{"id":"https://openalex.org/W4412467904","doi":"https://doi.org/10.1186/s12859-025-06195-0","title":"SaeGraphDTI: drug\u2013target interaction prediction based on sequence attribute extraction and graph neural network","display_name":"SaeGraphDTI: drug\u2013target interaction prediction based on sequence attribute extraction and graph neural network","publication_year":2025,"publication_date":"2025-07-15","ids":{"openalex":"https://openalex.org/W4412467904","doi":"https://doi.org/10.1186/s12859-025-06195-0","pmid":"https://pubmed.ncbi.nlm.nih.gov/40670964"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-025-06195-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-025-06195-0","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-025-06195-0","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-025-06195-0","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5081325393","display_name":"Qiaosheng Zhang","orcid":"https://orcid.org/0000-0001-6114-8453"},"institutions":[{"id":"https://openalex.org/I2801481043","display_name":"Jiangsu Ocean University","ror":"https://ror.org/031zps173","country_code":"CN","type":"education","lineage":["https://openalex.org/I2801481043"]},{"id":"https://openalex.org/I4210153482","display_name":"Changzhou University","ror":"https://ror.org/04ymgwq66","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210153482"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiaosheng Zhang","raw_affiliation_strings":["Jiangsu Institute of Marine Resources Development, Jiangsu Ocean University, No. 59, Cangwu Road, Haizhou District, Lianyungang, 222000, Jiangsu, China. zqs@jou.edu.cn","School of Computer Engineering, Jiangsu Ocean University, No. 59, Cangwu Road, Haizhou District, Lianyungang, 222000, Jiangsu, China. zqs@jou.edu.cn"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Jiangsu Institute of Marine Resources Development, Jiangsu Ocean University, No. 59, Cangwu Road, Haizhou District, Lianyungang, 222000, Jiangsu, China. zqs@jou.edu.cn","institution_ids":["https://openalex.org/I2801481043"]},{"raw_affiliation_string":"School of Computer Engineering, Jiangsu Ocean University, No. 59, Cangwu Road, Haizhou District, Lianyungang, 222000, Jiangsu, China. zqs@jou.edu.cn","institution_ids":["https://openalex.org/I4210153482"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070877395","display_name":"Zhenyu Sun","orcid":"https://orcid.org/0000-0001-6061-8484"},"institutions":[{"id":"https://openalex.org/I80432865","display_name":"Hainan Tropical Ocean University","ror":"https://ror.org/01y5fjx51","country_code":"CN","type":"education","lineage":["https://openalex.org/I80432865"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhenyu Sun","raw_affiliation_strings":["School of Computer Engineering, Jiangsu Ocean University, No. 59, Cangwu Road, Haizhou District, Lianyungang, 222000, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Engineering, Jiangsu Ocean University, No. 59, Cangwu Road, Haizhou District, Lianyungang, 222000, Jiangsu, China","institution_ids":["https://openalex.org/I80432865"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062061044","display_name":"Zhaoman Zhong","orcid":"https://orcid.org/0000-0001-8333-6949"},"institutions":[{"id":"https://openalex.org/I80432865","display_name":"Hainan Tropical Ocean University","ror":"https://ror.org/01y5fjx51","country_code":"CN","type":"education","lineage":["https://openalex.org/I80432865"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhaoman Zhong","raw_affiliation_strings":["School of Computer Engineering, Jiangsu Ocean University, No. 59, Cangwu Road, Haizhou District, Lianyungang, 222000, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Engineering, Jiangsu Ocean University, No. 59, Cangwu Road, Haizhou District, Lianyungang, 222000, Jiangsu, China","institution_ids":["https://openalex.org/I80432865"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037500303","display_name":"Huihui Yang","orcid":"https://orcid.org/0000-0001-5638-5964"},"institutions":[{"id":"https://openalex.org/I3018263800","display_name":"Huzhou University","ror":"https://ror.org/04mvpxy20","country_code":"CN","type":"education","lineage":["https://openalex.org/I3018263800"]},{"id":"https://openalex.org/I4210087590","display_name":"Huzhou Vocational and Technical College","ror":"https://ror.org/002hfez23","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210087590"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Huihui Yang","raw_affiliation_strings":["Public Teaching and Research Department, Huzhou College, No. 1, Xueshi Road, Huzhou, 313000, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Public Teaching and Research Department, Huzhou College, No. 1, Xueshi Road, Huzhou, 313000, Jiangsu, China","institution_ids":["https://openalex.org/I3018263800","https://openalex.org/I4210087590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103695667","display_name":"Yalong