{"id":"https://openalex.org/W4362596075","doi":"https://doi.org/10.1186/s12859-023-05263-7","title":"Prediction of hot spots in protein\u2013DNA binding interfaces based on discrete wavelet transform and wavelet packet transform","display_name":"Prediction of hot spots in protein\u2013DNA binding interfaces based on discrete wavelet transform and wavelet packet transform","publication_year":2023,"publication_date":"2023-04-04","ids":{"openalex":"https://openalex.org/W4362596075","doi":"https://doi.org/10.1186/s12859-023-05263-7","pmid":"https://pubmed.ncbi.nlm.nih.gov/37016308"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-023-05263-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-023-05263-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05263-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05263-7","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071534910","display_name":"Yu Sun","orcid":null},"institutions":[{"id":"https://openalex.org/I140221134","display_name":"Anhui Agricultural University","ror":"https://ror.org/0327f3359","country_code":"CN","type":"education","lineage":["https://openalex.org/I140221134"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yu Sun","raw_affiliation_strings":["Anhui Provincial Engineering Laboratory for Beidou Precision Agriculture Information, Anhui Agricultural University, Hefei, 230036, Anhui, China","School of Information and Computer, Anhui Agricultural University, Hefei, 230036, Anhui, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Anhui Provincial Engineering Laboratory for Beidou Precision Agriculture Information, Anhui Agricultural University, Hefei, 230036, Anhui, China","institution_ids":["https://openalex.org/I140221134"]},{"raw_affiliation_string":"School of Information and Computer, Anhui Agricultural University, Hefei, 230036, Anhui, China","institution_ids":["https://openalex.org/I140221134"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103039051","display_name":"Hongwei Wu","orcid":"https://orcid.org/0000-0002-8687-3843"},"institutions":[{"id":"https://openalex.org/I140221134","display_name":"Anhui Agricultural University","ror":"https://ror.org/0327f3359","country_code":"CN","type":"education","lineage":["https://openalex.org/I140221134"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongwei Wu","raw_affiliation_strings":["Anhui Provincial Engineering Laboratory for Beidou Precision Agriculture Information, Anhui Agricultural University, Hefei, 230036, Anhui, China","School of Information and Computer, Anhui Agricultural University, Hefei, 230036, Anhui, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Anhui Provincial Engineering Laboratory for Beidou Precision Agriculture Information, Anhui Agricultural University, Hefei, 230036, Anhui, China","institution_ids":["https://openalex.org/I140221134"]},{"raw_affiliation_string":"School of Information and Computer, Anhui Agricultural University, Hefei, 230036, Anhui, China","institution_ids":["https://openalex.org/I140221134"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100528226","display_name":"Zhengrong Xu","orcid":null},"institutions":[{"id":"https://openalex.org/I140221134","display_name":"Anhui Agricultural University","ror":"https://ror.org/0327f3359","country_code":"CN","type":"education","lineage":["https://openalex.org/I140221134"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhengrong Xu","raw_affiliation_strings":["Anhui Provincial Engineering Laboratory for Beidou Precision Agriculture Information, Anhui Agricultural University, Hefei, 230036, Anhui, China","School of Information and Computer, Anhui Agricultural University, Hefei, 230036, Anhui, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Anhui Provincial Engineering Laboratory for Beidou Precision Agriculture Information, Anhui Agricultural University, Hefei, 230036, Anhui, China","institution_ids":["https://openalex.org/I140221134"]},{"raw_affiliation_string":"School of Information and Computer, Anhui Agricultural University, Hefei, 230036, Anhui, China","institution_ids":["https://openalex.org/I140221134"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044447237","display_name":"Zhenyu Yue","orcid":"https://orcid.org/0000-0002-9370-2540"},"institutions":[{"id":"https://openalex.org/I140221134","display_name":"Anhui Agricultural University","ror":"https://ror.org/0327f3359","country_code":"CN","type":"education","lineage":["https://openalex.org/I140221134"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhenyu Yue","raw_affiliation_strings":["Anhui Provincial Engineering Laboratory for Beidou Precision Agriculture Information, Anhui Agricultural University, Hefei, 230036, Anhui, China","School of Information and Computer, Anhui Agricultural University, Hefei, 230036, Anhui, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Anhui Provincial Engineering Laboratory for Beidou Precision Agriculture Information, Anhui Agricultural University, Hefei, 230036, Anhui, China","institution_ids":["https://openalex.org/I140221134"]},{"raw_affiliation_string":"School of Information and Computer, Anhui Agricultural University, Hefei, 230036, Anhui, China","institution_ids":["https://openalex.org/I140221134"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100343451","display_name":"Ke Li","orcid":"https://orcid.org/0000-0001-7279-5015"},"institutions":[{"id":"https://openalex.org/I140221134","display_name":"Anhui Agricultural University","ror":"https://ror.org/0327f3359","country_code":"CN","type":"education","lineage":["https://openalex.org/I140221134"]},{"id":"https://openalex.org/I143868143","display_name":"Anhui