{"id":"https://openalex.org/W2229421811","doi":"https://doi.org/10.1186/s12864-015-2300-z","title":"Identification of miRNA-mRNA regulatory modules by exploring collective group relationships","display_name":"Identification of miRNA-mRNA regulatory modules by exploring collective group relationships","publication_year":2016,"publication_date":"2016-01-01","ids":{"openalex":"https://openalex.org/W2229421811","doi":"https://doi.org/10.1186/s12864-015-2300-z","mag":"2229421811","pmid":"https://pubmed.ncbi.nlm.nih.gov/26817421"},"language":"en","primary_location":{"id":"doi:10.1186/s12864-015-2300-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12864-015-2300-z","pdf_url":null,"source":{"id":"https://openalex.org/S28614077","display_name":"BMC Genomics","issn_l":"1471-2164","issn":["1471-2164"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1186/s12864-015-2300-z","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056372163","display_name":"S. M. Masud Karim","orcid":"https://orcid.org/0000-0001-9567-2181"},"institutions":[{"id":"https://openalex.org/I170239107","display_name":"University of South Australia","ror":"https://ror.org/01p93h210","country_code":"AU","type":"education","lineage":["https://openalex.org/I170239107"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"S. M. Masud Karim","raw_affiliation_strings":["School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia. masud.karim@mymail.unisa.edu.au","School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia. masud.karim@mymail.unisa.edu.au","institution_ids":[]},{"raw_affiliation_string":"School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia","institution_ids":["https://openalex.org/I170239107"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100383342","display_name":"Lin Liu","orcid":"https://orcid.org/0000-0003-2843-5738"},"institutions":[{"id":"https://openalex.org/I170239107","display_name":"University of South Australia","ror":"https://ror.org/01p93h210","country_code":"AU","type":"education","lineage":["https://openalex.org/I170239107"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Lin Liu","raw_affiliation_strings":["School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia. Lin.Liu@unisa.edu.au","School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia. Lin.Liu@unisa.edu.au","institution_ids":[]},{"raw_affiliation_string":"School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia","institution_ids":["https://openalex.org/I170239107"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035846381","display_name":"Thuc Duy Le","orcid":"https://orcid.org/0000-0002-9732-4313"},"institutions":[{"id":"https://openalex.org/I170239107","display_name":"University of South Australia","ror":"https://ror.org/01p93h210","country_code":"AU","type":"education","lineage":["https://openalex.org/I170239107"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Thuc Duy Le","raw_affiliation_strings":["School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia. Thuc.Le@unisa.edu.au","School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia. Thuc.Le@unisa.edu.au","institution_ids":[]},{"raw_affiliation_string":"School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia","institution_ids":["https://openalex.org/I170239107"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5012177739","display_name":"Jiuyong Li","orcid":"https://orcid.org/0000-0002-9023-1878"},"institutions":[{"id":"https://openalex.org/I170239107","display_name":"University of South Australia","ror":"https://ror.org/01p93h210","country_code":"AU","type":"education","lineage":["https://openalex.org/I170239107"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Jiuyong Li","raw_affiliation_strings":["School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia. Jiuyong.Li@unisa.edu.au","School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia. Jiuyong.Li@unisa.edu.au","institution_ids":[]},{"raw_affiliation_string":"School of Information Technology and Mathematical Sciences, University of South Australia, Mawson Lakes, Adelaide, 5095, SA, Australia","institution_ids":["https://openalex.org/I170239107"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5056372163"],"corresponding_institution_ids":["https://openalex.org/I170239107"],"apc_list":{"value":1570,"currency":"GBP","value_usd":1925},"apc_paid":{"value":1570,"currency":"GBP","value_usd":1925},"fwci":1.8595,"has_fulltext":false,"cited_by_count":30,"citation_normalized_percentile":{"value":0.83422785,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"17","issue":"S1","first_page":"7","last_page":"7"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.8126000165939331,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.8126000165939331,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.0340999998152256,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.021299999207258224,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.788112461566925},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7859460711479187},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6261310577392578},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.5426936149597168},{"id":"https://openalex.org/keywords/messenger-rna","display_name":"Messenger