{"id":"https://openalex.org/W7140871406","doi":"https://doi.org/10.1186/s12859-026-06428-w","title":"RCDRank: a web server to prioritize regulated cell death modalities","display_name":"RCDRank: a web server to prioritize regulated cell death modalities","publication_year":2026,"publication_date":"2026-03-26","ids":{"openalex":"https://openalex.org/W7140871406","doi":"https://doi.org/10.1186/s12859-026-06428-w","pmid":"https://pubmed.ncbi.nlm.nih.gov/41888645"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-026-06428-w","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-026-06428-w","pdf_url":null,"source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1186/s12859-026-06428-w","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5130649724","display_name":"Nan Zhou","orcid":null},"institutions":[{"id":"https://openalex.org/I92039509","display_name":"Guangzhou Medical University","ror":"https://ror.org/00zat6v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I92039509"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Nan Zhou","raw_affiliation_strings":["Research Center, The Affiliated Brain Hospital, Guangzhou Medical University, Guangzhou, 510370, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Center, The Affiliated Brain Hospital, Guangzhou Medical University, Guangzhou, 510370, China","institution_ids":["https://openalex.org/I92039509"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100537611","display_name":"Tong Yin","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210097354","display_name":"Sun Yat-sen Memorial Hospital","ror":"https://ror.org/01px77p81","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210097354"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tong Yin","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China","Medical Research Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China","institution_ids":["https://openalex.org/I4210097354","https://openalex.org/I157773358"]},{"raw_affiliation_string":"Medical Research Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China","institution_ids":["https://openalex.org/I4210097354","https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102685003","display_name":"Huiran Sun","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210097354","display_name":"Sun Yat-sen Memorial Hospital","ror":"https://ror.org/01px77p81","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210097354"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huiran Sun","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China","Medical Research Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China","institution_ids":["https://openalex.org/I4210097354","https://openalex.org/I157773358"]},{"raw_affiliation_string":"Medical Research Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China","institution_ids":["https://openalex.org/I4210097354","https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101662098","display_name":"Qiqi Luo","orcid":"https://orcid.org/0000-0002-1438-6157"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiqi Luo","raw_affiliation_strings":["College of Life Science, Sichuan University, Chengdu, 610064, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Life Science, Sichuan University, Chengdu, 610064, China","institution_ids":["https://openalex.org/I24185976"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110827204","display_name":"Yuhong Zhang","orcid":"https://orcid.org/0000-0003-4230-5868"},"institutions":[{"id":"https://openalex.org/I92039509","display_name":"Guangzhou Medical University","ror":"https://ror.org/00zat6v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I92039509"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuhong Zhang","raw_affiliation_strings":["Research Center, The Affiliated Brain Hospital, Guangzhou Medical University, Guangzhou, 510370, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Center, The Affiliated Brain Hospital, Guangzhou Medical University, Guangzhou, 510370, China","institution_ids":["https://openalex.org/I92039509"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101994394","display_name":"Xiaolei Shi","orcid":"https://orcid.org/0000-0003-3707-6618"},"institutions":[{"id":"https://openalex.org/I92039509","display_name":"Guangzhou Medical University","ror":"https://ror.org/00zat6v61","country_code":"CN","type":"education","lineage":["https://openalex.org/I92039509"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaolei Shi","raw_affiliation_strings":["Research Center, The Affiliated Brain Hospital, Guangzhou Medical University, Guangzhou, 510370, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Research Center, The Affiliated Brain Hospital, Guangzhou Medical University, Guangzhou, 510370, China","institution_ids":["https://openalex.org/I92039509"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074424457","display_name":"Ji Bao","orcid":"https://orcid.org/0000-0001-8413-3270"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jinku Bao","raw_affiliation_strings":["College of Life Science, Sichuan University, Chengdu, 610064, China. baojinku@scu.edu.cn"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Life Science, Sichuan University, Chengdu, 610064, China. baojinku@scu.edu.cn","institution_ids":["https://openalex.org/I24185976"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5130710471","display_name":"Li Peng","orcid":null},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210097354","display_name":"Sun Yat-sen Memorial Hospital","ror":"https://ror.org/01px77p81","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210097354"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Li Peng","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China. pengli9@mail.sysu.edu.cn","Medical