{"id":"https://openalex.org/W7162501575","doi":"https://doi.org/10.1186/s12859-026-06475-3","title":"MetaTree: an interactive web platform for aligned hierarchical data visualization and multi-group comparison","display_name":"MetaTree: an interactive web platform for aligned hierarchical data visualization and multi-group comparison","publication_year":2026,"publication_date":"2026-05-27","ids":{"openalex":"https://openalex.org/W7162501575","doi":"https://doi.org/10.1186/s12859-026-06475-3","pmid":"https://pubmed.ncbi.nlm.nih.gov/42204477"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-026-06475-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-026-06475-3","pdf_url":null,"source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1186/s12859-026-06475-3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5039050829","display_name":"Qing Wu","orcid":"https://orcid.org/0000-0002-0871-9840"},"institutions":[{"id":"https://openalex.org/I153718931","display_name":"University of Ottawa","ror":"https://ror.org/03c4mmv16","country_code":"CA","type":"education","lineage":["https://openalex.org/I153718931"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Qing Wu","raw_affiliation_strings":["Department of Biochemistry, Microbiology and Immunology, Faculty of Medicine, University of Ottawa, Ottawa, Canada","Faculty of Medicine, School of Pharmaceutical Sciences, University of Ottawa, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, Microbiology and Immunology, Faculty of Medicine, University of Ottawa, Ottawa, Canada","institution_ids":["https://openalex.org/I153718931"]},{"raw_affiliation_string":"Faculty of Medicine, School of Pharmaceutical Sciences, University of Ottawa, Ottawa, Canada","institution_ids":["https://openalex.org/I153718931"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052466934","display_name":"Ailing Zhang","orcid":"https://orcid.org/0000-0001-5204-6957"},"institutions":[{"id":"https://openalex.org/I153718931","display_name":"University of Ottawa","ror":"https://ror.org/03c4mmv16","country_code":"CA","type":"education","lineage":["https://openalex.org/I153718931"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Ailing Zhang","raw_affiliation_strings":["Department of Biochemistry, Microbiology and Immunology, Faculty of Medicine, University of Ottawa, Ottawa, Canada","Faculty of Medicine, School of Pharmaceutical Sciences, University of Ottawa, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, Microbiology and Immunology, Faculty of Medicine, University of Ottawa, Ottawa, Canada","institution_ids":["https://openalex.org/I153718931"]},{"raw_affiliation_string":"Faculty of Medicine, School of Pharmaceutical Sciences, University of Ottawa, Ottawa, Canada","institution_ids":["https://openalex.org/I153718931"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051417425","display_name":"Zhibin Ning","orcid":"https://orcid.org/0000-0003-2045-7596"},"institutions":[{"id":"https://openalex.org/I153718931","display_name":"University of Ottawa","ror":"https://ror.org/03c4mmv16","country_code":"CA","type":"education","lineage":["https://openalex.org/I153718931"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Zhibin Ning","raw_affiliation_strings":["Faculty of Medicine, School of Pharmaceutical Sciences, University of Ottawa, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Medicine, School of Pharmaceutical Sciences, University of Ottawa, Ottawa, Canada","institution_ids":["https://openalex.org/I153718931"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5135165377","display_name":"Daniel Figeys","orcid":null},"institutions":[{"id":"https://openalex.org/I1118541","display_name":"University of East Anglia","ror":"https://ror.org/026k5mg93","country_code":"GB","type":"education","lineage":["https://openalex.org/I1118541"]},{"id":"https://openalex.org/I153718931","display_name":"University of Ottawa","ror":"https://ror.org/03c4mmv16","country_code":"CA","type":"education","lineage":["https://openalex.org/I153718931"]},{"id":"https://openalex.org/I3018370718","display_name":"Quadram Institute","ror":"https://ror.org/04td3ys19","country_code":"GB","type":"facility","lineage":["https://openalex.org/I2799693246","https://openalex.org/I3018370718","https://openalex.org/I4210087105"]}],"countries":["CA","GB"],"is_corresponding":true,"raw_author_name":"Daniel Figeys","raw_affiliation_strings":["Faculty of Medicine, School of Pharmaceutical Sciences, University of Ottawa, Ottawa, Canada. daniel.figeys@quadram.ac.uk","Quadram Institute Bioscience, Norwich Research Park, Norwich, Norfolk, UK. daniel.figeys@quadram.ac.uk","University of East Anglia, Norwich, Norfolk, UK. daniel.figeys@quadram.ac.uk"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Medicine, School of Pharmaceutical Sciences, University of Ottawa, Ottawa, Canada. daniel.figeys@quadram.ac.uk","institution_ids":["https://openalex.org/I153718931"]},{"raw_affiliation_string":"Quadram Institute Bioscience, Norwich Research Park, Norwich, Norfolk, UK. daniel.figeys@quadram.ac.uk","institution_ids":["https://openalex.org/I3018370718"]},{"raw_affiliation_string":"University of East