{"id":"https://openalex.org/W4296120535","doi":"https://doi.org/10.1186/s12880-022-00893-4","title":"AbdomenNet: deep neural network for abdominal organ segmentation in epidemiologic imaging studies","display_name":"AbdomenNet: deep neural network for abdominal organ segmentation in epidemiologic imaging studies","publication_year":2022,"publication_date":"2022-09-17","ids":{"openalex":"https://openalex.org/W4296120535","doi":"https://doi.org/10.1186/s12880-022-00893-4","pmid":"https://pubmed.ncbi.nlm.nih.gov/36115938"},"language":"en","primary_location":{"id":"doi:10.1186/s12880-022-00893-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12880-022-00893-4","pdf_url":"https://bmcmedimaging.biomedcentral.com/counter/pdf/10.1186/s12880-022-00893-4","source":{"id":"https://openalex.org/S6505649","display_name":"BMC Medical Imaging","issn_l":"1471-2342","issn":["1471-2342"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Imaging","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcmedimaging.biomedcentral.com/counter/pdf/10.1186/s12880-022-00893-4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5027721454","display_name":"Anne-Marie Rickmann","orcid":"https://orcid.org/0000-0002-7432-0782"},"institutions":[{"id":"https://openalex.org/I4210164862","display_name":"Artificial Intelligence in Medicine (Canada)","ror":"https://ror.org/05p590m36","country_code":"CA","type":"company","lineage":["https://openalex.org/I4210164862"]},{"id":"https://openalex.org/I8204097","display_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/05591te55","country_code":"DE","type":"education","lineage":["https://openalex.org/I8204097"]}],"countries":["CA","DE"],"is_corresponding":true,"raw_author_name":"Anne-Marie Rickmann","raw_affiliation_strings":["Lab for Artificial Intelligence in Medical Imaging, Department of Medicine, Ludwig Maximilians University Munich, Munich, Germany. arickman@med.lmu.de","Lab for Artificial Intelligence in Medical Imaging, Institute of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany. arickman@med.lmu.de","Lab for Artificial Intelligence in Medical Imaging, Department of Medicine, Ludwig Maximilians University Munich, Munich, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lab for Artificial Intelligence in Medical Imaging, Department of Medicine, Ludwig Maximilians University Munich, Munich, Germany. arickman@med.lmu.de","institution_ids":["https://openalex.org/I4210164862","https://openalex.org/I8204097"]},{"raw_affiliation_string":"Lab for Artificial Intelligence in Medical Imaging, Institute of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany. arickman@med.lmu.de","institution_ids":["https://openalex.org/I4210164862"]},{"raw_affiliation_string":"Lab for Artificial Intelligence in Medical Imaging, Department of Medicine, Ludwig Maximilians University Munich, Munich, Germany","institution_ids":["https://openalex.org/I8204097"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043456736","display_name":"Jyotirmay Senapati","orcid":null},"institutions":[{"id":"https://openalex.org/I8204097","display_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/05591te55","country_code":"DE","type":"education","lineage":["https://openalex.org/I8204097"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jyotirmay Senapati","raw_affiliation_strings":["Lab for Artificial Intelligence in Medical Imaging, Department of Medicine, Ludwig Maximilians University Munich, Munich, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lab for Artificial Intelligence in Medical Imaging, Department of Medicine, Ludwig Maximilians University Munich, Munich, Germany","institution_ids":["https://openalex.org/I8204097"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101552721","display_name":"\u041e\u043a\u0441\u0430\u043d\u0430 \u041a\u043e\u0432\u0430\u043b\u0435\u043d\u043a\u043e","orcid":"https://orcid.org/0000-0001-6386-6766"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Oksana Kovalenko","raw_affiliation_strings":["Lab for Artificial Intelligence in Medical Imaging, Institute of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lab for Artificial Intelligence in Medical Imaging, Institute of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088727034","display_name":"Annette Peters","orcid":"https://orcid.org/0000-0001-6645-0985"},"institutions":[{"id":"https://openalex.org/I3018134672","display_name":"Helmholtz Zentrum M\u00fcnchen","ror":"https://ror.org/00cfam450","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I3018134672"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Annette Peters","raw_affiliation_strings":["Institute of Epidemiology, Helmholtz Zentrum Munich, Munich, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Epidemiology, Helmholtz Zentrum Munich, Munich, Germany","institution_ids":["https://openalex.org/I3018134672"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032266841","display_name":"Fabian Bamberg","orcid":"https://orcid.org/0000-0002-7460-3942"},"institutions":[{"id":"https://openalex.org/I161046081","display_name":"University of