{"id":"https://openalex.org/W4414545324","doi":"https://doi.org/10.1186/s12859-025-06199-w","title":"Structure-sensitive transformer and multi-view graph contrastive learning enhanced prediction of drug-related microbes","display_name":"Structure-sensitive transformer and multi-view graph contrastive learning enhanced prediction of drug-related microbes","publication_year":2025,"publication_date":"2025-09-26","ids":{"openalex":"https://openalex.org/W4414545324","doi":"https://doi.org/10.1186/s12859-025-06199-w","pmid":"https://pubmed.ncbi.nlm.nih.gov/41013188"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-025-06199-w","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-025-06199-w","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-025-06199-w","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-025-06199-w","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5028616130","display_name":"Ping Xuan","orcid":"https://orcid.org/0000-0001-5328-691X"},"institutions":[{"id":"https://openalex.org/I20942203","display_name":"Hainan University","ror":"https://ror.org/03q648j11","country_code":"CN","type":"education","lineage":["https://openalex.org/I20942203"]},{"id":"https://openalex.org/I32574673","display_name":"Shantou University","ror":"https://ror.org/01a099706","country_code":"CN","type":"education","lineage":["https://openalex.org/I32574673"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Ping Xuan","raw_affiliation_strings":["Department of Computer Science and Technology, Shantou University, Shantou, 515063, China","School of Cyberspace Security, Hainan University, Haikou, 570228, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, Shantou University, Shantou, 515063, China","institution_ids":["https://openalex.org/I32574673"]},{"raw_affiliation_string":"School of Cyberspace Security, Hainan University, Haikou, 570228, China","institution_ids":["https://openalex.org/I20942203"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100431163","display_name":"Rui Wang","orcid":"https://orcid.org/0000-0001-9048-2979"},"institutions":[{"id":"https://openalex.org/I32574673","display_name":"Shantou University","ror":"https://ror.org/01a099706","country_code":"CN","type":"education","lineage":["https://openalex.org/I32574673"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rui Wang","raw_affiliation_strings":["Department of Computer Science and Technology, Shantou University, Shantou, 515063, China"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, Shantou University, Shantou, 515063, China","institution_ids":["https://openalex.org/I32574673"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072908486","display_name":"Jing Gu","orcid":"https://orcid.org/0009-0003-1172-9454"},"institutions":[{"id":"https://openalex.org/I1300757298","display_name":"Heilongjiang University of Science and Technology","ror":"https://ror.org/030xwyx96","country_code":"CN","type":"education","lineage":["https://openalex.org/I1300757298"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jing Gu","raw_affiliation_strings":["School of Computer Science and Technology, Heilongjiang University, Harbin, 150080, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Heilongjiang University, Harbin, 150080, China","institution_ids":["https://openalex.org/I1300757298"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004971220","display_name":"Hui Cui","orcid":"https://orcid.org/0000-0001-8224-4698"},"institutions":[{"id":"https://openalex.org/I196829312","display_name":"La Trobe University","ror":"https://ror.org/01rxfrp27","country_code":"AU","type":"education","lineage":["https://openalex.org/I196829312"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Hui Cui","raw_affiliation_strings":["Department of Computer Science and Information Technology, La Trobe University, Melbourne, 3083, Australia"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Information Technology, La Trobe University, Melbourne, 3083, Australia","institution_ids":["https://openalex.org/I196829312"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5004963500","display_name":"Tiangang Zhang","orcid":"https://orcid.org/0000-0002-7528-3581"},"institutions":[{"id":"https://openalex.org/I1300757298","display_name":"Heilongjiang University of Science and Technology","ror":"https://ror.org/030xwyx96","country_code":"CN","type":"education","lineage":["https://openalex.org/I1300757298"]},{"id":"https://openalex.org/I20942203","display_name":"Hainan University","ror":"https://ror.org/03q648j11","country_code":"CN","type":"education","lineage":["https://openalex.org/I20942203"]},{"id":"https://openalex.org/I55022517","display_name":"Heilongjiang