{"id":"https://openalex.org/W4403433483","doi":"https://doi.org/10.1186/s12859-024-05954-9","title":"repDilPCR: a tool for automated analysis of qPCR assays by the dilution-replicate method","display_name":"repDilPCR: a tool for automated analysis of qPCR assays by the dilution-replicate method","publication_year":2024,"publication_date":"2024-10-15","ids":{"openalex":"https://openalex.org/W4403433483","doi":"https://doi.org/10.1186/s12859-024-05954-9","pmid":"https://pubmed.ncbi.nlm.nih.gov/39407133"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-024-05954-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-024-05954-9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-024-05954-9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-024-05954-9","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089305258","display_name":"Deyan Y. Yosifov","orcid":"https://orcid.org/0000-0002-5473-4398"},"institutions":[{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I4210155144","display_name":"University Hospital Ulm","ror":"https://ror.org/05emabm63","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210155144"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Deyan Yordanov Yosifov","raw_affiliation_strings":["Cooperation Unit \"Mechanisms of Leukemogenesis\", German Cancer Research Center (DKFZ), Heidelberg, Germany. deyan.yosifov@uniklinik-ulm.de","Division of CLL, Department of Internal Medicine III, Ulm University Hospital, Ulm, Germany. deyan.yosifov@uniklinik-ulm.de","Division of CLL, Department of Internal Medicine III, Ulm University Hospital, Ulm, Germany"],"affiliations":[{"raw_affiliation_string":"Cooperation Unit \"Mechanisms of Leukemogenesis\", German Cancer Research Center (DKFZ), Heidelberg, Germany. deyan.yosifov@uniklinik-ulm.de","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"Division of CLL, Department of Internal Medicine III, Ulm University Hospital, Ulm, Germany. deyan.yosifov@uniklinik-ulm.de","institution_ids":["https://openalex.org/I4210155144"]},{"raw_affiliation_string":"Division of CLL, Department of Internal Medicine III, Ulm University Hospital, Ulm, Germany","institution_ids":["https://openalex.org/I4210155144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067427330","display_name":"Michaela Reichenzeller","orcid":null},"institutions":[{"id":"https://openalex.org/I4210155144","display_name":"University Hospital Ulm","ror":"https://ror.org/05emabm63","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210155144"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Michaela Reichenzeller","raw_affiliation_strings":["Division of CLL, Department of Internal Medicine III, Ulm University Hospital, Ulm, Germany"],"affiliations":[{"raw_affiliation_string":"Division of CLL, Department of Internal Medicine III, Ulm University Hospital, Ulm, Germany","institution_ids":["https://openalex.org/I4210155144"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019866348","display_name":"Stephan Stilgenbauer","orcid":"https://orcid.org/0000-0002-6830-9296"},"institutions":[{"id":"https://openalex.org/I4210155144","display_name":"University Hospital Ulm","ror":"https://ror.org/05emabm63","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210155144"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Stephan Stilgenbauer","raw_affiliation_strings":["Comprehensive Cancer Center Ulm (CCCU), Ulm University Hospital, Ulm, Germany","Division of CLL, Department of Internal Medicine III, Ulm University Hospital, Ulm, Germany"],"affiliations":[{"raw_affiliation_string":"Comprehensive Cancer Center Ulm (CCCU), Ulm University Hospital, Ulm, Germany","institution_ids":["https://openalex.org/I4210155144"]},{"raw_affiliation_string":"Division of CLL, Department of Internal Medicine III, Ulm University Hospital, Ulm, Germany","institution_ids":["https://openalex.org/I4210155144"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089869132","display_name":"Daniel Mertens","orcid":"https://orcid.org/0000-0003-0227-7188"},"institutions":[{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I4210155144","display_name":"University Hospital Ulm","ror":"https://ror.org/05emabm63","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210155144"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Daniel Mertens","raw_affiliation_strings":["Cooperation Unit \"Mechanisms of Leukemogenesis\", German Cancer Research Center (DKFZ), Heidelberg, Germany","Division of CLL, Department of Internal Medicine III, Ulm University Hospital, Ulm, Germany"],"affiliations":[{"raw_affiliation_string":"Cooperation Unit \"Mechanisms of Leukemogenesis\", German Cancer Research Center (DKFZ), Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"Division of CLL, Department of Internal Medicine III, Ulm University Hospital, Ulm, Germany","institution_ids":["https://openalex.org/I4210155144"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5089305258"],"corresponding_institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909","https://openalex.org/I4210155144"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.0,"has_fulltext":false,"cited_by_count":0,"citation_normalized_percentile":{"value":0.16431563,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"25","issue":"1","first_page":"331","last_page":"331"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9797999858856201,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9753999710083008,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/replicate","display_name":"Replicate","score":0.9735555648803711},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6622619032859802},{"id":"https://openalex.org/keywords/replication","display_name":"Replication (statistics)","score":0.6579793691635132},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5699784159660339},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.48465877771377563},{"id":"https://openalex.org/keywords/serial-dilution","display_name":"Serial