{"id":"https://openalex.org/W4379470141","doi":"https://doi.org/10.1186/s12859-023-05320-1","title":"RegiSTORM: channel registration for multi-color stochastic optical reconstruction microscopy","display_name":"RegiSTORM: channel registration for multi-color stochastic optical reconstruction microscopy","publication_year":2023,"publication_date":"2023-06-05","ids":{"openalex":"https://openalex.org/W4379470141","doi":"https://doi.org/10.1186/s12859-023-05320-1","pmid":"https://pubmed.ncbi.nlm.nih.gov/37277712"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-023-05320-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-023-05320-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05320-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05320-1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083430034","display_name":"\u00d8ystein \u00d8vreb\u00f8","orcid":"https://orcid.org/0000-0001-9170-0202"},"institutions":[{"id":"https://openalex.org/I4210109636","display_name":"NIHR Imperial Biomedical Research Centre","ror":"https://ror.org/01kmhx639","country_code":"GB","type":"facility","lineage":["https://openalex.org/I34931013","https://openalex.org/I4210109636"]},{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"\u00d8ystein \u00d8vreb\u00f8","raw_affiliation_strings":["Department of Bioengineering, Imperial College London, London, SW7 2AZ, UK","Department of Materials, Imperial College London, London, SW7 2AZ, UK","Institute of Biomedical Engineering, Imperial College London, London, SW7 2AZ, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioengineering, Imperial College London, London, SW7 2AZ, UK","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"Department of Materials, Imperial College London, London, SW7 2AZ, UK","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"Institute of Biomedical Engineering, Imperial College London, London, SW7 2AZ, UK","institution_ids":["https://openalex.org/I4210109636","https://openalex.org/I47508984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011118275","display_name":"Miina Ojansivu","orcid":"https://orcid.org/0000-0002-5493-3530"},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Miina Ojansivu","raw_affiliation_strings":["Department of Medical Biochemistry and Biophysics, Karolinska Institute, 171 77, Stockholm, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Biochemistry and Biophysics, Karolinska Institute, 171 77, Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069504905","display_name":"Kimmo Kartasalo","orcid":"https://orcid.org/0000-0002-9470-4783"},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Kimmo Kartasalo","raw_affiliation_strings":["Department of Medical Epidemiology and Biostatistics, Karolinska Institute, 171 77, Stockholm, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Epidemiology and Biostatistics, Karolinska Institute, 171 77, Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004292213","display_name":"Hanna M. G. Barriga","orcid":"https://orcid.org/0000-0002-2530-5332"},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Hanna M. G. Barriga","raw_affiliation_strings":["Department of Medical Biochemistry and Biophysics, Karolinska Institute, 171 77, Stockholm, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Biochemistry and Biophysics, Karolinska Institute, 171 77, Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037799592","display_name":"Petter Ranefall","orcid":"https://orcid.org/0000-0002-6699-4015"},"institutions":[{"id":"https://openalex.org/I123387679","display_name":"Uppsala University","ror":"https://ror.org/048a87296","country_code":"SE","type":"education","lineage":["https://openalex.org/I123387679"]},{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Petter Ranefall","raw_affiliation_strings":["SciLifeLab BioImage Informatics Facility, and Department of Information Technology, Uppsala University, 751 05, Uppsala, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"SciLifeLab BioImage Informatics Facility, and Department of Information Technology, Uppsala University, 751 05, Uppsala, Sweden","institution_ids":["https://openalex.org/I123387679","https://openalex.org/I2800139495"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038866966","display_name":"Margaret N. Holme","orcid":"https://orcid.org/0000-0002-7314-9493"},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Margaret