Anglia, Norwich, Norfolk, UK. daniel.figeys@quadram.ac.uk","institution_ids":["https://openalex.org/I1118541"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5135165377"],"corresponding_institution_ids":["https://openalex.org/I1118541","https://openalex.org/I153718931","https://openalex.org/I3018370718"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":{"value":2990,"currency":"USD","value_usd":2990},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.50779799,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"27","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.19449999928474426,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.19449999928474426,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.07810000330209732,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.06129999831318855,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.7264000177383423},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.6008999943733215},{"id":"https://openalex.org/keywords/usable","display_name":"USable","score":0.5444999933242798},{"id":"https://openalex.org/keywords/hierarchical-clustering","display_name":"Hierarchical clustering","score":0.5052000284194946},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.4918000102043152},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.49079999327659607},{"id":"https://openalex.org/keywords/interactive-visualization","display_name":"Interactive visualization","score":0.4422999918460846},{"id":"https://openalex.org/keywords/hierarchical-database-model","display_name":"Hierarchical database model","score":0.4185999929904938}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7739999890327454},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.7264000177383423},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.6008999943733215},{"id":"https://openalex.org/C2780615836","wikidata":"https://www.wikidata.org/wiki/Q2471869","display_name":"USable","level":2,"score":0.5444999933242798},{"id":"https://openalex.org/C92835128","wikidata":"https://www.wikidata.org/wiki/Q1277447","display_name":"Hierarchical clustering","level":3,"score":0.5052000284194946},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.4918000102043152},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.49079999327659607},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.45590001344680786},{"id":"https://openalex.org/C64073096","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Interactive visualization","level":3,"score":0.4422999918460846},{"id":"https://openalex.org/C144986985","wikidata":"https://www.wikidata.org/wiki/Q871236","display_name":"Hierarchical database model","level":2,"score":0.4185999929904938},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.40400001406669617},{"id":"https://openalex.org/C89505385","wikidata":"https://www.wikidata.org/wiki/Q47146","display_name":"User interface","level":2,"score":0.39079999923706055},{"id":"https://openalex.org/C62611344","wikidata":"https://www.wikidata.org/wiki/Q1062658","display_name":"Node (physics)","level":2,"score":0.36809998750686646},{"id":"https://openalex.org/C2780977526","wikidata":"https://www.wikidata.org/wiki/Q42417149","display_name":"Data exploration","level":3,"score":0.337799996137619},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.3319999873638153},{"id":"https://openalex.org/C99740376","wikidata":"https://www.wikidata.org/wiki/Q17092520","display_name":"Interactive visual analysis","level":4,"score":0.32260000705718994},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3179999887943268},{"id":"https://openalex.org/C142816647","wikidata":"https://www.wikidata.org/wiki/Q5573018","display_name":"Glyph (data visualization)","level":3,"score":0.30889999866485596},{"id":"https://openalex.org/C59732488","wikidata":"https://www.wikidata.org/wiki/Q2528440","display_name":"Visual analytics","level":3,"score":0.28769999742507935},{"id":"https://openalex.org/C2780217385","wikidata":"https://www.wikidata.org/wiki/Q2389284","display_name":"Hierarchical organization","level":2,"score":0.26409998536109924},{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.26170000433921814},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.25920000672340393},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.25459998846054077},{"id":"https://openalex.org/C124527596","wikidata":"https://www.wikidata.org/wiki/Q17029359","display_name":"Hierarchical control system","level":3,"score":0.2533999979496002},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.2513999938964844}],"mesh":[{"descriptor_ui":"D000078326","descriptor_name":"Data Visualization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000078326","descriptor_name":"Data Visualization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000078326","descriptor_name":"Data Visualization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-026-06475-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-026-06475-3","pdf_url":null,"source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:42204477","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/42204477","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:ueaeprints.uea.ac.uk:104032","is_oa":true,"landing_page_url":"https://ueaeprints.uea.ac.uk/id/eprint/104032/1/s12859-026-06475-3.pdf","pdf_url":"https://ueaeprints.uea.ac.uk/id/eprint/104032/1/s12859-026-06475-3.pdf","source":{"id":"https://openalex.org/S4306400384","display_name":"UEA Digital Repository (University of East Anglia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1118541","host_organization_name":"University of East Anglia","host_organization_lineage":["https://openalex.org/I1118541"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:13393875","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13393875/","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13393875/pdf/12859_2026_Article_6475.