Wei","orcid":null},"institutions":[{"id":"https://openalex.org/I80432865","display_name":"Hainan Tropical Ocean University","ror":"https://ror.org/01y5fjx51","country_code":"CN","type":"education","lineage":["https://openalex.org/I80432865"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yalong Wei","raw_affiliation_strings":["School of Computer Engineering, Jiangsu Ocean University, No. 59, Cangwu Road, Haizhou District, Lianyungang, 222000, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Engineering, Jiangsu Ocean University, No. 59, Cangwu Road, Haizhou District, Lianyungang, 222000, Jiangsu, China","institution_ids":["https://openalex.org/I80432865"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100298162","display_name":"Junjie Xu","orcid":"https://orcid.org/0000-0002-1493-1530"},"institutions":[{"id":"https://openalex.org/I80432865","display_name":"Hainan Tropical Ocean University","ror":"https://ror.org/01y5fjx51","country_code":"CN","type":"education","lineage":["https://openalex.org/I80432865"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Junjie Xu","raw_affiliation_strings":["School of Computer Engineering, Jiangsu Ocean University, No. 59, Cangwu Road, Haizhou District, Lianyungang, 222000, Jiangsu, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Engineering, Jiangsu Ocean University, No. 59, Cangwu Road, Haizhou District, Lianyungang, 222000, Jiangsu, China","institution_ids":["https://openalex.org/I80432865"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.0909,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.81419794,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":91,"max":95},"biblio":{"volume":"26","issue":"1","first_page":"177","last_page":"177"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9772999882698059,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9772999882698059,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.003000000026077032,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11273","display_name":"Advanced Graph Neural Networks","score":0.0020000000949949026,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5919573307037354},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.5408738851547241},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.49099472165107727},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.45145687460899353},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.42633068561553955},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4227268695831299},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.4198797643184662},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37947988510131836},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18217262625694275},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12230128049850464},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.11010336875915527},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.07176905870437622}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5919573307037354},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.5408738851547241},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.49099472165107727},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.45145687460899353},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.42633068561553955},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4227268695831299},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.4198797643184662},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37947988510131836},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18217262625694275},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12230128049850464},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.11010336875915527},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.07176905870437622},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000076722","descriptor_name":"Drug Development","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000076722","descriptor_name":"Drug Development","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000076722","descriptor_name":"Drug Development","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000076722","descriptor_name":"Drug Development","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000077321","descriptor_name":"Deep Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098422","descriptor_name":"Graph Neural Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098422","descriptor_name":"Graph Neural Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098422","descriptor_name":"Graph Neural Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000098422","descriptor_name":"Graph