N. Holme","raw_affiliation_strings":["Department of Medical Biochemistry and Biophysics, Karolinska Institute, 171 77, Stockholm, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Biochemistry and Biophysics, Karolinska Institute, 171 77, Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5044430674","display_name":"Molly M. Stevens","orcid":"https://orcid.org/0000-0002-7335-266X"},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]},{"id":"https://openalex.org/I4210109636","display_name":"NIHR Imperial Biomedical Research Centre","ror":"https://ror.org/01kmhx639","country_code":"GB","type":"facility","lineage":["https://openalex.org/I34931013","https://openalex.org/I4210109636"]},{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]}],"countries":["GB","SE"],"is_corresponding":true,"raw_author_name":"Molly M. Stevens","raw_affiliation_strings":["Department of Bioengineering, Imperial College London, London, SW7 2AZ, UK. m.stevens@imperial.ac.uk","Department of Materials, Imperial College London, London, SW7 2AZ, UK. m.stevens@imperial.ac.uk","Department of Medical Biochemistry and Biophysics, Karolinska Institute, 171 77, Stockholm, Sweden. m.stevens@imperial.ac.uk","Institute of Biomedical Engineering, Imperial College London, London, SW7 2AZ, UK. m.stevens@imperial.ac.uk","Department of Medical Biochemistry and Biophysics, Karolinska Institute, 171 77, Stockholm, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioengineering, Imperial College London, London, SW7 2AZ, UK. m.stevens@imperial.ac.uk","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"Department of Materials, Imperial College London, London, SW7 2AZ, UK. m.stevens@imperial.ac.uk","institution_ids":["https://openalex.org/I47508984"]},{"raw_affiliation_string":"Department of Medical Biochemistry and Biophysics, Karolinska Institute, 171 77, Stockholm, Sweden. m.stevens@imperial.ac.uk","institution_ids":["https://openalex.org/I28166907"]},{"raw_affiliation_string":"Institute of Biomedical Engineering, Imperial College London, London, SW7 2AZ, UK. m.stevens@imperial.ac.uk","institution_ids":["https://openalex.org/I47508984","https://openalex.org/I4210109636"]},{"raw_affiliation_string":"Department of Medical Biochemistry and Biophysics, Karolinska Institute, 171 77, Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5044430674"],"corresponding_institution_ids":["https://openalex.org/I28166907","https://openalex.org/I4210109636","https://openalex.org/I47508984"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.9881,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.83050652,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":95},"biblio":{"volume":"24","issue":"1","first_page":"237","last_page":"237"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9733999967575073,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10540","display_name":"Advanced Fluorescence Microscopy Techniques","score":0.9733999967575073,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10407","display_name":"Lipid Membrane Structure and Behavior","score":0.012400000356137753,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11897","display_name":"Digital Holography and Microscopy","score":0.0035000001080334187,"subfield":{"id":"https://openalex.org/subfields/3107","display_name":"Atomic and Molecular Physics, and Optics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/fiducial-marker","display_name":"Fiducial marker","score":0.8581691980361938},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.699673593044281},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.6542648673057556},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5423669219017029},{"id":"https://openalex.org/keywords/channel","display_name":"Channel (broadcasting)","score":0.5414185523986816},{"id":"https://openalex.org/keywords/python","display_name":"Python (programming language)","score":0.5033602118492126},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.4576796889305115}],"concepts":[{"id":"https://openalex.org/C173974348","wikidata":"https://www.wikidata.org/wiki/Q1469893","display_name":"Fiducial marker","level":2,"score":0.8581691980361938},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.699673593044281},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.6542648673057556},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5423669219017029},{"id":"https://openalex.org/C127162648","wikidata":"https://www.wikidata.org/wiki/Q16858953","display_name":"Channel (broadcasting)","level":2,"score":0.5414185523986816},{"id":"https://openalex.org/C519991488","wikidata":"https://www.wikidata.org/wiki/Q28865","display_name":"Python (programming language)","level":2,"score":0.5033602118492126},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.4576796889305115},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008853","descriptor_name":"Microscopy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D008853","descriptor_name":"Microscopy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D008853","descriptor_name":"Microscopy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/s12859-023-05320-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-023-05320-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05320-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:37277712","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37277712","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:DiVA.org:uu-506972","is_oa":true,"landing_page_url":"http://urn.kb.se/resolve?urn=urn:nbn:se:uu:diva-506972","pdf_url":"https://uu.diva-portal.org/smash/get/diva2:1778965/FULLTEXT01","source":{"id":"https://openalex.org/S4306401559","display_name":"KTH Publication Database DiVA (KTH Royal Institute of Technology)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:10242778","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10242778","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10242778/pdf/12859_2023_Article_5320.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:22d04680a034445f873b0e70e917aec8","is_oa":true,"landing_page_url":"https://doaj.org/article/22d04680a034445f873b0e70e917aec8","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 24, Iss 1, Pp 1-18 (2023)","raw_type":"article"},{"id":"pmh:oai:spiral.imperial.ac.uk:10044/1/104495","is_oa":true,"landing_page_url":"http://hdl.handle.net/10044/1/104495","pdf_url":null,"source":{"id":"https://openalex.org/S4306401396","display_name":"Spiral (Imperial College London)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I47508984","host_organization_name":"Imperial College London","host_organization_lineage":["https://openalex.org/I47508984"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"18","raw_type":"Journal Article"}],"best_oa_location":{"id":"doi:10.1186/s12859-023-05320-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-023-05320-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05320-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/14","display_name":"Life below water","score":0.6000000238418579}],"awards":[{"id":"https://openalex.org/G5918438204","display_name":null,"funder_award_id":"VR-RFI 2019-00217","funder_id":"https://openalex.org/F4320325677","funder_display_name":"Science for Life Laboratory"}],"funders":[{"id":"https://openalex.org/F4320315474","display_name":"Chan Zuckerberg Initiative","ror":"https://ror.org/02qenvm24"},{"id":"https://openalex.org/F4320322282","display_name":"Jane ja Aatos Erkon S\u00e4\u00e4ti\u00f6","ror":"https://ror.org/03vxy9y38"},{"id":"https://openalex.org/F4320322315","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691"},{"id":"https://openalex.org/F4320324406","display_name":"Paulon S\u00e4\u00e4ti\u00f6","ror":"https://ror.org/048e7gn38"},{"id":"https://openalex.org/F4320325677","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22"},{"id":"https://openalex.org/F4320327840","display_name":"Otto A. Malm Lahjoitusrahasto","ror":"https://ror.org/05srazs86"},{"id":"https://openalex.org/F4320332999","display_name":"Horizon 2020 Framework Programme","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4379470141.pdf"},"referenced_works_count":44,"referenced_works":["https://openalex.org/W1967407513","https://openalex.org/W1972145831","https://openalex.org/W1973274811","https://openalex.org/W1981475064","https://openalex.org/W1985646440","https://openalex.org/W1992858116","https://openalex.org/W1997904982","https://openalex.org/W2043709234","https://openalex.org/W2049981393","https://openalex.org/W2061659286","https://openalex.org/W2063549868","https://openalex.org/W2075030758","https://openalex.org/W2077746083","https://openalex.org/W2085888832","https://openalex.org/W2097110160","https://openalex.org/W2098066812","https://openalex.org/W2