{"id":"https://openalex.org/W2479639685","doi":"https://doi.org/10.1186/s12911-016-0333-0","title":"Searching for rare diseases in PubMed: a blind comparison of Orphanet expert query and query based on terminological knowledge","display_name":"Searching for rare diseases in PubMed: a blind comparison of Orphanet expert query and query based on terminological knowledge","publication_year":2016,"publication_date":"2016-08-02","ids":{"openalex":"https://openalex.org/W2479639685","doi":"https://doi.org/10.1186/s12911-016-0333-0","mag":"2479639685","pmid":"https://pubmed.ncbi.nlm.nih.gov/27484923"},"language":"en","primary_location":{"id":"doi:10.1186/s12911-016-0333-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-016-0333-0","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-016-0333-0","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-016-0333-0","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5082866319","display_name":"Nicolas Griffon","orcid":"https://orcid.org/0000-0002-9602-6429"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210091279","display_name":"Universit\u00e9 Sorbonne Paris Nord","ror":"https://ror.org/0199hds37","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210091279"]},{"id":"https://openalex.org/I4210091437","display_name":"Sorbonne Paris Cit\u00e9","ror":"https://ror.org/001z21q04","country_code":"FR","type":"other","lineage":["https://openalex.org/I4210091437"]},{"id":"https://openalex.org/I4210108118","display_name":"Laboratoire d'Informatique, du Traitement de l'Information et des Syst\u00e8mes","ror":"https://ror.org/01f1vfy95","country_code":"FR","type":"facility","lineage":["https://openalex.org/I141576021","https://openalex.org/I4210105918","https://openalex.org/I4210105918","https://openalex.org/I4210105918","https://openalex.org/I4210108118","https://openalex.org/I62396329","https://openalex.org/I88814501"]},{"id":"https://openalex.org/I4210154623","display_name":"Centre Hospitalier Universitaire de Rouen","ror":"https://ror.org/04cdk4t75","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210154623"]},{"id":"https://openalex.org/I4389425324","display_name":"Laboratoire d'Informatique M\u00e9dicale et d'Ing\u00e9nierie des Connaissances en e-Sant\u00e9","ror":"https://ror.org/01jr1v359","country_code":null,"type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I39804081","https://openalex.org/I4210091279","https://openalex.org/I4389425324"]},{"id":"https://openalex.org/I62396329","display_name":"Universit\u00e9 de Rouen Normandie","ror":"https://ror.org/03nhjew95","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210105918","https://openalex.org/I62396329"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"N. Griffon","raw_affiliation_strings":["Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, 76031, Rouen Cedex, France. nicolas.griffon@chu-rouen.fr","INSERM, U1142, LIMICS, 75006, Paris, France; Sorbonne Universit\u00e9s, UPMC Univ Paris 06 UMR_S 1142, LIMICS, 75006, Paris, France; Univ Paris 13, Sorbonne Paris Cit\u00e9, LIMICS (UMR_S 1142), 93430, Villetaneuse, France. nicolas.griffon@chu-rouen.fr","Univ Paris 13, Sorbonne Paris Cit\u00e9, LIMICS (UMR_S 1142), Villetaneuse, France","Sorbonne Universit\u00e9s, UPMC Univ Paris 06 UMR_S 1142, LIMICS, 75006, Paris, France","Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, Rouen Cedex, France","INSERM, U1142, LIMICS, 75006, Paris, France"],"raw_orcid":"https://orcid.org/0000-0002-9602-6429","affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, 76031, Rouen Cedex, France. nicolas.griffon@chu-rouen.fr","institution_ids":["https://openalex.org/I62396329","https://openalex.org/I4210154623"]},{"raw_affiliation_string":"INSERM, U1142, LIMICS, 75006, Paris, France; Sorbonne Universit\u00e9s, UPMC Univ Paris 06 UMR_S 1142, LIMICS, 75006, Paris, France; Univ Paris 13, Sorbonne Paris Cit\u00e9, LIMICS (UMR_S 1142), 