University","ror":"https://ror.org/05th6yx34","country_code":"CN","type":"education","lineage":["https://openalex.org/I143868143"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Ke Li","raw_affiliation_strings":["Anhui Provincial Engineering Laboratory for Beidou Precision Agriculture Information, Anhui Agricultural University, Hefei, 230036, Anhui, China. like@ahau.edu.cn","Information Materials and Intelligent Sensing Laboratory of Anhui Province, Anhui University, Hefei, 230601, Anhui, China. like@ahau.edu.cn","School of Information and Computer, Anhui Agricultural University, Hefei, 230036, Anhui, China. like@ahau.edu.cn","Information Materials and Intelligent Sensing Laboratory of Anhui Province, Anhui University, Hefei, 230601, Anhui, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Anhui Provincial Engineering Laboratory for Beidou Precision Agriculture Information, Anhui Agricultural University, Hefei, 230036, Anhui, China. like@ahau.edu.cn","institution_ids":["https://openalex.org/I140221134"]},{"raw_affiliation_string":"Information Materials and Intelligent Sensing Laboratory of Anhui Province, Anhui University, Hefei, 230601, Anhui, China. like@ahau.edu.cn","institution_ids":["https://openalex.org/I143868143"]},{"raw_affiliation_string":"School of Information and Computer, Anhui Agricultural University, Hefei, 230036, Anhui, China. like@ahau.edu.cn","institution_ids":["https://openalex.org/I140221134"]},{"raw_affiliation_string":"Information Materials and Intelligent Sensing Laboratory of Anhui Province, Anhui University, Hefei, 230601, Anhui, China","institution_ids":["https://openalex.org/I143868143"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5100343451"],"corresponding_institution_ids":["https://openalex.org/I140221134","https://openalex.org/I143868143"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.2915,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.61916253,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"24","issue":"1","first_page":"129","last_page":"129"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.6488000154495239,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.6488000154495239,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.14190000295639038,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.08969999849796295,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/discrete-wavelet-transform","display_name":"Discrete wavelet transform","score":0.7134091854095459},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6221629977226257},{"id":"https://openalex.org/keywords/wavelet","display_name":"Wavelet","score":0.6110683083534241},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.59787917137146},{"id":"https://openalex.org/keywords/wavelet-transform","display_name":"Wavelet transform","score":0.5645139813423157},{"id":"https://openalex.org/keywords/wavelet-packet-decomposition","display_name":"Wavelet packet decomposition","score":0.5362180471420288},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5023403167724609},{"id":"https://openalex.org/keywords/hot-spot","display_name":"Hot spot (computer programming)","score":0.49054163694381714},{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.48603612184524536},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.43809768557548523},{"id":"https://openalex.org/keywords/entropy","display_name":"Entropy (arrow of time)","score":0.41017818450927734}],"concepts":[{"id":"https://openalex.org/C46286280","wikidata":"https://www.wikidata.org/wiki/Q2414958","display_name":"Discrete wavelet transform","level":4,"score":0.7134091854095459},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6221629977226257},{"id":"https://openalex.org/C47432892","wikidata":"https://www.wikidata.org/wiki/Q831390","display_name":"Wavelet","level":2,"score":0.6110683083534241},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.59787917137146},{"id":"https://openalex.org/C196216189","wikidata":"https://www.wikidata.org/wiki/Q2867","display_name":"Wavelet transform","level":3,"score":0.5645139813423157},{"id":"https://openalex.org/C155777637","wikidata":"https://www.wikidata.org/wiki/Q2736187","display_name":"Wavelet packet decomposition","level":4,"score":0.5362180471420288},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5023403167724609},{"id":"https://openalex.org/C199672914","wikidata":"https://www.wikidata.org/wiki/Q4241353","display_name":"Hot spot (computer programming)","level":2,"score":0.49054163694381714},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.48603612184524536},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.43809768557548523},{"id":"https://openalex.org/C106301342","wikidata":"https://www.wikidata.org/wiki/Q4117933","display_name":"Entropy (arrow of time)","level":2,"score":0.41017818450927734},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058067","descriptor_name":"Wavelet Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058067","descriptor_name":"Wavelet Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058067","descriptor_name":"Wavelet Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-023-05263-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-023-05263-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05263-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:37016308","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/37016308","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:10074722","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/10074722","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC10074722/pdf/12859_2023_Article_5263.