RNA","score":0.5363003611564636},{"id":"https://openalex.org/keywords/gene-regulatory-network","display_name":"Gene regulatory network","score":0.521872878074646},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5016129016876221},{"id":"https://openalex.org/keywords/regulation-of-gene-expression","display_name":"Regulation of gene expression","score":0.4699659049510956},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.4579448103904724},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.44948866963386536},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4488869905471802},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3482567071914673}],"concepts":[{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.788112461566925},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7859460711479187},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6261310577392578},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.5426936149597168},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.5363003611564636},{"id":"https://openalex.org/C67339327","wikidata":"https://www.wikidata.org/wiki/Q1502576","display_name":"Gene regulatory network","level":4,"score":0.521872878074646},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5016129016876221},{"id":"https://openalex.org/C165864922","wikidata":"https://www.wikidata.org/wiki/Q411391","display_name":"Regulation of gene expression","level":3,"score":0.4699659049510956},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.4579448103904724},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.44948866963386536},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4488869905471802},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3482567071914673},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059467","descriptor_name":"Transcriptome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12864-015-2300-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12864-015-2300-z","pdf_url":null,"source":{"id":"https://openalex.org/S28614077","display_name":"BMC Genomics","issn_l":"1471-2164","issn":["1471-2164"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"journal-article"},{"id":"pmid:26817421","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26817421","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC genomics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4895272","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4895272","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Genomics","raw_type":"Text"},{"id":"pmh:oai:urm_publish:9916018399701831","is_oa":true,"landing_page_url":"https://hdl.handle.net/11541.2/117130","pdf_url":null,"source":{"id":"https://openalex.org/S4306402528","display_name":"UniSA Research Outputs Repository (University of South Australia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I170239107","host_organization_name":"University of South Australia","host_organization_lineage":["https://openalex.org/I170239107"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"}],"best_oa_location":{"id":"doi:10.1186/s12864-015-2300-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12864-015-2300-z","pdf_url":null,"source":{"id":"https://openalex.org/S28614077","display_name":"BMC Genomics","issn_l":"1471-2164","issn":["1471-2164"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Genomics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.4699999988079071,"display_name":"Partnerships for the goals"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320334704","display_name":"Australian Research Council","ror":"https://ror.org/05mmh0f86"},{"id":"https://openalex.org/F4320337380","display_name":"Division of Mathematical Sciences","ror":"https://ror.org/051fftw81"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":67,"referenced_works":["https://openalex.org/W14098964","https://openalex.org/W144423133","https://openalex.org/W169978935","https://openalex.org/W1272986730","https://openalex.org/W1499327876","https://openalex.org/W1648301895","https://openalex.org/W1877170500","https://openalex.org/W1880262756","https://openalex.org/W1972785590","https://openalex.org/W1978697868","https://openalex.org/W1986903527","https://openalex.org/W2002995168","https://openalex.org/W2014946489","https://openalex.org/W2016106370","https://openalex.org/W2016343623","https://openalex.org/W2020842694","https://openalex.org/W2024011706","https://openalex.org/W2025183726","https://openalex.org/W2025341678","https://openalex.org/W2026570544","https://openalex.org/W2080551186","https://openalex.org/W2081076969","https://openalex.org/W2082565035","https://openalex.org/W2083381199","https://openalex.org/W2089772680","https://openalex.org/W2092113020","https://openalex.org/W2101117089","https://openalex.org/W2108668859","https://openalex.org/W2109154616","https://openalex.org/W2109761160","https://openalex.org/W2111209092","https://openalex.org/W2113942490","https://openalex.org/W2116350082","https://openalex.org/W2120211068","https://openalex.org/W2124756133","https://