{"id":"https://openalex.org/W4375955768","doi":"https://doi.org/10.1186/s12859-023-05309-w","title":"GKLOMLI: a link prediction model for inferring miRNA\u2013lncRNA interactions by using Gaussian kernel-based method on network profile and linear optimization algorithm","display_name":"GKLOMLI: a link prediction model for inferring miRNA\u2013lncRNA interactions by using Gaussian kernel-based method on network profile and linear optimization algorithm","publication_year":2023,"publication_date":"2023-05-08","ids":{"openalex":"https://openalex.org/W4375955768","doi":"https://doi.org/10.1186/s12859-023-05309-w","pmid":"https://pubmed.ncbi.nlm.nih.gov/37158823"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-023-05309-w","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-023-05309-w","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05309-w","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05309-w","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101604712","display_name":"Leon Wong","orcid":"https://orcid.org/0000-0002-6864-991X"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]},{"id":"https://openalex.org/I4210165264","display_name":"Guangxi Academy of Sciences","ror":"https://ror.org/054x1kd82","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210165264"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Leon Wong","raw_affiliation_strings":["Guangxi Key Lab of Human-machine Interaction and Intelligent Decision, Guangxi Academy of Sciences, Nanning, 530007, China","Institute of Machine Learning and Systems Biology, School of Electronics and Information Engineering, Tongji University, 200092, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangxi Key Lab of Human-machine Interaction and Intelligent Decision, Guangxi Academy of Sciences, Nanning, 530007, China","institution_ids":["https://openalex.org/I4210165264"]},{"raw_affiliation_string":"Institute of Machine Learning and Systems Biology, School of Electronics and Information Engineering, Tongji University, 200092, Shanghai, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100436059","display_name":"Lei Wang","orcid":"https://orcid.org/0000-0003-0184-307X"},"institutions":[{"id":"https://openalex.org/I4210159676","display_name":"Zaozhuang University","ror":"https://ror.org/05x21tp94","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210159676"]},{"id":"https://openalex.org/I4210165264","display_name":"Guangxi Academy of Sciences","ror":"https://ror.org/054x1kd82","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210165264"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Lei Wang","raw_affiliation_strings":["College of Information Science and Engineering, Zaozhuang University, Zaozhuang, 277160, China. leiwang@gxas.cn","Guangxi Key Lab of Human-machine Interaction and Intelligent Decision, Guangxi Academy of Sciences, Nanning, 530007, China. leiwang@gxas.cn","Guangxi Key Lab of Human-machine Interaction and Intelligent Decision, Guangxi Academy of Sciences, Nanning, 530007, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Information Science and Engineering, Zaozhuang University, Zaozhuang, 277160, China. leiwang@gxas.cn","institution_ids":["https://openalex.org/I4210159676"]},{"raw_affiliation_string":"Guangxi Key Lab of Human-machine Interaction and Intelligent Decision, Guangxi Academy of Sciences, Nanning, 530007, China. leiwang@gxas.cn","institution_ids":["https://openalex.org/I4210165264"]},{"raw_affiliation_string":"Guangxi Key Lab of Human-machine Interaction and Intelligent Decision, Guangxi Academy of Sciences, Nanning, 530007, China","institution_ids":["https://openalex.org/I4210165264"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019805735","display_name":"Zhu\u2010Hong You","orcid":"https://orcid.org/0000-0003-1266-2696"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zhu-Hong You","raw_affiliation_strings":["School of Computer Science, Northwestern Polytechnical University, Xi'an, 710139, China. zhuhongyou@gmail.com","School of Computer Science, Northwestern Polytechnical University, Xi'an, 710139, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, Northwestern Polytechnical University, Xi'an, 710139, China. zhuhongyou@gmail.com","institution_ids":["https://openalex.org/I17145004"]},{"raw_affiliation_string":"School of Computer Science, Northwestern Polytechnical University, Xi'an, 710139, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007724310","display_name":"Changan