Freiburg","ror":"https://ror.org/0245cg223","country_code":"DE","type":"education","lineage":["https://openalex.org/I161046081"]},{"id":"https://openalex.org/I2801240073","display_name":"University Medical Center Freiburg","ror":"https://ror.org/03vzbgh69","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I2801240073"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Fabian Bamberg","raw_affiliation_strings":["Department of Diagnostic and Interventional Radiology, Medical Center-University of Freiburg, Faculty of Medicine, University Freiburg, Freiburg, Germany","Department of Diagnostic and Interventional Radiology, Medical Center-University of Freiburg,  Faculty of Medicine, University Freiburg, Freiburg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Diagnostic and Interventional Radiology, Medical Center-University of Freiburg, Faculty of Medicine, University Freiburg, Freiburg, Germany","institution_ids":["https://openalex.org/I2801240073"]},{"raw_affiliation_string":"Department of Diagnostic and Interventional Radiology, Medical Center-University of Freiburg,  Faculty of Medicine, University Freiburg, Freiburg, Germany","institution_ids":["https://openalex.org/I2801240073","https://openalex.org/I161046081"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5069195910","display_name":"Christian Wachinger","orcid":"https://orcid.org/0000-0002-3652-1874"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]},{"id":"https://openalex.org/I8204097","display_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/05591te55","country_code":"DE","type":"education","lineage":["https://openalex.org/I8204097"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Christian Wachinger","raw_affiliation_strings":["Lab for Artificial Intelligence in Medical Imaging, Department of Medicine, Ludwig Maximilians University Munich, Munich, Germany","Lab for Artificial Intelligence in Medical Imaging, Institute of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lab for Artificial Intelligence in Medical Imaging, Department of Medicine, Ludwig Maximilians University Munich, Munich, Germany","institution_ids":["https://openalex.org/I8204097"]},{"raw_affiliation_string":"Lab for Artificial Intelligence in Medical Imaging, Institute of Diagnostic and Interventional Radiology, Technical University of Munich, Munich, Germany","institution_ids":["https://openalex.org/I62916508"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5027721454"],"corresponding_institution_ids":["https://openalex.org/I4210164862","https://openalex.org/I8204097"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1960,"currency":"EUR","value_usd":2113},"fwci":1.5809,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.8242843,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"22","issue":"1","first_page":"168","last_page":"168"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11885","display_name":"MRI in cancer diagnosis","score":0.18250000476837158,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11885","display_name":"MRI in cancer diagnosis","score":0.18250000476837158,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11775","display_name":"COVID-19 diagnosis using AI","score":0.07989999651908875,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.07150000333786011,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7170401215553284},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.685076892375946},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.6580158472061157},{"id":"https://openalex.org/keywords/deep-learning","display_name":"Deep learning","score":0.5542768239974976},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.4974532425403595},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4657154083251953},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.4350457787513733},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.42651355266571045},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.41315871477127075},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.24122190475463867}],"concepts":[{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7170401215553284},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.685076892375946},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.6580158472061157},{"id":"https://openalex.org/C108583219","wikidata":"https://www.wikidata.org/wiki/Q197536","display_name":"Deep learning","level":2,"score":0.5542768239974976},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.4974532425403595},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4657154083251953},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.4350457787513733},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.42651355266571045},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.41315871477127075},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.24122190475463867},{"id":"https://openalex.org/C99454951","wikidata":"https://www.wikidata.org/wiki/Q932068","display_name":"Environmental