University","ror":"https://ror.org/04zyhq975","country_code":"CN","type":"education","lineage":["https://openalex.org/I55022517"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tiangang Zhang","raw_affiliation_strings":["School of Computer Science and Technology, Heilongjiang University, Harbin, 150080, China. zhang@hlju.edu.cn","School of Cyberspace Security, Hainan University, Haikou, 570228, China. zhang@hlju.edu.cn","School of Cyberspace Security, Hainan University, Haikou, 570228, China","School of Computer Science and Technology, Heilongjiang University, Harbin, 150080, China"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Heilongjiang University, Harbin, 150080, China. zhang@hlju.edu.cn","institution_ids":["https://openalex.org/I1300757298","https://openalex.org/I55022517"]},{"raw_affiliation_string":"School of Cyberspace Security, Hainan University, Haikou, 570228, China. zhang@hlju.edu.cn","institution_ids":["https://openalex.org/I20942203"]},{"raw_affiliation_string":"School of Cyberspace Security, Hainan University, Haikou, 570228, China","institution_ids":["https://openalex.org/I20942203"]},{"raw_affiliation_string":"School of Computer Science and Technology, Heilongjiang University, Harbin, 150080, China","institution_ids":["https://openalex.org/I1300757298"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5028616130"],"corresponding_institution_ids":["https://openalex.org/I20942203","https://openalex.org/I32574673"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.3746,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.86139018,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":96,"max":98},"biblio":{"volume":"26","issue":"1","first_page":"231","last_page":"231"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9882000088691711,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/transformer","display_name":"Transformer","score":0.5249000191688538},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.45350000262260437},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.44909998774528503},{"id":"https://openalex.org/keywords/feature-learning","display_name":"Feature learning","score":0.4068000018596649},{"id":"https://openalex.org/keywords/node","display_name":"Node (physics)","score":0.37040001153945923},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.3580000102519989}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7310000061988831},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5827999711036682},{"id":"https://openalex.org/C66322947","wikidata":"https://www.wikidata.org/wiki/Q11658","display_name":"Transformer","level":3,"score":0.5249000191688538},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.45350000262260437},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.44909998774528503},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.40799999237060547},{"id":"https://openalex.org/C59404180","wikidata":"https://www.wikidata.org/wiki/Q17013334","display_name":"Feature learning","level":2,"score":0.4068000018596649},{"id":"https://openalex.org/C62611344","wikidata":"https://www.wikidata.org/wiki/Q1062658","display_name":"Node (physics)","level":2,"score":0.37040001153945923},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3596000075340271},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.3580000102519989},{"id":"https://openalex.org/C52622490","wikidata":"https://www.wikidata.org/wiki/Q1026626","display_name":"Feature extraction","level":2,"score":0.33169999718666077},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3264000117778778},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.30149999260902405},{"id":"https://openalex.org/C2777629044","wikidata":"https://www.wikidata.org/wiki/Q614959","display_name":"Contrastive analysis","level":2,"score":0.2513999938964844}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-025-06199-w","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-025-06199-w","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-025-06199-w","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:41013188","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/41013188","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:27896cb4289542cbb66562690b78bc2f","is_oa":true,"landing_page_url":"https://doaj.org/article/27896cb4289542cbb66562690b78bc2f","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 26, Iss 1, Pp 1-21 (2025)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:11273530","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12465207","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:12465207","is_oa":true,"landing_page_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC12465207/","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-025-06199-w","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-025-06199-w","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-025-06199-w","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1241282025","display_name":null,"funder_award_id":"62372282, 