Research Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China. pengli9@mail.sysu.edu.cn"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China. pengli9@mail.sysu.edu.cn","institution_ids":["https://openalex.org/I4210097354","https://openalex.org/I157773358"]},{"raw_affiliation_string":"Medical Research Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China. pengli9@mail.sysu.edu.cn","institution_ids":["https://openalex.org/I4210097354","https://openalex.org/I157773358"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5034690303","display_name":"Xi Yuan","orcid":"https://orcid.org/0000-0001-9328-7140"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I4210097354","display_name":"Sun Yat-sen Memorial Hospital","ror":"https://ror.org/01px77p81","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210097354"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiaoqing Yuan","raw_affiliation_strings":["Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China. yuanxq7@mail.sysu.edu.cn","Medical Research Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China. yuanxq7@mail.sysu.edu.cn"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangdong Provincial Key Laboratory of Malignant Tumor Epigenetics and Gene Regulation, Guangdong-Hong Kong Joint Laboratory for RNA Medicine, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China. yuanxq7@mail.sysu.edu.cn","institution_ids":["https://openalex.org/I4210097354","https://openalex.org/I157773358"]},{"raw_affiliation_string":"Medical Research Center, Sun Yat-Sen Memorial Hospital, Sun Yat-Sen University, Guangzhou, 510120, China. yuanxq7@mail.sysu.edu.cn","institution_ids":["https://openalex.org/I4210097354","https://openalex.org/I157773358"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5034690303"],"corresponding_institution_ids":["https://openalex.org/I157773358","https://openalex.org/I4210097354"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":8.658,"has_fulltext":false,"cited_by_count":1,"citation_normalized_percentile":{"value":0.96951474,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":98},"biblio":{"volume":"27","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11266","display_name":"Neuroinflammation and Neurodegeneration Mechanisms","score":0.6183000206947327,"subfield":{"id":"https://openalex.org/subfields/2808","display_name":"Neurology"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11266","display_name":"Neuroinflammation and Neurodegeneration Mechanisms","score":0.6183000206947327,"subfield":{"id":"https://openalex.org/subfields/2808","display_name":"Neurology"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.06499999761581421,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10294","display_name":"Cell death mechanisms and regulation","score":0.05000000074505806,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/modalities","display_name":"Modalities","score":0.7591000199317932},{"id":"https://openalex.org/keywords/crosstalk","display_name":"Crosstalk","score":0.6310999989509583},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4505000114440918},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.42089998722076416},{"id":"https://openalex.org/keywords/modality","display_name":"Modality (human\u2013computer interaction)","score":0.3874000012874603},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.3783000111579895},{"id":"https://openalex.org/keywords/variety","display_name":"Variety (cybernetics)","score":0.36809998750686646}],"concepts":[{"id":"https://openalex.org/C2779903281","wikidata":"https://www.wikidata.org/wiki/Q6888026","display_name":"Modalities","level":2,"score":0.7591000199317932},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6524999737739563},{"id":"https://openalex.org/C169822122","wikidata":"https://www.wikidata.org/wiki/Q230187","display_name":"Crosstalk","level":2,"score":0.6310999989509583},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4505000114440918},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.42089998722076416},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3921999931335449},{"id":"https://openalex.org/C2780226545","wikidata":"https://www.wikidata.org/wiki/Q6888030","display_name":"Modality (human\u2013computer interaction)","level":2,"score":0.3874000012874603},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.3783000111579895},{"id":"https://openalex.org/C136197465","wikidata":"https://www.wikidata.org/wiki/Q1729295","display_name":"Variety (cybernetics)","level":2,"score":0.36809998750686646},{"id":"https://openalex.org/C189014844","wikidata":"https://www.wikidata.org/wiki/Q189118","display_name":"Cell type","level":3,"score":0.36500000953674316},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.34299999475479126},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.32600000500679016},{"id":"https://openalex.org/C2776291640","wikidata":"https://www.wikidata.org/wiki/Q2912517","display_name":"Value (mathematics)","level":2,"score":0.32260000705718994},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3070000112056732},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.29409998655319214},{"id":"https://openalex.org/C3019692148","wikidata":"https://www.wikidata.org/wiki/Q186005","display_name":"Therapeutic modalities","level":2,"score":0.2854999899864197},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.2565999925136566},{"id":"https://openalex.org/C62177273","wikidata":"https://www.wikidata.org/wiki/Q5531556","display_name":"Gene nomenclature","level":4,"score":0.25360000133514404}],"mesh":[{"descriptor_ui":"D000079404","descriptor_name":"Regulated Cell Death","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000079404","descriptor_name":"Regulated Cell Death","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D000079404","descriptor_name":"Regulated Cell