93430, Villetaneuse, France. nicolas.griffon@chu-rouen.fr","institution_ids":["https://openalex.org/I204730241","https://openalex.org/I4389425324","https://openalex.org/I4210091437","https://openalex.org/I4210091279","https://openalex.org/I39804081","https://openalex.org/I154526488"]},{"raw_affiliation_string":"Univ Paris 13, Sorbonne Paris Cit\u00e9, LIMICS (UMR_S 1142), Villetaneuse, France","institution_ids":["https://openalex.org/I204730241","https://openalex.org/I4389425324","https://openalex.org/I4210091437","https://openalex.org/I4210091279"]},{"raw_affiliation_string":"Sorbonne Universit\u00e9s, UPMC Univ Paris 06 UMR_S 1142, LIMICS, 75006, Paris, France","institution_ids":["https://openalex.org/I39804081","https://openalex.org/I204730241","https://openalex.org/I4389425324"]},{"raw_affiliation_string":"Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, Rouen Cedex, France","institution_ids":["https://openalex.org/I62396329","https://openalex.org/I4210108118"]},{"raw_affiliation_string":"INSERM, U1142, LIMICS, 75006, Paris, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I4389425324"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082810069","display_name":"Matthieu Schuers","orcid":"https://orcid.org/0000-0002-7355-4560"},"institutions":[{"id":"https://openalex.org/I4210108118","display_name":"Laboratoire d'Informatique, du Traitement de l'Information et des Syst\u00e8mes","ror":"https://ror.org/01f1vfy95","country_code":"FR","type":"facility","lineage":["https://openalex.org/I141576021","https://openalex.org/I4210105918","https://openalex.org/I4210105918","https://openalex.org/I4210105918","https://openalex.org/I4210108118","https://openalex.org/I62396329","https://openalex.org/I88814501"]},{"id":"https://openalex.org/I62396329","display_name":"Universit\u00e9 de Rouen Normandie","ror":"https://ror.org/03nhjew95","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210105918","https://openalex.org/I62396329"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"M. Schuers","raw_affiliation_strings":["Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, 76031, Rouen Cedex, France","Department of Family Practice, Rouen University, Rouen, France","Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, Rouen Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, 76031, Rouen Cedex, France","institution_ids":["https://openalex.org/I62396329"]},{"raw_affiliation_string":"Department of Family Practice, Rouen University, Rouen, France","institution_ids":["https://openalex.org/I62396329"]},{"raw_affiliation_string":"Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, Rouen Cedex, France","institution_ids":["https://openalex.org/I62396329","https://openalex.org/I4210108118"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005420349","display_name":"Ferdinand Dhombres","orcid":"https://orcid.org/0000-0003-3246-8727"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210091279","display_name":"Universit\u00e9 Sorbonne Paris Nord","ror":"https://ror.org/0199hds37","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210091279"]},{"id":"https://openalex.org/I4210091437","display_name":"Sorbonne Paris Cit\u00e9","ror":"https://ror.org/001z21q04","country_code":"FR","type":"other","lineage":["https://openalex.org/I4210091437"]},{"id":"https://openalex.org/I4210097159","display_name":"Assistance Publique \u2013 H\u00f4pitaux de Paris","ror":"https://ror.org/00pg5jh14","country_code":"FR","type":"healthcare","lineage":["https://openalex.org/I4210097159"]},{"id":"https://openalex.org/I4389425324","display_name":"Laboratoire d'Informatique M\u00e9dicale et d'Ing\u00e9nierie des Connaissances en e-Sant\u00e9","ror":"https://ror.org/01jr1v359","country_code":null,"type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I39804081","https://openalex.org/I4210091279","https://openalex.org/I4389425324"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"F. Dhombres","raw_affiliation_strings":["INSERM, U1142, LIMICS, 75006, Paris, France; Sorbonne Universit\u00e9s, UPMC Univ Paris 06 UMR_S 1142, LIMICS, 75006, Paris, France; Univ Paris 13, Sorbonne Paris Cit\u00e9, LIMICS (UMR_S 1142), 93430, Villetaneuse, France","Service de