62172143","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1477544716","display_name":null,"funder_award_id":"Guangdong","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2476221792","display_name":null,"funder_award_id":"Heilongjiang","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G37568934","display_name":null,"funder_award_id":"Grant","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3921087684","display_name":null,"funder_award_id":"2024A1515010176","funder_id":"https://openalex.org/F4320337111","funder_display_name":"Basic and Applied Basic Research Foundation of Guangdong Province"},{"id":"https://openalex.org/G4429004793","display_name":null,"funder_award_id":"62172143","funder_id":"https://openalex.org/F4320323085","funder_display_name":"Natural Science Foundation of Heilongjiang Province"},{"id":"https://openalex.org/G4685021066","display_name":null,"funder_award_id":"62372282","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6259686466","display_name":null,"funder_award_id":"62172143","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6550985696","display_name":null,"funder_award_id":"51501017","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6559325049","display_name":null,"funder_award_id":"LH2023F044","funder_id":"https://openalex.org/F4320323085","funder_display_name":"Natural Science Foundation of Heilongjiang Province"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320323085","display_name":"Natural Science Foundation of Heilongjiang Province","ror":null},{"id":"https://openalex.org/F4320337111","display_name":"Basic and Applied Basic Research Foundation of Guangdong Province","ror":null}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4414545324.pdf"},"referenced_works_count":46,"referenced_works":["https://openalex.org/W1966716734","https://openalex.org/W2063361228","https://openalex.org/W2063861000","https://openalex.org/W2087007556","https://openalex.org/W2096451472","https://openalex.org/W2114605673","https://openalex.org/W2120320281","https://openalex.org/W2127276530","https://openalex.org/W2128769815","https://openalex.org/W2583889943","https://openalex.org/W2588858044","https://openalex.org/W2598050964","https://openalex.org/W2769934873","https://openalex.org/W2784989009","https://openalex.org/W2896473060","https://openalex.org/W2903096015","https://openalex.org/W2922405516","https://openalex.org/W2923656972","https://openalex.org/W2948160364","https://openalex.org/W3021655209","https://openalex.org/W3030942202","https://openalex.org/W3037489518","https://openalex.org/W3039075121","https://openalex.org/W3100993589","https://openalex.org/W3116604690","https://openalex.org/W3178147479","https://openalex.org/W3192677404","https://openalex.org/W3201821663","https://openalex.org/W4225141622","https://openalex.org/W4281871249","https://openalex.org/W4292723103","https://openalex.org/W4295874962","https://openalex.org/W4307272930","https://openalex.org/W4309467503","https://openalex.org/W4312084649","https://openalex.org/W4318539234","https://openalex.org/W4319993301","https://openalex.org/W4379932151","https://openalex.org/W4381051893","https://openalex.org/W4382198799","https://openalex.org/W4386295460","https://openalex.org/W4386530324","https://openalex.org/W4391970351","https://openalex.org/W4399247180","https://openalex.org/W4402585671","https://openalex.org/W4405837413"],"related_works":[],"abstract_inverted_index":{"The":[0,17,42],"extensive":[1],"experimental":[2],"results":[3],"show":[4,20],"that":[5],"SMMDA":[6],"outperforms":[7],"several":[8],"state-of-the-art":[9],"methods":[10],"for":[11,58],"predicting":[12],"the":[13,21,24,29,54,59],"drug-related":[14],"candidate":[15],"microbes.":[16],"ablation":[18],"studies":[19,44],"effectiveness":[22],"of":[23],"major":[25],"innovations":[26],"which":[27],"include":[28],"learnable":[30],"data":[31],"augmentation,":[32],"structure-sensitive":[33],"transformer-based":[34],"node":[35],"feature":[36],"learning,":[37],"and":[38],"multi-view":[39],"contrastive":[40],"learning.":[41],"case":[43],"on":[45],"three":[46],"drugs":[47],"also":[48],"demonstrate":[49],"SMMDA's":[50],"capability":[51],"in":[52],"retrieving":[53],"potential":[55],"microbe":[56],"candidates":[57],"drugs.":[60]},"counts_by_year":[{"year":2026,"cited_by_count":1}],"updated_date":"2026-04-16T08:26:57.006410","created_date":"2025-10-10T00:00:00"}