health","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000005","descriptor_name":"Abdomen","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D000005","descriptor_name":"Abdomen","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D000005","descriptor_name":"Abdomen","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D000005","descriptor_name":"Abdomen","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D000005","descriptor_name":"Abdomen","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D008279","descriptor_name":"Magnetic Resonance Imaging","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D014867","descriptor_name":"Water","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014867","descriptor_name":"Water","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014867","descriptor_name":"Water","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014867","descriptor_name":"Water","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014867","descriptor_name":"Water","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015331","descriptor_name":"Cohort Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015331","descriptor_name":"Cohort Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015331","descriptor_name":"Cohort Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015331","descriptor_name":"Cohort Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015331","descriptor_name":"Cohort Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":10,"locations":[{"id":"doi:10.1186/s12880-022-00893-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12880-022-00893-4","pdf_url":"https://bmcmedimaging.biomedcentral.com/counter/pdf/10.1186/s12880-022-00893-4","source":{"id":"https://openalex.org/S6505649","display_name":"BMC Medical Imaging","issn_l":"1471-2342","issn":["1471-2342"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Imaging","raw_type":"journal-article"},{"id":"pmid:36115938","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36115938","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC medical imaging","raw_type":null},{"id":"pmh:oai:doaj.org/article:a2d2903fc2cb474da85a0b16945040ca","is_oa":true,"landing_page_url":"https://doaj.org/article/a2d2903fc2cb474da85a0b16945040ca","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Imaging, Vol 22, Iss 1, Pp 1-11 (2022)","raw_type":"article"},{"id":"pmh:oai:epub.ub.uni-muenchen.de:104185","is_oa":true,"landing_page_url":"http://epub.ub.uni-muenchen.de/104185/1/s12880-022-00893-4.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S6505649","display_name":"BMC Medical Imaging","issn_l":"1471-2342","issn":["1471-2342"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Imaging","raw_type":"doc-type:article"},{"id":"pmh:oai:epub.ub.uni-muenchen.de:104530","is_oa":true,"landing_page_url":"https://epub.ub.uni-muenchen.de/104530/","pdf_url":null,"source":{"id":"https://openalex.org/S4306401845","display_name":"Open access LMU (Ludwid Maxmilian's Universitat Munchen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I8204097","host_organization_name":"Ludwig-Maximilians-Universit\u00e4t M\u00fcnchen","host_organization_lineage":["https://openalex.org/I8204097"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Medical Imaging","raw_type":"doc-type:article"},{"id":"pmh:oai:mediatum.ub.tum.de:node/1695740","is_oa":false,"landing_page_url":"https://mediatum.ub.tum.de/1695740","pdf_url":null,"source":{"id":"https://openalex.org/S4377196330","display_name":"mediaTUM  (Technical University of Munich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I62916508","host_organization_name":"Technical University of Munich","host_organization_lineage":["https://openalex.org/I62916508"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"article"},{"id":"pmh:oai:mediatum.ub.tum.de:node/1763216","is_oa":true,"landing_page_url":"https://mediatum.ub.tum.de/1763216","pdf_url":null,"source":{"id":"https://openalex.org/S4377196330","display_name":"mediaTUM  (Technical University of Munich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I62916508","host_organization_name":"Technical University of Munich","host_organization_lineage":["https://openalex.org/I62916508"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:opus-zb.helmholtz-muenchen.de:66216","is_oa":true,"landing_page_url":"https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=66216","pdf_url":null,"source":{"id":"https://openalex.org/S4377196115","display_name":"Site cant be reached","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Med. Imaging 22:168 (2022)","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9482195","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9482195","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Med Imaging","raw_type":"Text"},{"id":"pmh:oai:push-zb.helmholtz-munich.de:66216","is_oa":false,"landing_page_url":"https://push-zb.helmholtz-munich.de/frontdoor.php?source_opus=66216","pdf_url":null,"source":{"id":"https://openalex.org/S7407055352","display_name":"PuSH - Publication Server of Helmholtz Zentrum M\u00fcnchen","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Med. Imaging 22:168 (2022)","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1186/s12880-022-00893-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12880-022-00893-4","pdf_url":"https://bmcmedimaging.biomedcentral.com/counter/pdf/10.1186/s12880-022-00893-4","source":{"id":"https://openalex.org/S6505649","display_name":"BMC