{"id":"https://openalex.org/W37919681","doi":"https://doi.org/10.1186/s12859-023-05547-y","title":"Reviewed by Carl Freedman","display_name":"Reviewed by Carl Freedman","publication_year":2006,"publication_date":"2006-01-01","ids":{"openalex":"https://openalex.org/W37919681","doi":"https://doi.org/10.1186/s12859-023-05547-y","mag":"37919681"},"language":"en","primary_location":{"id":"mag:37919681","is_oa":true,"landing_page_url":"https://philpapers.org/rec/NEWRBC-2","pdf_url":null,"source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},"type":"article","indexed_in":[],"open_access":{"is_oa":true,"oa_status":"green","oa_url":"https://philpapers.org/rec/NEWRBC-2","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065586555","display_name":"John Newsinger","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"John Newsinger","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028025990","display_name":"Jeffrey Myers","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jeffrey Myers","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5037186775","display_name":"Christopher Hitchens","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Christopher Hitchens","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":0,"institutions_distinct_count":0,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":null,"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.00590664,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"24","issue":"1","first_page":"414","last_page":"414"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.1216999962925911,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.1216999962925911,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.1054999977350235,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.08240000158548355,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/freedman","display_name":"Freedman","score":0.6974539756774902},{"id":"https://openalex.org/keywords/philosophy","display_name":"Philosophy","score":0.3446204662322998},{"id":"https://openalex.org/keywords/political-science","display_name":"Political science","score":0.1995866596698761},{"id":"https://openalex.org/keywords/law","display_name":"Law","score":0.11448535323143005}],"concepts":[{"id":"https://openalex.org/C2781078094","wikidata":"https://www.wikidata.org/wiki/Q841571","display_name":"Freedman","level":2,"score":0.6974539756774902},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.3446204662322998},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.1995866596698761},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.11448535323143005}],"mesh":[],"locations_count":1,"locations":[{"id":"mag:37919681","is_oa":true,"landing_page_url":"https://philpapers.org/rec/NEWRBC-2","pdf_url":null,"source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null}],"best_oa_location":{"id":"mag:37919681","is_oa":true,"landing_page_url":"https://philpapers.org/rec/NEWRBC-2","pdf_url":null,"source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2807655124","display_name":null,"funder_award_id":"62202315","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5082899461","display_name":null,"funder_award_id":"62271329","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6446245973","display_name":null,"funder_award_id":"62250028","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":[],"abstract_inverted_index":{"Our":[0],"method":[1],"effectively":[2],"attenuates":[3],"the":[4],"noise":[5],"generated":[6],"by":[7],"stochastic":[8],"RNA":[9],"production,":[10],"resulting":[11],"in":[12,26,38],"more":[13],"accurate":[14],"detection":[15],"of":[16],"eRNAs.":[17],"Furthermore,":[18],"our":[19],"eRNA":[20],"prediction":[21],"model":[22],"exhibited":[23],"significant":[24],"accuracy":[25],"both":[27],"intra-cell":[28],"and":[29,35],"cross-cell":[30],"validation,":[31],"highlighting":[32],"its":[33],"robustness":[34],"potential":[36],"application":[37],"various":[39],"cellular":[40],"contexts.":[41]},"counts_by_year":[],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2016-06-24T00:00:00"}