.org/W2004910511","https://openalex.org/W2048084002","https://openalex.org/W2049434052","https://openalex.org/W2050762896","https://openalex.org/W2064337796","https://openalex.org/W2095444228","https://openalex.org/W2101866620","https://openalex.org/W2104752900","https://openalex.org/W2107598941","https://openalex.org/W2108454922","https://openalex.org/W2109206523","https://openalex.org/W2110703451","https://openalex.org/W2112796928","https://openalex.org/W2113105800","https://openalex.org/W2116093010","https://openalex.org/W2119821739","https://openalex.org/W2131904035","https://openalex.org/W2132679783","https://openalex.org/W2137106918","https://openalex.org/W2138162199","https://openalex.org/W2145522203","https://openalex.org/W2150874198","https://openalex.org/W2176919981","https://openalex.org/W2197312909","https://openalex.org/W2197590357","https://openalex.org/W2216515714","https://openalex.org/W2250308783","https://openalex.org/W2250521169","https://openalex.org/W2250962271","https://openalex.org/W2250966211","https://openalex.org/W2344858100","https://openalex.org/W2394700483","https://openalex.org/W2404161646","https://openalex.org/W2408429828","https://openalex.org/W2467995757","https://openalex.org/W2484269232","https://openalex.org/W2532443329","https://openalex.org/W2570263858","https://openalex.org/W2583578793","https://openalex.org/W2609602893","https://openalex.org/W2610935556","https://openalex.org/W2618245351","https://openalex.org/W2618574054","https://openalex.org/W2620856883","https://openalex.org/W2621053657","https://openalex.org/W2726375170","https://openalex.org/W2735651584","https://openalex.org/W2740855840","https://openalex.org/W2745528378","https://openalex.org/W2746547352","https://openalex.org/W2765441486","https://openalex.org/W2768488789","https://openalex.org/W2770445088","https://openalex.org/W2784715555","https://openalex.org/W2784948075","https://openalex.org/W2787017859","https://openalex.org/W2787022481","https://openalex.org/W2787505626","https://openalex.org/W2787847379","https://openalex.org/W2911964244","https://openalex.org/W2919115771","https://openalex.org/W2950133940","https://openalex.org/W2951934944","https://openalex.org/W2962915384","https://openalex.org/W2963564990","https://openalex.org/W2963923670","https://openalex.org/W2996388935","https://openalex.org/W3106105822","https://openalex.org/W6639619044","https://openalex.org/W6712079353","https://openalex.org/W7028469425"],"related_works":["https://openalex.org/W2062195135","https://openalex.org/W2124655189","https://openalex.org/W4401284225","https://openalex.org/W2795079307","https://openalex.org/W2793058541","https://openalex.org/W1993282409","https://openalex.org/W1983629434","https://openalex.org/W2983008726","https://openalex.org/W2003798170","https://openalex.org/W3204019825"],"abstract_inverted_index":{"BACKGROUND:":[0],"Automatic":[1],"clinical":[2,17,29,59,296,317,342],"text":[3,30,60,297,318,343],"classification":[4,31,61,140,160,222,291,298,319,344],"is":[5,108,121,270],"a":[6,34,58,77,152],"natural":[7],"language":[8],"processing":[9],"(NLP)":[10],"technology":[11],"that":[12,230,244,268,280],"unlocks":[13],"information":[14],"embedded":[15],"in":[16,210,240],"narratives.":[18],"Machine":[19,174],"learning":[20,37,103,107,169,315],"approaches":[21],"have":[22,330],"been":[23],"shown":[24],"to":[25,44,69,81,201,254,273,316],"be":[26,286],"effective":[27,287],"for":[28,85,100,217,225,288,312],"tasks.":[32,292,345],"However,":[33],"successful":[35],"machine":[36,102,106,168,314],"model":[38],"usually":[39],"requires":[40],"extensive":[41],"human":[42,72,302],"efforts":[43,303],"create":[45],"labeled":[46,305],"training":[47,87,101,119,277,306],"data":[48,307],"and":[49,66,89,141,147,184,194,223,236,243,279,309,324,339],"conduct":[50],"feature":[51,310],"engineering.":[52],"In":[53],"this":[54,118,190],"study,":[55],"we":[56],"propose":[57],"paradigm":[62,128,267,283,299,335],"using":[63,151,189],"weak":[64,123,251,322],"supervision":[65,252,323],"deep":[67,97,325],"representation":[68,98],"reduce":[70,301],"these":[71],"efforts.":[73],"METHODS:":[74],"We":[75,125,163,228,259],"develop":[76],"rule-based":[78,256],"NLP":[79,116,257],"algorithm":[80],"automatically":[82],"generate":[83],"labels":[84,111],"the":[86,92,114,127,155,207,241,250,255,265,274,281,332],"data,":[88,278],"then":[90],"use":[91],"pre-trained":[93],"word":[94,231],"embeddings":[95,232],"as":[96,199],"features":[99,239],"models.":[104],"Since":[105],"trained":[109],"on":[110,130],"generated":[112],"by":[113,320,336],"automatic":[115],"algorithm,":[117],"process":[120],"called":[122],"supervision.":[124],"evaluat":[126],"effectiveness":[129,333],"two":[131,262,337],"institutional":[132,212,338],"case":[133,149],"studies":[134],"at":[135],"Mayo":[136,218],"Clinic:":[137],"smoking":[138,158,220],"status":[139,159,221],"proximal":[142],"femur":[143],"(hip)":[144],"fracture":[145,226],"classification,":[146],"one":[148,340],"study":[150],"public":[153],"dataset:":[154],"i2b2":[156],"2006":[157],"shared":[161,341],"task.":[162],"test":[164],"four":[165],"widely":[166],"used":[167,198],"models,":[170],"namely,":[171],"Support":[172],"Vector":[173],"(SVM),":[175],"Random":[176],"Forest":[177],"(RF),":[178],"Multilayer":[179],"Perceptron":[180],"Neural":[181,186],"Networks":[182,187],"(MLPNN),":[183],"Convolutional":[185],"(CNN),":[188],"paradigm.":[191],"Precision,":[192],"recall,":[193],"F1":[195],"score":[196],"are":[197],"metrics":[200],"evaluate":[202],"performance.":[203],"RESULTS:":[204],"CNN":[205,245,269],"achieves":[206],"best":[208],"performance":[209],"both":[211],"tasks":[213],"(F1":[214],"score:":[215],"0.92":[216],"Clinic":[219],"0.97":[224],"classification).":[227],"show":[229],"significantly":[233],"outperform":[234],"tf-idf":[235],"topic":[237],"modeling":[238],"paradigm,":[242],"captures":[246],"additional":[247],"patterns":[248],"from":[249],"compared":[253],"algorithms.":[258],"also":[260],"observe":[261],"drawbacks":[263],"of":[264,276,304,334],"proposed":[266,282,295],"more":[271],"sensitive":[272],"size":[275],"might":[284],"not":[285],"complex":[289],"multiclass":[290],"CONCLUSION:":[293],"The":[294,327],"could":[300],"creation":[308],"engineering":[311],"applying":[313],"leveraging":[321],"representation.":[326],"experimental":[328],"experiments":[329],"validated":[331]},"counts_by_year":[{"year":2026,"cited_by_count":10},{"year":2025,"cited_by_count":87},{"year":2024,"cited_by_count":70},{"year":2023,"cited_by_count":68},{"year":2022,"cited_by_count":83},{"year":2021,"cited_by_count":66},{"year":2020,"cited_by_count":28},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":1}],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}