099540110","https://openalex.org/W2106316394","https://openalex.org/W2120504118","https://openalex.org/W2125505095","https://openalex.org/W2126635242","https://openalex.org/W2133287637","https://openalex.org/W2137753785","https://openalex.org/W2147555557","https://openalex.org/W2149383141","https://openalex.org/W2162899289","https://openalex.org/W2165558283","https://openalex.org/W2167279371","https://openalex.org/W2215505233","https://openalex.org/W2239491650","https://openalex.org/W2280609025","https://openalex.org/W2518602358","https://openalex.org/W2619274043","https://openalex.org/W2752685019","https://openalex.org/W2790254351","https://openalex.org/W2797351134","https://openalex.org/W2801396275","https://openalex.org/W2903593774","https://openalex.org/W2934437784","https://openalex.org/W2939162140","https://openalex.org/W2953589696","https://openalex.org/W2973635480","https://openalex.org/W3048271914","https://openalex.org/W4313380141"],"related_works":["https://openalex.org/W1891287906","https://openalex.org/W2036807459","https://openalex.org/W2775347418","https://openalex.org/W1969923398","https://openalex.org/W4313547792","https://openalex.org/W4361019548","https://openalex.org/W2537141224","https://openalex.org/W1972983025","https://openalex.org/W2527429796","https://openalex.org/W3205412883"],"abstract_inverted_index":{"BACKGROUND:":[0],"Stochastic":[1],"optical":[2],"reconstruction":[3],"microscopy":[4,8],"(STORM),":[5],"a":[6,64,70,86,154,219],"super-resolution":[7],"technique":[9,71],"based":[10,111],"on":[11,112,129,159],"single-molecule":[12],"localizations,":[13],"has":[14],"become":[15],"popular":[16],"to":[17,24,32,54,194,197],"characterize":[18],"sub-diffraction":[19],"limit":[20],"targets.":[21],"However,":[22],"due":[23,53],"lengthy":[25],"image":[26],"acquisition,":[27],"STORM":[28,95,108,172,201],"recordings":[29,130,173],"are":[30],"prone":[31],"sample":[33],"drift.":[34],"Existing":[35],"cross-correlation":[36],"or":[37,223],"fiducial":[38,98],"marker-based":[39],"algorithms":[40],"allow":[41],"correcting":[42],"the":[43,76,101,107,144,151,181],"drift":[44,56],"within":[45],"each":[46],"channel,":[47],"but":[48],"misalignment":[49,91],"between":[50],"channels":[51,96,202],"remains":[52],"interchannel":[55],"accumulating":[57],"during":[58],"sequential":[59],"channel":[60,90,122,146],"acquisition.":[61],"This":[62],"is":[63,204],"major":[65],"drawback":[66],"in":[67,100,153],"multi-color":[68],"STORM,":[69],"of":[72,78,131,174,184],"utmost":[73],"importance":[74],"for":[75,88,121,162],"characterization":[77],"various":[79],"biological":[80],"interactions.":[81],"RESULTS:":[82],"We":[83,124],"developed":[84,189],"RegiSTORM,":[85],"software":[87,191],"reducing":[89],"by":[92,136],"accurately":[93,198],"registering":[94],"utilizing":[97],"markers":[99],"sample.":[102],"RegiSTORM":[103,168,190],"identifies":[104],"fiducials":[105,132],"from":[106],"localization":[109],"data":[110],"their":[113],"non-blinking":[114],"nature":[115],"and":[116,203,213,216],"uses":[117],"them":[118],"as":[119,134,207,218],"landmarks":[120],"registration.":[123],"first":[125],"demonstrated":[126,193],"accurate":[127],"registration":[128,140],"only,":[133],"evidenced":[135],"significantly":[137],"reduced":[138],"target":[139],"error":[141],"with":[142],"all":[143],"tested":[145],"combinations.":[147],"Next,":[148],"we":[149,165],"validated":[150],"performance":[152],"more":[155],"practically":[156],"relevant":[157],"setup":[158],"cells":[160],"multi-stained":[161],"tubulin.":[163],"Finally,":[164],"showed":[166],"that":[167],"successfully":[169],"registers":[170],"two-color":[171],"cargo-loaded":[175],"lipid":[176],"nanoparticles":[177],"without":[178],"fiducials,":[179],"demonstrating":[180],"broader":[182],"applicability":[183],"this":[185],"software.":[186],"CONCLUSIONS:":[187],"The":[188],"was":[192],"be":[195],"able":[196],"register":[199],"multiple":[200],"freely":[205],"available":[206],"open-source":[208],"(MIT":[209],"license)":[210],"at":[211],"https://github.com/oystein676/RegiSTORM.git":[212],"https://doi.org/10.5281/zenodo.5509861":[214],"(archived),":[215],"runs":[217],"standalone":[220],"executable":[221],"(Windows)":[222],"via":[224],"Python":[225],"(Mac":[226],"OS,":[227],"Linux).":[228]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-06-17T06:14:20.161405","created_date":"2025-10-10T00:00:00"}