dilution","score":0.4776812195777893},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.46860918402671814},{"id":"https://openalex.org/keywords/standard-curve","display_name":"Standard curve","score":0.4640817642211914},{"id":"https://openalex.org/keywords/linear-regression","display_name":"Linear regression","score":0.44629746675491333},{"id":"https://openalex.org/keywords/design-of-experiments","display_name":"Design of experiments","score":0.42099544405937195},{"id":"https://openalex.org/keywords/standard-deviation","display_name":"Standard deviation","score":0.4117678999900818},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.33683615922927856},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.24116551876068115},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.238144189119339},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.20981067419052124},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13101083040237427},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.11362168192863464}],"concepts":[{"id":"https://openalex.org/C2781162219","wikidata":"https://www.wikidata.org/wiki/Q26250693","display_name":"Replicate","level":2,"score":0.9735555648803711},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6622619032859802},{"id":"https://openalex.org/C12590798","wikidata":"https://www.wikidata.org/wiki/Q3933199","display_name":"Replication (statistics)","level":2,"score":0.6579793691635132},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5699784159660339},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.48465877771377563},{"id":"https://openalex.org/C184112429","wikidata":"https://www.wikidata.org/wiki/Q476174","display_name":"Serial dilution","level":3,"score":0.4776812195777893},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.46860918402671814},{"id":"https://openalex.org/C70784841","wikidata":"https://www.wikidata.org/wiki/Q7598338","display_name":"Standard curve","level":2,"score":0.4640817642211914},{"id":"https://openalex.org/C48921125","wikidata":"https://www.wikidata.org/wiki/Q10861030","display_name":"Linear regression","level":2,"score":0.44629746675491333},{"id":"https://openalex.org/C34559072","wikidata":"https://www.wikidata.org/wiki/Q2334061","display_name":"Design of experiments","level":2,"score":0.42099544405937195},{"id":"https://openalex.org/C22679943","wikidata":"https://www.wikidata.org/wiki/Q159375","display_name":"Standard deviation","level":2,"score":0.4117678999900818},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.33683615922927856},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.24116551876068115},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.238144189119339},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.20981067419052124},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13101083040237427},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.11362168192863464},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060888","descriptor_name":"Real-Time Polymerase Chain Reaction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D060888","descriptor_name":"Real-Time Polymerase Chain Reaction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D060888","descriptor_name":"Real-Time Polymerase Chain Reaction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D060888","descriptor_name":"Real-Time Polymerase Chain Reaction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-024-05954-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-024-05954-9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-024-05954-9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:39407133","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/39407133","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:11476982","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/11476982","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC11476982/pdf/12859_2024_Article_5954.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:aa02beb853fb43d084d9266926739805","is_oa":true,"landing_page_url":"https://doaj.org/article/aa02beb853fb43d084d9266926739805","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 25, Iss 1, Pp 1-13 (2024)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s12859-024-05954-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-024-05954-9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-024-05954-9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.46000000834465027},{"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals","score":0.4399999976158142}],"awards":[{"id":"https://openalex.org/G5756622520","display_name":null,"funder_award_id":"SFB1074, subprojects B1 and B2","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4403433483.pdf","grobid_xml":"https://content.openalex.org/works/W4403433483.grobid-xml"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W234950505","https://openalex.org/W1577577364","https://openalex.org/W1973930872","https://openalex.org/W2018202875","https://openalex.org/W2088451316","https://openalex.org/W2099618343","https://openalex.org/W2108244474","https://openalex.org/W2115098571","https://openalex.org/W2115513841","https://openalex.org/W2136309995","https://openalex.org/W2168420558","https://openalex.org/W2169373818","https://openalex.org/W2173292682","https://openalex.org/W2953613357","https://openalex.org/W2954836300","https://openalex.org/W2991134717","https://openalex.org/W3209441558","https://openalex.org/W4286218944"],"related_works":["https://openalex.org/W2053915529","https://openalex.org/W2111659373","https://openalex.org/W4398395683","https://openalex.org/W4398298289","https://openalex.org/W4398690544","https://openalex.org/W2090533571","https://openalex.org/W1894140202","https://openalex.org/W2115637608","https://openalex.org/W4290344257","https://openalex.org/W2896639661"],"abstract_inverted_index":null,"counts_by_year":[],"updated_date":"2026-03-08T08:50:53.379069","created_date":"2025-10-10T00:00:00"}