M\u00e9decine F\u0153tale, H\u00f4pital Trousseau - H\u00f4pitaux Universitaires de l'Est Parisien (APHP), Universit\u00e9 Pierre et Marie Curie, Paris, France","Service de M\u00e9decine F\u0153tale, H\u00f4pital Trousseau \u2013 H\u00f4pitaux Universitaires de l\u2019Est Parisien (APHP), Universit\u00e9 Pierre et Marie Curie, Paris, France","Sorbonne Universit\u00e9s, UPMC Univ Paris 06 UMR_S 1142, LIMICS, 75006, Paris, France","INSERM, U1142, LIMICS, 75006, Paris, France","Univ Paris 13, Sorbonne Paris Cit\u00e9, LIMICS (UMR_S 1142), Villetaneuse, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"INSERM, U1142, LIMICS, 75006, Paris, France; Sorbonne Universit\u00e9s, UPMC Univ Paris 06 UMR_S 1142, LIMICS, 75006, Paris, France; Univ Paris 13, Sorbonne Paris Cit\u00e9, LIMICS (UMR_S 1142), 93430, Villetaneuse, France","institution_ids":["https://openalex.org/I204730241","https://openalex.org/I4389425324","https://openalex.org/I4210091437","https://openalex.org/I4210091279","https://openalex.org/I39804081","https://openalex.org/I154526488"]},{"raw_affiliation_string":"Service de M\u00e9decine F\u0153tale, H\u00f4pital Trousseau - H\u00f4pitaux Universitaires de l'Est Parisien (APHP), Universit\u00e9 Pierre et Marie Curie, Paris, France","institution_ids":["https://openalex.org/I39804081","https://openalex.org/I4210097159"]},{"raw_affiliation_string":"Service de M\u00e9decine F\u0153tale, H\u00f4pital Trousseau \u2013 H\u00f4pitaux Universitaires de l\u2019Est Parisien (APHP), Universit\u00e9 Pierre et Marie Curie, Paris, France","institution_ids":["https://openalex.org/I39804081","https://openalex.org/I4210097159"]},{"raw_affiliation_string":"Sorbonne Universit\u00e9s, UPMC Univ Paris 06 UMR_S 1142, LIMICS, 75006, Paris, France","institution_ids":["https://openalex.org/I39804081","https://openalex.org/I204730241","https://openalex.org/I4389425324"]},{"raw_affiliation_string":"INSERM, U1142, LIMICS, 75006, Paris, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I4389425324"]},{"raw_affiliation_string":"Univ Paris 13, Sorbonne Paris Cit\u00e9, LIMICS (UMR_S 1142), Villetaneuse, France","institution_ids":["https://openalex.org/I204730241","https://openalex.org/I4389425324","https://openalex.org/I4210091437","https://openalex.org/I4210091279"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010636876","display_name":"Tayeb Merabti","orcid":null},"institutions":[{"id":"https://openalex.org/I4210108118","display_name":"Laboratoire d'Informatique, du Traitement de l'Information et des Syst\u00e8mes","ror":"https://ror.org/01f1vfy95","country_code":"FR","type":"facility","lineage":["https://openalex.org/I141576021","https://openalex.org/I4210105918","https://openalex.org/I4210105918","https://openalex.org/I4210105918","https://openalex.org/I4210108118","https://openalex.org/I62396329","https://openalex.org/I88814501"]},{"id":"https://openalex.org/I62396329","display_name":"Universit\u00e9 de Rouen Normandie","ror":"https://ror.org/03nhjew95","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210105918","https://openalex.org/I62396329"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"T. Merabti","raw_affiliation_strings":["Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, 76031, Rouen Cedex, France","Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, Rouen Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, 76031, Rouen Cedex, France","institution_ids":["https://openalex.org/I62396329"]},{"raw_affiliation_string":"Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, Rouen Cedex, France","institution_ids":["https://openalex.org/I62396329","https://openalex.org/I4210108118"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061941257","display_name":"Ga\u00ebtan Kerdelhu\u00e9","orcid":"https://orcid.org/0000-0001-5803-5554"},"institutions":[{"id":"https://openalex.org/I4210108118","display_name":"Laboratoire d'Informatique, du Traitement de l'Information et des