Yuan","orcid":"https://orcid.org/0000-0001-6912-718X"},"institutions":[{"id":"https://openalex.org/I4210165264","display_name":"Guangxi Academy of Sciences","ror":"https://ror.org/054x1kd82","country_code":"CN","type":"government","lineage":["https://openalex.org/I4210165264"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chang-An Yuan","raw_affiliation_strings":["Guangxi Key Lab of Human-machine Interaction and Intelligent Decision, Guangxi Academy of Sciences, Nanning, 530007, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Guangxi Key Lab of Human-machine Interaction and Intelligent Decision, Guangxi Academy of Sciences, Nanning, 530007, China","institution_ids":["https://openalex.org/I4210165264"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017713277","display_name":"Yu\u2010An Huang","orcid":"https://orcid.org/0000-0002-5346-2394"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yu-An Huang","raw_affiliation_strings":["School of Computer Science, Northwestern Polytechnical University, Xi'an, 710139, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, Northwestern Polytechnical University, Xi'an, 710139, China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009498284","display_name":"Mei\u2010Yuan Cao","orcid":null},"institutions":[{"id":"https://openalex.org/I4403386666","display_name":"Guangdong Technology College","ror":"https://ror.org/00f0z8g04","country_code":null,"type":"education","lineage":["https://openalex.org/I4403386666"]},{"id":"https://openalex.org/I885383172","display_name":"National University of Malaysia","ror":"https://ror.org/00bw8d226","country_code":"MY","type":"education","lineage":["https://openalex.org/I885383172"]}],"countries":["MY"],"is_corresponding":false,"raw_author_name":"Mei-Yuan Cao","raw_affiliation_strings":["Faculty of Information Science and Technology, Universiti Kebangsaan Malaysia, UKM, 43600, Bangi, Selangor, Malaysia","School of Electrical and Electronic Engineering, Guangdong Technology College, Zhaoqing, 526100, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Information Science and Technology, Universiti Kebangsaan Malaysia, UKM, 43600, Bangi, Selangor, Malaysia","institution_ids":["https://openalex.org/I885383172"]},{"raw_affiliation_string":"School of Electrical and Electronic Engineering, Guangdong Technology College, Zhaoqing, 526100, China","institution_ids":["https://openalex.org/I4403386666"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5019805735","https://openalex.org/A5100436059"],"corresponding_institution_ids":["https://openalex.org/I17145004","https://openalex.org/I4210159676","https://openalex.org/I4210165264"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":6.2501,"has_fulltext":true,"cited_by_count":59,"citation_normalized_percentile":{"value":0.97773663,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"24","issue":"1","first_page":"188","last_page":"188"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.6771000027656555,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.6771000027656555,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.25429999828338623,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11765","display_name":"Circular RNAs in diseases","score":0.017899999395012856,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/kernel","display_name":"Kernel (algebra)","score":0.5898829102516174},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5789462327957153},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.554214358329773},{"id":"https://openalex.org/keywords/metric","display_name":"Metric (unit)","score":0.5282180309295654},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5169274210929871},{"id":"https://openalex.org/keywords/gaussian","display_name":"Gaussian","score":0.5034894347190857},{"id":"https://openalex.org/keywords/cross-validation","display_name":"Cross-validation","score":0.4783287048339844},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.4128355085849762},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3974534571170807},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37949493527412415},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.35411083698272705},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.274111270904541},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.19442501664161682},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10154283046722412},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09959399700164795},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.08545583486557007}],"concepts":[{"id":"https://openalex.org/C74193536","wikidata":"https://www.wikidata.org/wiki/Q574844","display_name":"Kernel (algebra)","level":2,"score":0.5898829102516174},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5789462327957153},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.554214358329773},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.5282180309295654},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5169274210929871},{"id":"https://openalex.org/C163716315","wikidata":"https://www.wikidata.org/wiki/Q901177","display_name":"Gaussian","level":2,"score":0.5034894347190857},{"id":"https://openalex.org/C27181475","wikidata":"https://www.wikidata.org/wiki/Q541014","display_name":"Cross-validation","level":2,"score":0.4783287048339844},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.4128355085849762},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3974534571170807},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37949493527412415},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.35411083698272705},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.274111270904541},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.19442501664161682},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10154283046722412},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09959399700164795},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.08545583486557007},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D062085","descriptor_name":"RNA, Long Noncoding","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-023-05309-w","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-023-05309-w","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05309-w","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:37158823","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37158823","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10169329","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10169329","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10169329/pdf/12859_2023_Article_5309.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:c4242103bff744e5a5d5eb502d017441","is_oa":true,"landing_page_url":"https://doaj.org/article/c4242103bff744e5a5d5eb502d017441","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 24, Iss 1, Pp 1-14 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s12859-023-05309-w","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-023-05309-w","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05309-w","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3588239447","display_name":null,"funder_award_id":"61702444","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G53239543","display_name":null,"funder_award_id":"2018-XBQNXZ-B-008","funder_id":"https://openalex.org/F4320328015","funder_display_name":"West Light Foundation of the Chinese Academy of Sciences"},{"id":"https://openalex.org/G7552262577","display_name":null,"funder_award_id":"62172355","funder_id":"https://openalex.org/F4320335869","funder_display_name":"National Social Science Fund of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320328015","display_name":"West Light Foundation of the Chinese Academy of Sciences","ror":null},{"id":"https://openalex.org/F4320335869","display_name":"National Social Science Fund of China","ror":null}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W4375955768.pdf"},"referenced_works_count":57,"referenced_works":["https://openalex.org/W2023691360","https://openalex.org/W2044832480","https://openalex.org/W2046387002","https://openalex.org/W2053835153","https://openalex.org/W2055214702","https://openalex.org/W2074487794","https://openalex.org/W2077327925","https://openalex.org/W2077475358","https://openalex.org/W2085928743","https://openalex.org/W2094292925","https://openalex.org/W2103151642","https://openalex.org/W2104052135","https://openalex.org/W2108051165","https://openalex.org/W2108638497","https://openalex.org/W2122915854","https://openalex.org/W2123250471","https://openalex.org/W2128768066","https://openalex.org/W2134629862","https://openalex.org/W2148512186","https://openalex.org/W2149785901","https://openalex.org/W2151384546","https://openalex.org/W2154793065","https://openalex.org/W2155512005","https://openalex.org/W2158135353","https://openalex.org/W2163562805","https://openalex.org/W2165423269","https://openalex.org/W2165521619","https://openalex.org/W2174734928","https://openalex.org/W2237531559","