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:3deb2908db694a488258664e352acac7","is_oa":true,"landing_page_url":"https://doaj.org/article/3deb2908db694a488258664e352acac7","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 24, Iss 1, Pp 1-16 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s12859-023-05263-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-023-05263-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05263-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8299999833106995,"display_name":"Affordable and clean energy","id":"https://metadata.un.org/sdg/7"}],"awards":[{"id":"https://openalex.org/G7959552749","display_name":null,"funder_award_id":"32272498","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320323887","display_name":"Anhui Agricultural University","ror":"https://ror.org/0327f3359"}],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4362596075.pdf"},"referenced_works_count":48,"referenced_works":["https://openalex.org/W117757365","https://openalex.org/W1503104790","https://openalex.org/W1974909022","https://openalex.org/W1986104731","https://openalex.org/W1992116297","https://openalex.org/W2003893812","https://openalex.org/W2008056655","https://openalex.org/W2008708467","https://openalex.org/W2048917743","https://openalex.org/W2051628563","https://openalex.org/W2054693978","https://openalex.org/W2058527555","https://openalex.org/W2060304859","https://openalex.org/W2073229442","https://openalex.org/W2106706488","https://openalex.org/W2116988482","https://openalex.org/W2118527389","https://openalex.org/W2120940429","https://openalex.org/W2124658247","https://openalex.org/W2136206140","https://openalex.org/W2141624700","https://openalex.org/W2143426320","https://openalex.org/W2148143831","https://openalex.org/W2152891635","https://openalex.org/W2154053567","https://openalex.org/W2156125289","https://openalex.org/W2295598076","https://openalex.org/W2508490449","https://openalex.org/W2557117995","https://openalex.org/W2605361745","https://openalex.org/W2766808155","https://openalex.org/W2798552692","https://openalex.org/W2888408766","https://openalex.org/W2904602199","https://openalex.org/W2911964244","https://openalex.org/W2935793619","https://openalex.org/W3084524758","https://openalex.org/W3085584475","https://openalex.org/W3093006823","https://openalex.org/W3118410381","https://openalex.org/W3155248445","https://openalex.org/W3157238284","https://openalex.org/W3160335751","https://openalex.org/W3188212317","https://openalex.org/W3191108515","https://openalex.org/W3204054344","https://openalex.org/W3210842402","https://openalex.org/W4247993926"],"related_works":["https://openalex.org/W2380372197","https://openalex.org/W1986475093","https://openalex.org/W2053682625","https://openalex.org/W68308810","https://openalex.org/W2076239227","https://openalex.org/W1506615375","https://openalex.org/W2085792030","https://openalex.org/W1588899229","https://openalex.org/W1967182499","https://openalex.org/W2205192157"],"abstract_inverted_index":{"BACKGROUND:":[0],"Identification":[1],"of":[2,17,36,56,99,141,191],"hot":[3,28,49,74,205],"spots":[4,29,75,206],"in":[5,60,158,203],"protein-DNA":[6,18,45],"binding":[7],"interfaces":[8],"is":[9,71],"extremely":[10],"important":[11],"for":[12,26,73],"understanding":[13],"the":[14,37,57,61,80,85,97,104,116,129,149,173],"underlying":[15],"mechanisms":[16],"interactions":[19],"and":[20,32,34,110,113,123,133,137,188,194,214],"drug":[21],"design.":[22],"Since":[23],"experimental":[24],"methods":[25,40],"identifying":[27],"are":[30,41,217],"time-consuming":[31],"expensive,":[33],"most":[35],"existing":[38],"computational":[39],"based":[42],"on":[43,181],"traditional":[44,117],"features":[46,109,118,157],"to":[47,52,90,95,127,147,171],"predict":[48],"spots,":[50],"unable":[51],"make":[53],"full":[54],"use":[55],"effective":[58],"information":[59,132],"features.":[62,144],"RESULTS:":[63],"In":[64,145],"this":[65],"work,":[66],"a":[67,139],"method":[68,177],"named":[69],"WTL-PDH":[70,197],"proposed":[72],"prediction.":[76],"To":[77],"deal":[78],"with":[79,185,209],"unbalanced":[81],"dataset,":[82],"we":[83,102,153],"used":[84,170],"Synthetic":[86],"Minority":[87],"Over-sampling":[88],"Technique":[89],"generate":[91],"minority":[92],"class":[93],"samples":[94],"achieve":[96,199],"balance":[98],"dataset.":[100],"First,":[101],"extracted":[103],"solvent":[105],"accessible":[106],"surface":[107],"area":[108],"structural":[111],"features,":[112],"then":[114],"processed":[115],"using":[119],"discrete":[120],"wavelet":[121,124,130,134],"transform":[122,126],"packet":[125],"extract":[128],"energy":[131],"entropy":[135],"information,":[136],"obtained":[138],"total":[140],"175":[142],"dimensional":[143],"order":[146],"obtain":[148],"best":[150],"feature":[151,160],"subset,":[152],"systematically":[154],"evaluate":[155],"these":[156],"various":[159],"selection":[161],"strategies.":[162],"Finally,":[163],"light":[164],"gradient":[165],"boosting":[166],"machine":[167],"(LightGBM)":[168],"was":[169],"establish":[172],"model.":[174],"CONCLUSIONS:":[175],"Our":[176],"achieved":[178],"good":[179],"results":[180],"independent":[182],"test":[183],"set":[184],"AUC,":[186],"MCC":[187],"F1":[189],"scores":[190],"0.838,":[192],"0.533":[193],"0.750,":[195],"respectively.":[196],"can":[198],"generally":[200],"better":[201],"performance":[202],"predicting":[204],"when":[207],"compared":[208],"state-of-the-art":[210],"methods.":[211],"The":[212],"dataset":[213],"source":[215],"code":[216],"available":[218],"at":[219],"https://github.com/chase2555/WTL-PDH":[220],".":[221]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-05-21T09:19:25.381259","created_date":"2025-10-10T00:00:00"}