Syst\u00e8mes","ror":"https://ror.org/01f1vfy95","country_code":"FR","type":"facility","lineage":["https://openalex.org/I141576021","https://openalex.org/I4210105918","https://openalex.org/I4210105918","https://openalex.org/I4210105918","https://openalex.org/I4210108118","https://openalex.org/I62396329","https://openalex.org/I88814501"]},{"id":"https://openalex.org/I62396329","display_name":"Universit\u00e9 de Rouen Normandie","ror":"https://ror.org/03nhjew95","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210105918","https://openalex.org/I62396329"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"G. Kerdelhu\u00e9","raw_affiliation_strings":["Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, 76031, Rouen Cedex, France","Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, Rouen Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, 76031, Rouen Cedex, France","institution_ids":["https://openalex.org/I62396329"]},{"raw_affiliation_string":"Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, Rouen Cedex, France","institution_ids":["https://openalex.org/I62396329","https://openalex.org/I4210108118"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023651051","display_name":"L\u00e6titia Rollin","orcid":"https://orcid.org/0000-0002-5454-4340"},"institutions":[{"id":"https://openalex.org/I4210108118","display_name":"Laboratoire d'Informatique, du Traitement de l'Information et des Syst\u00e8mes","ror":"https://ror.org/01f1vfy95","country_code":"FR","type":"facility","lineage":["https://openalex.org/I141576021","https://openalex.org/I4210105918","https://openalex.org/I4210105918","https://openalex.org/I4210105918","https://openalex.org/I4210108118","https://openalex.org/I62396329","https://openalex.org/I88814501"]},{"id":"https://openalex.org/I62396329","display_name":"Universit\u00e9 de Rouen Normandie","ror":"https://ror.org/03nhjew95","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210105918","https://openalex.org/I62396329"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"L. Rollin","raw_affiliation_strings":["Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, 76031, Rouen Cedex, France","Department of Occupational Medicine, Rouen University Hospital, Rouen, France","Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, Rouen Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, 76031, Rouen Cedex, France","institution_ids":["https://openalex.org/I62396329"]},{"raw_affiliation_string":"Department of Occupational Medicine, Rouen University Hospital, Rouen, France","institution_ids":["https://openalex.org/I62396329"]},{"raw_affiliation_string":"Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, Rouen Cedex, France","institution_ids":["https://openalex.org/I62396329","https://openalex.org/I4210108118"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083607574","display_name":"St\u00e9fan Darmoni","orcid":null},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I39804081","display_name":"Sorbonne Universit\u00e9","ror":"https://ror.org/02en5vm52","country_code":"FR","type":"education","lineage":["https://openalex.org/I39804081"]},{"id":"https://openalex.org/I4210091279","display_name":"Universit\u00e9 Sorbonne Paris Nord","ror":"https://ror.org/0199hds37","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210091279"]},{"id":"https://openalex.org/I4210091437","display_name":"Sorbonne Paris Cit\u00e9","ror":"https://ror.org/001z21q04","country_code":"FR","type":"other","lineage":["https://openalex.org/I4210091437"]},{"id":"https://openalex.org/I4210108118","display_name":"Laboratoire d'Informatique, du Traitement de l'Information et des Syst\u00e8mes","ror":"https://ror.org/01f1vfy95","country_code":"FR","type":"facility","lineage":["https://openalex.org/I141576021","https://openalex.org/I4210105918","https://openalex.org/I4210105918","https://openalex.org/I4210105918","https://openalex.org/I4210108118","https://openalex.org/I62396329","https://openalex.org/I88814501"]},{"id":"https://openalex.org/I4389425324","display_name":"Laboratoire d'Informatique M\u00e9dicale et d'Ing\u00e9nierie des Connaissances en