Neural Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-025-06195-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-025-06195-0","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-025-06195-0","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:40670964","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/40670964","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:72d42d96a6bd4f4c848df83be98f6c4b","is_oa":true,"landing_page_url":"https://doaj.org/article/72d42d96a6bd4f4c848df83be98f6c4b","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 26, Iss 1, Pp 1-16 (2025)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:12265306","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/12265306","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-025-06195-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-025-06195-0","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-025-06195-0","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2021682223","display_name":null,"funder_award_id":"72174079","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2706391282","display_name":null,"funder_award_id":"No. 72174079","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4412467904.pdf","grobid_xml":"https://content.openalex.org/works/W4412467904.grobid-xml"},"referenced_works_count":36,"referenced_works":["https://openalex.org/W1574447377","https://openalex.org/W1975147762","https://openalex.org/W1981276685","https://openalex.org/W2018518196","https://openalex.org/W2044424923","https://openalex.org/W2086286404","https://openalex.org/W2100257305","https://openalex.org/W2104950117","https://openalex.org/W2108069034","https://openalex.org/W2139736926","https://openalex.org/W2144000913","https://openalex.org/W2148145769","https://openalex.org/W2148512505","https://openalex.org/W2165674132","https://openalex.org/W2170146596","https://openalex.org/W2177411254","https://openalex.org/W2563206593","https://openalex.org/W2592742128","https://openalex.org/W2770261575","https://openalex.org/W2775714759","https://openalex.org/W2809216727","https://openalex.org/W2810986024","https://openalex.org/W2899788782","https://openalex.org/W3010761615","https://openalex.org/W3018980093","https://openalex.org/W3019745511","https://openalex.org/W3096561213","https://openalex.org/W3102943483","https://openalex.org/W3166613829","https://openalex.org/W3187647935","https://openalex.org/W3206585172","https://openalex.org/W4220796987","https://openalex.org/W4220837717","https://openalex.org/W4283259285","https://openalex.org/W4323653718","https://openalex.org/W4390096709"],"related_works":["https://openalex.org/W2415545834","https://openalex.org/W2069695727","https://openalex.org/W2391251536","https://openalex.org/W2150084125","https://openalex.org/W2118505788","https://openalex.org/W1802639773","https://openalex.org/W2362198218","https://openalex.org/W2019521278","https://openalex.org/W1984922432","https://openalex.org/W1972196578"],"abstract_inverted_index":{"BACKGROUND:":[0],"Accurately":[1],"identifying":[2],"drug-target":[3],"interactions":[4],"(DTI)":[5],"can":[6,60],"greatly":[7],"shorten":[8],"the":[9,15,27,43,104,111,122,126,148,159],"drug":[10,18,30,95,174],"development":[11],"cycle":[12],"and":[13,31,47,54,78,96,110,146],"reduce":[14],"cost":[16],"of":[17,29,94,128,162],"development.":[19,175],"In":[20],"current":[21],"deep":[22],"learning-based":[23],"DTI":[24,70],"prediction":[25,71],"models,":[26],"extraction":[28,77],"target":[32,97],"features":[33],"is":[34,108],"a":[35,50,69,170],"key":[36,153],"step":[37],"to":[38,90,131],"improve":[39],"model":[40,72,135,164],"performance.":[41],"At":[42],"same":[44],"time,":[45],"drugs":[46],"targets":[48],"form":[49],"complex":[51],"relational":[52,106],"network,":[53],"leveraging":[55],"existing":[56,105],"network":[57,107],"topological":[58],"relationships":[59],"obtain":[61],"more":[62],"comprehensive":[63],"feature":[64,86],"representations.":[65],"RESULTS:":[66],"We":[67],"propose":[68],"based":[73,100,117],"on":[74,101,118,142],"sequence":[75,85],"attribute":[76],"graph":[79,112,123],"neural":[80],"networks,":[81],"named":[82],"SaeGraphDTI.":[83],"First,":[84],"extractors":[87],"are":[88],"applied":[89],"extract":[91],"relevant":[92],"properties":[93],"sequences.":[98],"Then,":[99],"similarity":[102],"relationships,":[103],"supplemented,":[109],"encoder":[113],"updates":[114],"node":[115],"information":[116],"this":[119,163],"network.":[120],"Finally,":[121],"decoder":[124],"calculates":[125],"probability":[127],"edge":[129],"existence":[130],"predict":[132],"DTI.":[133],"Our":[134],"was":[136],"compared":[137],"with":[138],"other":[139],"state-of-the-art":[140],"methods":[141],"four":[143],"public":[144],"datasets":[145],"achieved":[147],"best":[149],"results":[150,157],"in":[151,165],"most":[152],"metrics.":[154],"CONCLUSION:":[155],"These":[156],"demonstrate":[158],"excellent":[160],"capability":[161],"predicting":[166],"potential":[167],"DTI,":[168],"providing":[169],"valuable":[171],"tool":[172],"for":[173]},"counts_by_year":[{"year":2025,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