Death","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-026-06428-w","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-026-06428-w","pdf_url":null,"source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:41888645","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41888645","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:ae52c18b5c384a8d8408d04015eaaac7","is_oa":true,"landing_page_url":"https://doaj.org/article/ae52c18b5c384a8d8408d04015eaaac7","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 27, Iss 1 (2026)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:13141446","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC13141446/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-026-06428-w","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-026-06428-w","pdf_url":null,"source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":46,"referenced_works":["https://openalex.org/W161836838","https://openalex.org/W1997128330","https://openalex.org/W2017469718","https://openalex.org/W2042141743","https://openalex.org/W2130410032","https://openalex.org/W2133465414","https://openalex.org/W2322916393","https://openalex.org/W2331898099","https://openalex.org/W2737838117","https://openalex.org/W2788640168","https://openalex.org/W2889418962","https://openalex.org/W2904930228","https://openalex.org/W2935369648","https://openalex.org/W2949093503","https://openalex.org/W2991204446","https://openalex.org/W3013967177","https://openalex.org/W3045978970","https://openalex.org/W3145969289","https://openalex.org/W4220684489","https://openalex.org/W4221112855","https://openalex.org/W4221115671","https://openalex.org/W4283275596","https://openalex.org/W4294557413","https://openalex.org/W4304889790","https://openalex.org/W4307468169","https://openalex.org/W4309944312","https://openalex.org/W4319310752","https://openalex.org/W4319322340","https://openalex.org/W4323036511","https://openalex.org/W4360612283","https://openalex.org/W4385580902","https://openalex.org/W4386098083","https://openalex.org/W4388539829","https://openalex.org/W4388591519","https://openalex.org/W4388769584","https://openalex.org/W4393235835","https://openalex.org/W4399805503","https://openalex.org/W4399978703","https://openalex.org/W4403180072","https://openalex.org/W4403479110","https://openalex.org/W4403787064","https://openalex.org/W4407003623","https://openalex.org/W4409249871","https://openalex.org/W4409772670","https://openalex.org/W4415757414","https://openalex.org/W4416039089"],"related_works":[],"abstract_inverted_index":{"BACKGROUND:":[0],"Regulated":[1],"cell":[2,37,78,84],"death":[3,38],"(RCD)":[4],"maintains":[5],"cellular":[6,135],"homeostasis":[7],"and":[8,18,33,61,213],"tissue":[9],"integrity,":[10],"playing":[11],"a":[12,145,237,250],"pivotal":[13],"role":[14],"in":[15,43,51,133,233,258],"both":[16,208],"health":[17],"disease.":[19],"A":[20],"variety":[21],"of":[22,68,94,97,109,122,130,149,162,170,185,201,219],"RCD":[23,69,95,111,131,155,164,189,202,231,256],"subroutines":[24],"have":[25],"been":[26],"identified,":[27],"each":[28,163,188],"characterized":[29],"by":[30,166,206,225],"distinct":[31],"molecular":[32],"morphological":[34],"features.":[35],"These":[36],"modalities":[39,112,257],"do":[40],"not":[41],"operate":[42],"isolation.":[44],"Instead,":[45],"they":[46],"interact":[47],"with":[48],"one":[49],"another":[50],"complex":[52],"ways.":[53],"This":[54,118],"interaction":[55],"leads":[56],"to":[57,104,125,228,253],"crosstalk":[58],"through":[59],"interconnected":[60],"often":[62],"overlapping":[63],"signaling":[64],"pathways.":[65],"Multiple":[66],"forms":[67],"can":[70],"coexist":[71],"within":[72,113],"the":[73,82,91,106,114,120,128,139,160,168,177,183,209,214,220,230],"same":[74,83],"disease,":[75],"influencing":[76],"various":[77,110,134],"types":[79],"or":[80,88],"even":[81],"type":[85],"either":[86],"synchronously":[87],"sequentially.":[89],"Understanding":[90],"intricate":[92],"dynamics":[93],"is":[96,102,265],"high":[98],"importance.":[99],"However,":[100],"it":[101,227],"challenging":[103],"discern":[105],"relative":[107],"contribution":[108],"specific":[115,259],"biological":[116,260],"context.":[117],"necessitates":[119],"development":[121],"advanced":[123],"methodologies":[124],"systematically":[126],"analyze":[127],"priority":[129],"pathways":[132],"environments.":[136],"MAIN:":[137],"In":[138],"present":[140],"study,":[141],"we":[142],"first":[143],"created":[144,242],"manually":[146],"curated":[147],"collection":[148],"gene":[150,172],"sets":[151],"for":[152,187,243],"18":[153],"well-characterized":[154],"modes.":[156],"We":[157],"then":[158],"estimated":[159],"significance":[161],"pathway":[165,190],"combining":[167],"results":[169],"seven":[171],"set":[173],"enrichment":[174,186],"tests":[175,192],"via":[176],"Tippet":[178],"p-value":[179],"combination":[180],"approach.":[181],"Afterward,":[182],"consensus":[184,215],"across":[191],"was":[193,223,241],"evaluated":[194],"using":[195],"robust":[196],"rank":[197],"aggregation.":[198],"The":[199,217,262],"priorities":[200],"were":[203],"subsequently":[204],"resolved":[205],"considering":[207],"combined":[210],"p":[211],"value":[212],"score.":[216],"reliability":[218],"proposed":[221],"approach":[222],"validated":[224],"applying":[226],"explore":[229],"modes":[232],"intracranial":[234],"aneurysms.":[235],"Finally,":[236],"user-friendly":[238],"web":[239,263],"application":[240],"researchers":[244],"worldwide.":[245],"CONCLUSION:":[246],"Our":[247],"study":[248],"offers":[249],"new":[251],"way":[252],"reveal":[254],"complicated":[255],"settings.":[261],"server":[264],"freely":[266],"accessible":[267],"at":[268],"https://www.zhounan.org/rcdrank.":[269]},"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-06-22T08:00:12.763002","created_date":"2026-03-27T00:00:00"}