e-Sant\u00e9","ror":"https://ror.org/01jr1v359","country_code":null,"type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I39804081","https://openalex.org/I4210091279","https://openalex.org/I4389425324"]},{"id":"https://openalex.org/I62396329","display_name":"Universit\u00e9 de Rouen Normandie","ror":"https://ror.org/03nhjew95","country_code":"FR","type":"education","lineage":["https://openalex.org/I4210105918","https://openalex.org/I62396329"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"S. J. Darmoni","raw_affiliation_strings":["Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, 76031, Rouen Cedex, France","INSERM, U1142, LIMICS, 75006, Paris, France; Sorbonne Universit\u00e9s, UPMC Univ Paris 06 UMR_S 1142, LIMICS, 75006, Paris, France; Univ Paris 13, Sorbonne Paris Cit\u00e9, LIMICS (UMR_S 1142), 93430, Villetaneuse, France","Univ Paris 13, Sorbonne Paris Cit\u00e9, LIMICS (UMR_S 1142), Villetaneuse, France","INSERM, U1142, LIMICS, 75006, Paris, France","Sorbonne Universit\u00e9s, UPMC Univ Paris 06 UMR_S 1142, LIMICS, 75006, Paris, France","Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, Rouen Cedex, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, 76031, Rouen Cedex, France","institution_ids":["https://openalex.org/I62396329"]},{"raw_affiliation_string":"INSERM, U1142, LIMICS, 75006, Paris, France; Sorbonne Universit\u00e9s, UPMC Univ Paris 06 UMR_S 1142, LIMICS, 75006, Paris, France; Univ Paris 13, Sorbonne Paris Cit\u00e9, LIMICS (UMR_S 1142), 93430, Villetaneuse, France","institution_ids":["https://openalex.org/I204730241","https://openalex.org/I4389425324","https://openalex.org/I4210091437","https://openalex.org/I4210091279","https://openalex.org/I39804081","https://openalex.org/I154526488"]},{"raw_affiliation_string":"Univ Paris 13, Sorbonne Paris Cit\u00e9, LIMICS (UMR_S 1142), Villetaneuse, France","institution_ids":["https://openalex.org/I204730241","https://openalex.org/I4389425324","https://openalex.org/I4210091437","https://openalex.org/I4210091279"]},{"raw_affiliation_string":"INSERM, U1142, LIMICS, 75006, Paris, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I4389425324"]},{"raw_affiliation_string":"Sorbonne Universit\u00e9s, UPMC Univ Paris 06 UMR_S 1142, LIMICS, 75006, Paris, France","institution_ids":["https://openalex.org/I39804081","https://openalex.org/I204730241","https://openalex.org/I4389425324"]},{"raw_affiliation_string":"Department of Biomedical Informatics, Rouen University Hospital, TIBS, LITIS EA 4108, Rouen University, Rouen Cedex, France","institution_ids":["https://openalex.org/I62396329","https://openalex.org/I4210108118"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5082866319"],"corresponding_institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I39804081","https://openalex.org/I4210091279","https://openalex.org/I4210091437","https://openalex.org/I4210108118","https://openalex.org/I4210154623","https://openalex.org/I4389425324","https://openalex.org/I62396329"],"apc_list":{"value":1570,"currency":"GBP","value_usd":1925},"apc_paid":{"value":1570,"currency":"GBP","value_usd":1925},"fwci":0.1741,"has_fulltext":true,"cited_by_count":22,"citation_normalized_percentile":{"value":0.64491547,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"16","issue":"1","first_page":"101","last_page":"101"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9311000108718872,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9311000108718872,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.039000000804662704,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12881","display_name":"linguistics and terminology studies","score":0.003000000026077032,"subfield":{"id":"https://openalex.org/subfields/1203","display_name":"Language and Linguistics"},"field":{"id":"https://openalex.org/fields/12","display_name":"Arts and Humanities"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8506722450256348},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.681368887424469},{"id":"https://openalex.org/keywords/query-expansion","display_name":"Query