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:70b9961b644448d38cd754042db3ce14","is_oa":false,"landing_page_url":"https://doaj.org/article/70b9961b644448d38cd754042db3ce14","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 27, Iss 1 (2026)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s12859-026-06475-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-026-06475-3","pdf_url":null,"source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8402489293","display_name":null,"funder_award_id":"RGPIN-03905-2018","funder_id":"https://openalex.org/F4320334593","funder_display_name":"Natural Sciences and Engineering Research Council of Canada"}],"funders":[{"id":"https://openalex.org/F4320334593","display_name":"Natural Sciences and Engineering Research Council of Canada","ror":"https://ror.org/01h531d29"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":28,"referenced_works":["https://openalex.org/W1883997870","https://openalex.org/W1972978214","https://openalex.org/W2052639391","https://openalex.org/W2056279562","https://openalex.org/W2072970694","https://openalex.org/W2085926377","https://openalex.org/W2087610532","https://openalex.org/W2103017472","https://openalex.org/W2110065044","https://openalex.org/W2130731460","https://openalex.org/W2135415614","https://openalex.org/W2277953252","https://openalex.org/W2510766756","https://openalex.org/W2513727910","https://openalex.org/W2754579667","https://openalex.org/W2889019390","https://openalex.org/W2949239325","https://openalex.org/W2993894543","https://openalex.org/W3121804420","https://openalex.org/W3214361435","https://openalex.org/W4249468678","https://openalex.org/W4318955149","https://openalex.org/W4376132442","https://openalex.org/W4391536386","https://openalex.org/W4394785938","https://openalex.org/W4403479110","https://openalex.org/W4410030337","https://openalex.org/W4417159765"],"related_works":[],"abstract_inverted_index":{"BACKGROUND:":[0],"Hierarchical":[1],"quantitative":[2,67],"profiles":[3],"are":[4],"widely":[5],"used":[6],"in":[7,55,93,131],"microbiome":[8,210],"studies":[9],"and":[10,17,62,73,128,147,157,173,189,198,211],"other":[11,212],"domains.":[12],"However,":[13],"comparing":[14],"multiple":[15],"samples":[16],"experimental":[18],"groups":[19,76,111],"while":[20],"preserving":[21,82],"hierarchical":[22,66,132,192,213],"structure":[23],"remains":[24,162],"challenging.":[25],"Many":[26],"existing":[27],"workflows":[28],"require":[29],"extensive":[30],"manual":[31],"figure":[32],"assembly":[33],"or":[34],"do":[35],"not":[36],"support":[37],"aligned":[38],"comparisons":[39,108],"across":[40,97],"conditions":[41,127],"on":[42],"a":[43,56,78],"shared":[44,79],"hierarchy.":[45],"RESULTS:":[46],"We":[47],"developed":[48],"MetaTree,":[49],"an":[50,179],"open-source":[51],"platform":[52,182],"that":[53,87],"runs":[54],"web":[57,181],"browser":[58],"for":[59,107,140,164,186,209],"interactive":[60,168],"visualization":[61,188],"comparative":[63],"analysis":[64],"of":[65,191,206],"data.":[68],"MetaTree":[69,103,134,177],"anchors":[70],"samples,":[71],"groups,":[72],"contrasts":[74],"between":[75,109,126],"to":[77,101,120,151,154,202],"reference":[80],"hierarchy,":[81],"one-to-one":[83],"node":[84],"correspondence":[85],"so":[86],"the":[88,94],"same":[89,95],"clade":[90],"is":[91,178],"compared":[92],"position":[96],"views.":[98],"In":[99],"addition":[100],"visualization,":[102],"integrates":[104],"statistical":[105],"testing":[106],"two":[110],"with":[112,123],"false":[113],"discovery":[114],"rate":[115],"(FDR)":[116],"control,":[117],"enabling":[118],"users":[119],"identify":[121],"clades":[122],"consistent":[124],"differences":[125],"interpret":[129],"them":[130],"context.":[133],"also":[135],"provides":[136],"user":[137],"configurable":[138],"controls":[139],"visual":[141],"encoding,":[142],"filtering":[143],"thresholds,":[144],"label":[145,171],"density,":[146],"layout,":[148],"allowing":[149],"figures":[150,208],"be":[152],"adapted":[153],"different":[155],"datasets":[156],"reporting":[158],"needs.":[159],"The":[160],"interface":[161],"usable":[163],"large":[165],"hierarchies":[166],"through":[167],"navigation,":[169],"adaptive":[170],"handling,":[172],"branch":[174],"collapsing.":[175],"CONCLUSIONS:":[176],"installation-free":[180],"(":[183],"https://byemaxx.github.io/MetaTree":[184],")":[185],"topology-consistent":[187],"comparison":[190,200],"profiles,":[193],"supporting":[194],"coordinated":[195],"multi-panel":[196],"exploration":[197],"automated":[199],"matrices":[201],"enable":[203],"rapid":[204],"generation":[205],"publication-ready":[207],"datasets.":[214]},"counts_by_year":[],"updated_date":"2026-08-23T07:36:19.812096","created_date":"2026-05-28T00:00:00"}