Medical Imaging","issn_l":"1471-2342","issn":["1471-2342"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Medical Imaging","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.5}],"awards":[{"id":"https://openalex.org/G5850737185","display_name":null,"funder_award_id":"MC_PC_17228","funder_id":"https://openalex.org/F4320334626","funder_display_name":"Medical Research Council"}],"funders":[{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4296120535.pdf","grobid_xml":"https://content.openalex.org/works/W4296120535.grobid-xml"},"referenced_works_count":40,"referenced_works":["https://openalex.org/W1677182931","https://openalex.org/W1745334888","https://openalex.org/W1901129140","https://openalex.org/W2004293194","https://openalex.org/W2010115471","https://openalex.org/W2066618515","https://openalex.org/W2117340355","https://openalex.org/W2133003941","https://openalex.org/W2143781397","https://openalex.org/W2170585273","https://openalex.org/W2412453619","https://openalex.org/W2564841362","https://openalex.org/W2572730214","https://openalex.org/W2752782242","https://openalex.org/W2791680898","https://openalex.org/W2792124446","https://openalex.org/W2793923128","https://openalex.org/W2799142782","https://openalex.org/W2805381319","https://openalex.org/W2888493720","https://openalex.org/W2901434856","https://openalex.org/W2963446712","https://openalex.org/W2977883299","https://openalex.org/W2981994710","https://openalex.org/W2982043723","https://openalex.org/W2988396473","https://openalex.org/W3002569343","https://openalex.org/W3005413869","https://openalex.org/W3006047402","https://openalex.org/W3032464132","https://openalex.org/W3047439539","https://openalex.org/W3082363068","https://openalex.org/W3098509689","https://openalex.org/W3101333263","https://openalex.org/W3103014197","https://openalex.org/W3103370327","https://openalex.org/W3112701542","https://openalex.org/W4200456386","https://openalex.org/W4213212227","https://openalex.org/W4250482878"],"related_works":["https://openalex.org/W4293226380","https://openalex.org/W4226493464","https://openalex.org/W4312417841","https://openalex.org/W3193565141","https://openalex.org/W3133861977","https://openalex.org/W4388446985","https://openalex.org/W2951211570","https://openalex.org/W3167935049","https://openalex.org/W3103566983","https://openalex.org/W3029198973"],"abstract_inverted_index":{"BACKGROUND:":[0],"Whole-body":[1],"imaging":[2,67,140],"has":[3],"recently":[4],"been":[5],"added":[6],"to":[7,61,135,142,149,172,230],"large-scale":[8],"epidemiological":[9],"studies":[10,92,141],"providing":[11],"novel":[12,109],"opportunities":[13],"for":[14,45,93,184,195],"investigating":[15],"abdominal":[16,50,103,209],"organs.":[17,104],"However,":[18],"the":[19,46,70,90,154,160,167],"segmentation":[20,48,98,169],"of":[21,49,85,97,111,159,208],"these":[22],"organs":[23,51,186,210],"is":[24,28,133,181,219],"required":[25],"beforehand,":[26],"which":[27,100],"time":[29],"consuming,":[30],"particularly":[31],"on":[32,52,222],"such":[33],"a":[34,41,83,108,216,223],"large":[35],"scale.":[36],"METHODS:":[37],"We":[38,81],"introduce":[39],"AbdomentNet,":[40],"deep":[42,144],"neural":[43,145],"network":[44,106,217],"automated":[47,203],"two-point":[53],"Dixon":[54,161],"MRI":[55,63,87],"scans.":[56],"A":[57],"pre-processing":[58],"pipeline":[59,204],"enables":[60],"process":[62],"scans":[64,88],"from":[65,138],"different":[66,139],"studies,":[68],"namely":[69],"German":[71],"National":[72],"Cohort,":[73],"UK":[74],"Biobank,":[75],"and":[76,114,116,156,189,191,193,197],"Kohorte":[77],"im":[78],"Raum":[79],"Augsburg.":[80],"chose":[82],"total":[84],"61":[86],"across":[89,211],"three":[91],"training":[94,122,150],"an":[95],"ensemble":[96],"networks,":[99],"segment":[101],"eight":[102],"Our":[105,128,201],"presents":[107],"combination":[110],"octave":[112],"convolutions":[113],"squeeze":[115],"excitation":[117],"layers,":[118],"as":[119,121,163],"well":[120,229],"with":[123],"stochastic":[124],"weight":[125],"averaging.":[126],"RESULTS:":[127],"experiments":[129],"demonstrate":[130],"that":[131,218],"it":[132],"beneficial":[134],"combine":[136],"data":[137],"train":[143],"networks":[146],"in":[147],"contrast":[148,174],"separate":[151],"networks.":[152],"Combining":[153],"water":[155],"opposed-phase":[157],"contrasts":[158],"sequence":[162],"input":[164],"channels,":[165],"yields":[166],"highest":[168],"accuracy,":[170],"compared":[171],"single":[173,224],"inputs.":[175],"The":[176],"mean":[177],"Dice":[178],"similarity":[179],"coefficient":[180],"above":[182],"0.9":[183],"larger":[185],"liver,":[187],"spleen,":[188],"kidneys,":[190],"0.71":[192],"0.74":[194],"gallbladder":[196],"pancreas,":[198],"respectively.":[199],"CONCLUSIONS:":[200],"fully":[202],"provides":[205],"high-quality":[206],"segmentations":[207],"population":[212],"studies.":[213],"In":[214],"contrast,":[215],"only":[220],"trained":[221],"dataset":[225],"does":[226],"not":[227],"generalize":[228],"other":[231],"datasets.":[232]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}