expansion","score":0.6463910937309265},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.5831806063652039},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5321907997131348},{"id":"https://openalex.org/keywords/recall","display_name":"Recall","score":0.4799233078956604},{"id":"https://openalex.org/keywords/web-query-classification","display_name":"Web query classification","score":0.47094759345054626},{"id":"https://openalex.org/keywords/web-search-query","display_name":"Web search query","score":0.46152299642562866},{"id":"https://openalex.org/keywords/precision-and-recall","display_name":"Precision and recall","score":0.4209480285644531},{"id":"https://openalex.org/keywords/search-engine","display_name":"Search engine","score":0.3285997211933136}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8506722450256348},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.681368887424469},{"id":"https://openalex.org/C99016210","wikidata":"https://www.wikidata.org/wiki/Q5488129","display_name":"Query expansion","level":2,"score":0.6463910937309265},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.5831806063652039},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5321907997131348},{"id":"https://openalex.org/C100660578","wikidata":"https://www.wikidata.org/wiki/Q18733","display_name":"Recall","level":2,"score":0.4799233078956604},{"id":"https://openalex.org/C118689300","wikidata":"https://www.wikidata.org/wiki/Q7978614","display_name":"Web query classification","level":4,"score":0.47094759345054626},{"id":"https://openalex.org/C164120249","wikidata":"https://www.wikidata.org/wiki/Q995982","display_name":"Web search query","level":3,"score":0.46152299642562866},{"id":"https://openalex.org/C81669768","wikidata":"https://www.wikidata.org/wiki/Q2359161","display_name":"Precision and recall","level":2,"score":0.4209480285644531},{"id":"https://openalex.org/C97854310","wikidata":"https://www.wikidata.org/wiki/Q19541","display_name":"Search engine","level":2,"score":0.3285997211933136},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001634","descriptor_name":"Bibliographies as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001634","descriptor_name":"Bibliographies as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001634","descriptor_name":"Bibliographies as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009626","descriptor_name":"Terminology as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035583","descriptor_name":"Rare Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035583","descriptor_name":"Rare Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035583","descriptor_name":"Rare Diseases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12911-016-0333-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-016-0333-0","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-016-0333-0","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},{"id":"pmid:27484923","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27484923","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC medical informatics and decision making","raw_type":null},{"id":"pmh:oai:HAL:inserm-01350880v1","is_oa":false,"landing_page_url":"https://inserm.hal.science/inserm-01350880","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Informatics and Decision Making, 2015, 16 (1), pp.101. &#x27E8;10.1186/s12911-016-0333-0&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:pubmedcentral.nih.gov:4970261","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4970261","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Med Inform Decis Mak","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12911-016-0333-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12911-016-0333-0","pdf_url":"https://bmcmedinformdecismak.biomedcentral.com/counter/pdf/10.1186/s12911-016-0333-0","source":{"id":"https://openalex.org/S107516304","display_name":"BMC Medical Informatics and Decision Making","issn_l":"1472-6947","issn":["1472-6947"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Informatics and Decision