openalex.org/W2125879257","https://openalex.org/W2130979840","https://openalex.org/W2132939465","https://openalex.org/W2133658633","https://openalex.org/W2134118500","https://openalex.org/W2135046866","https://openalex.org/W2135613885","https://openalex.org/W2136943892","https://openalex.org/W2139992910","https://openalex.org/W2140124448","https://openalex.org/W2142663409","https://openalex.org/W2142890842","https://openalex.org/W2143207688","https://openalex.org/W2143693563","https://openalex.org/W2145937040","https://openalex.org/W2153195747","https://openalex.org/W2158806109","https://openalex.org/W2159482845","https://openalex.org/W2162674813","https://openalex.org/W2164483929","https://openalex.org/W2165700458","https://openalex.org/W2596701210","https://openalex.org/W2597632520","https://openalex.org/W2737184189","https://openalex.org/W2915108429","https://openalex.org/W3103971085","https://openalex.org/W3145571634","https://openalex.org/W3146360245","https://openalex.org/W4237723258","https://openalex.org/W4294216483","https://openalex.org/W6639619044","https://openalex.org/W6655670753"],"related_works":["https://openalex.org/W2128583238","https://openalex.org/W2134405083","https://openalex.org/W2049907435","https://openalex.org/W2010571965","https://openalex.org/W2034377088","https://openalex.org/W3128451840","https://openalex.org/W2002709996","https://openalex.org/W4387092964","https://openalex.org/W2103471012","https://openalex.org/W2966064480"],"abstract_inverted_index":{"BACKGROUND:":[0],"microRNAs":[1],"(miRNAs)":[2],"play":[3],"an":[4,158],"essential":[5],"role":[6],"in":[7,12,37,119,307],"the":[8,105,114,120,141,147,169,177,183,187,192,205,223,226,243,253,266,272,280,289,298,305,308,315,319,327],"post-transcriptional":[9],"gene":[10,38,72,261],"regulation":[11,73],"plants":[13],"and":[14,33,48,62,64,74,113,135,189,199,209,235,242,264,336],"animals.":[15],"They":[16],"regulate":[17],"a":[18,90,109,130,276],"wide":[19],"range":[20],"of":[21,46,50,111,116,122,171,186,194,207,211,225,232,271,279,318],"biological":[22,316],"processes":[23],"by":[24,284,304,330],"targeting":[25],"messenger":[26],"RNAs":[27],"(mRNAs).":[28],"Evidence":[29],"suggests":[30],"that":[31,275,297,301,326],"miRNAs":[32,47,61,112,188,208,306],"mRNAs":[34,51,118,190,198,212,300],"interact":[35],"collectively":[36],"regulatory":[39,86,96,138,165,281],"networks.":[40],"The":[41,180],"collective":[42,106,148,172,227],"relationships":[43,107,139,174,282],"between":[44,59,108,229],"groups":[45,49,206,210],"may":[52],"be":[53],"more":[54,333],"readily":[55],"interpreted":[56],"than":[57],"those":[58],"individual":[60],"mRNAs,":[63],"thus":[65],"are":[66,250,302,311,332],"useful":[67],"for":[68,162],"gaining":[69],"insight":[70],"into":[71],"cell":[75],"functions.":[76],"Several":[77],"computational":[78,160,178,267],"approaches":[79],"have":[80],"been":[81],"developed":[82],"to":[83,93,128,132,175,259,314],"discover":[84,133],"miRNA-mRNA":[85,95,137,164],"modules":[87],"(MMRMs)":[88],"with":[89,197,246,288],"common":[91],"aim":[92,126],"elucidate":[94],"relationships.":[97,149,166],"However,":[98],"most":[99],"existing":[100],"methods":[101],"do":[102],"not":[103],"consider":[104],"group":[110,115,155,173,234,237,244],"targeted":[117],"process":[121],"discovering":[123],"MMRMs.":[124,254],"Our":[125],"is":[127,286,295,323],"develop":[129],"framework":[131,161],"MMRMs":[134,310,328],"reveal":[136],"from":[140],"heterogeneous":[142],"expression":[143,262],"data":[144],"based":[145,214],"on":[146,191,215],"RESULTS:":[150],"We":[151,167,255],"propose":[152],"DIscovering":[153],"COllective":[154],"RElationships":[156],"(DICORE),":[157],"effective":[159],"revealing":[163],"utilize":[168],"notation":[170],"build":[176],"framework.":[179],"method":[181,258],"computes":[182],"collaboration":[184,218],"scores":[185],"basis":[193],"their":[195,216],"interactions":[196],"miRNAs,":[200],"respectively.":[201],"Then":[202],"it":[203,221,294],"determines":[204],"separately":[213],"respective":[217],"scores.":[219],"Next,":[220],"calculates":[222],"strength":[224],"relationship":[228],"each":[230],"pair":[231],"miRNA":[233],"mRNA":[236],"using":[238],"canonical":[239,248],"correlation":[240],"analysis,":[241],"pairs":[245],"significant":[247,335],"correlations":[249],"considered":[251],"as":[252],"applied":[256],"this":[257],"three":[260],"datasets,":[263],"validated":[265],"discoveries.":[268],"CONCLUSIONS:":[269],"Analysis":[270],"results":[273],"demonstrates":[274],"large":[277],"portion":[278],"discovered":[283],"DICORE":[285,331],"consistent":[287],"experimentally":[290],"confirmed":[291],"databases.":[292],"Furthermore,":[293],"observed":[296],"top":[299],"regulated":[303],"identified":[309,329],"highly":[312],"relevant":[313],"conditions":[317],"given":[320],"datasets.":[321],"It":[322],"also":[324],"shown":[325],"biologically":[334],"functionally":[337],"enriched.":[338]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":4},{"year":2020,"cited_by_count":10},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":4}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2016-06-24T00:00:00"}