https://openalex.org/W2278525075","https://openalex.org/W2282084472","https://openalex.org/W2509738156","https://openalex.org/W2766950760","https://openalex.org/W2768632638","https://openalex.org/W2845313104","https://openalex.org/W2888881065","https://openalex.org/W2892139383","https://openalex.org/W2894749196","https://openalex.org/W2913811903","https://openalex.org/W2916704833","https://openalex.org/W2937836427","https://openalex.org/W2943935116","https://openalex.org/W2977685097","https://openalex.org/W2989384289","https://openalex.org/W2992976613","https://openalex.org/W2995337846","https://openalex.org/W2999547660","https://openalex.org/W3006715646","https://openalex.org/W3036837921","https://openalex.org/W3202143517","https://openalex.org/W4200144569","https://openalex.org/W4205705151","https://openalex.org/W4206995041","https://openalex.org/W4246271082","https://openalex.org/W4283592141","https://openalex.org/W4293335476","https://openalex.org/W4296809786"],"related_works":["https://openalex.org/W816105089","https://openalex.org/W912456583","https://openalex.org/W4318240167","https://openalex.org/W2375480909","https://openalex.org/W2353314428","https://openalex.org/W2012019886","https://openalex.org/W2166090428","https://openalex.org/W1527929073","https://openalex.org/W2415545834","https://openalex.org/W2381021552"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,190],"limited":[2],"knowledge":[3],"of":[4,12,26,82,127,162,221,250],"miRNA-lncRNA":[5,107,113,155],"interactions":[6,35,108,238],"is":[7,230],"considered":[8],"as":[9],"an":[10,111],"obstruction":[11],"revealing":[13],"the":[14,24,34,116,133,141,160,194,217,247,251],"regulatory":[15],"mechanism.":[16],"Accumulating":[17],"evidence":[18],"on":[19,97,132,184],"Human":[20],"diseases":[21],"indicates":[22],"that":[23,51],"modulation":[25],"gene":[27],"expression":[28],"has":[29],"a":[30,79,91,145,185],"great":[31],"relationship":[32],"with":[33,60,137,227],"between":[36,239],"miRNAs":[37,128],"and":[38,46,57,65,101,129,140,169,213,219,241,245],"lncRNAs.":[39,130],"However,":[40],"such":[41],"interaction":[42,114,143],"validation":[43],"via":[44],"crosslinking-immunoprecipitation":[45],"high-throughput":[47],"sequencing":[48],"(CLIP-seq)":[49],"experiments":[50],"inevitably":[52],"costs":[53],"too":[54],"much":[55],"money":[56],"time":[58],"but":[59],"unsatisfactory":[61],"results.":[62],"Therefore,":[63],"more":[64,66],"computational":[67],"prediction":[68,94,149],"tools":[69],"have":[70],"been":[71],"developed":[72],"to":[73,122,232,235],"offer":[74],"many":[75],"reliable":[76],"candidates":[77],"for":[78,105,153],"better":[80],"design":[81],"further":[83],"bio-experiments.":[84],"METHODS:":[85],"In":[86],"this":[87],"work,":[88],"we":[89],"proposed":[90,164,223],"novel":[92],"link":[93,148],"model":[95,150],"based":[96],"Gaussian":[98,117],"kernel-based":[99,118],"method":[100,119],"linear":[102,146],"optimization":[103],"algorithm":[104],"inferring":[106,154],"(GKLOMLI).":[109],"Given":[110],"observed":[112,142],"network,":[115,144],"was":[120,151,179],"employed":[121],"output":[123],"two":[124],"similarity":[125,138],"matrixes":[126,139],"Based":[131],"integrated":[134],"matrix":[135],"combined":[136],"optimization-based":[147],"trained":[152],"interactions.":[156],"RESULTS:":[157],"To":[158],"evaluate":[159],"performance":[161,229],"our":[163,222],"method,":[165],"k-fold":[166],"cross-validation":[167],"(CV)":[168],"leave-one-out":[170],"CV":[171,177],"were":[172],"implemented,":[173],"in":[174],"which":[175],"each":[176],"experiment":[178],"carried":[180],"out":[181],"100":[182],"times":[183],"training":[186],"set":[187],"generated":[188],"randomly.":[189],"high":[191,228],"area":[192],"under":[193],"curves":[195],"(AUCs)":[196],"at":[197],"0.8623":[198],"\u00b1":[199,204,209],"0.0027":[200],"(2-fold":[201],"CV),":[202,207,212],"0.9053":[203],"0.0017":[205],"(5-fold":[206],"0.9151":[208],"0.0013":[210],"(10-fold":[211],"0.9236":[214],"(LOO-CV),":[215],"illustrated":[216],"precision":[218],"reliability":[220],"method.":[224],"CONCLUSION:":[225],"GKLOMLI":[226],"anticipated":[231],"be":[233],"used":[234],"reveal":[236],"underlying":[237],"miRNA":[240],"their":[242],"target":[243],"lncRNAs,":[244],"deciphers":[246],"potential":[248],"mechanisms":[249],"complex":[252],"diseases.":[253]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":18},{"year":2024,"cited_by_count":30},{"year":2023,"cited_by_count":8}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