Making","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4399999976158142,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2479639685.pdf","grobid_xml":"https://content.openalex.org/works/W2479639685.grobid-xml"},"referenced_works_count":16,"referenced_works":["https://openalex.org/W111490008","https://openalex.org/W197205732","https://openalex.org/W1513289554","https://openalex.org/W1965708122","https://openalex.org/W1966492236","https://openalex.org/W2033176810","https://openalex.org/W2039278176","https://openalex.org/W2048495389","https://openalex.org/W2072551288","https://openalex.org/W2152143870","https://openalex.org/W2156443053","https://openalex.org/W2186589561","https://openalex.org/W2441101524","https://openalex.org/W2598936606","https://openalex.org/W2906992465","https://openalex.org/W4317669088"],"related_works":["https://openalex.org/W2096359267","https://openalex.org/W2026738364","https://openalex.org/W2901901036","https://openalex.org/W3008917487","https://openalex.org/W2124814993","https://openalex.org/W1521725692","https://openalex.org/W2093300859","https://openalex.org/W2013069866","https://openalex.org/W2113390685","https://openalex.org/W3197639690"],"abstract_inverted_index":{"BACKGROUND:":[0],"Despite":[1],"international":[2],"initiatives":[3],"like":[4],"Orphanet,":[5],"it":[6,38],"remains":[7],"difficult":[8],"to":[9,22,36,68,117,159,212],"find":[10],"up-to-date":[11],"information":[12],"about":[13],"rare":[14,57,80,84,133,236],"diseases.":[15,81,237],"The":[16,223],"aim":[17],"of":[18,27,75,108,182],"this":[19,228],"study":[20,229],"is":[21],"propose":[23],"an":[24],"exhaustive":[25],"set":[26],"queries":[28,41,78,149,160,193,201,210,218,225],"for":[29,79,101,234,244],"PubMed":[30],"based":[31,42,95],"on":[32,43,96],"terminological":[33,77,97,142,178,192,217,224],"knowledge":[34,98],"and":[35,63,124,177],"evaluate":[37],"versus":[39],"the":[40,47,72,109,174],"expertise":[44],"provided":[45,150],"by":[46,89,103,151],"most":[48],"frequently":[49],"used":[50,116],"resource":[51],"in":[52,144,180,227],"Europe:":[53],"Orphanet.":[54,152],"METHODS:":[55],"Four":[56],"disease":[58,134],"terminologies":[59],"(MeSH,":[60],"OMIM,":[61],"HPO":[62],"HRDO)":[64],"were":[65,99,126,156,169],"manually":[66],"mapped":[67],"each":[69,131],"other":[70],"permitting":[71],"automatic":[73],"creation":[74],"expended":[76],"For":[82,130],"30":[83,86],"diseases,":[85],"citations":[87,155,196,215],"retrieved":[88,194],"Orphanet":[90,132],"expert":[91],"query":[92,94,176,179],"and/or":[93],"assessed":[100],"relevance":[102],"two":[104],"independent":[105],"reviewers":[106],"unaware":[107],"query's":[110],"origin.":[111],"An":[112],"adjudication":[113],"procedure":[114],"was":[115,139],"resolve":[118],"any":[119],"discrepancy.":[120],"Precision,":[121],"relative":[122],"recall":[123,248],"F-measure":[125],"all":[127,235],"computed.":[128],"RESULTS:":[129],"(n":[135],"=":[136,189,206],"8982),":[137],"there":[138],"a":[140,165,241],"corresponding":[141],"query,":[143],"contrast":[145],"with":[146,161],"only":[147,164],"2284":[148],"Only":[153],"553":[154],"evaluated":[157],"due":[158],"0":[162],"or":[163,247],"few":[166],"hits.":[167],"There":[168],"no":[170],"significant":[171],"differences":[172],"between":[173],"Orpha":[175,200,209],"terms":[181],"precision,":[183],"respectively":[184],"0.61":[185],"vs":[186],"0.52":[187],"(p":[188,219],"0.13).":[190],"Nevertheless,":[191],"more":[195,197],"often":[198],"than":[199,216],"(0.57":[202],"vs.":[203],"0.33;":[204],"p":[205],"0.01).":[207],"Interestingly,":[208],"seemed":[211],"retrieve":[213],"older":[214],"<":[220],"0.0001).":[221],"CONCLUSION:":[222],"proposed":[226],"are":[230],"now":[231],"currently":[232],"available":[233],"They":[238],"may":[239],"be":[240],"useful":[242],"tool":[243],"both":[245],"precision":[246],"oriented":[249],"literature":[250],"search.":[251]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":10},{"year":2019,"cited_by_count":1}],"updated_date":"2026-05-07T13:39:58.223016","created_date":"2025-10-10T00:00:00"}
