{"id":"https://openalex.org/W4319959416","doi":"https://doi.org/10.1186/s12859-023-05165-8","title":"Systematic analysis identifies XRCC4 as a potential immunological and prognostic biomarker associated with pan-cancer","display_name":"Systematic analysis identifies XRCC4 as a potential immunological and prognostic biomarker associated with pan-cancer","publication_year":2023,"publication_date":"2023-02-10","ids":{"openalex":"https://openalex.org/W4319959416","doi":"https://doi.org/10.1186/s12859-023-05165-8","pmid":"https://pubmed.ncbi.nlm.nih.gov/36765282"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-023-05165-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-023-05165-8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05165-8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05165-8","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101419610","display_name":"Yang Yu","orcid":"https://orcid.org/0000-0001-8460-9320"},"institutions":[{"id":"https://openalex.org/I2800200322","display_name":"Tianjin First Center Hospital","ror":"https://ror.org/02ch1zb66","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2800200322"]},{"id":"https://openalex.org/I5740404","display_name":"Tianjin Medical University","ror":"https://ror.org/02mh8wx89","country_code":"CN","type":"education","lineage":["https://openalex.org/I5740404"]},{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yang Yu","raw_affiliation_strings":["Organ Transplant Center, Tianjin First Central Hospital, Nankai University, Tianjin, 300190, China"],"affiliations":[{"raw_affiliation_string":"Organ Transplant Center, Tianjin First Central Hospital, Nankai University, Tianjin, 300190, China","institution_ids":["https://openalex.org/I2800200322","https://openalex.org/I5740404","https://openalex.org/I205237279"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102519103","display_name":"Yanyan Sun","orcid":"https://orcid.org/0009-0006-2357-9029"},"institutions":[{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]},{"id":"https://openalex.org/I5740404","display_name":"Tianjin Medical University","ror":"https://ror.org/02mh8wx89","country_code":"CN","type":"education","lineage":["https://openalex.org/I5740404"]},{"id":"https://openalex.org/I2800200322","display_name":"Tianjin First Center Hospital","ror":"https://ror.org/02ch1zb66","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2800200322"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanyan Sun","raw_affiliation_strings":["Organ Transplant Center, Tianjin First Central Hospital, Nankai University, Tianjin, 300190, China"],"affiliations":[{"raw_affiliation_string":"Organ Transplant Center, Tianjin First Central Hospital, Nankai University, Tianjin, 300190, China","institution_ids":["https://openalex.org/I2800200322","https://openalex.org/I5740404","https://openalex.org/I205237279"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069750250","display_name":"Zhaoxian Li","orcid":null},"institutions":[{"id":"https://openalex.org/I2800200322","display_name":"Tianjin First Center Hospital","ror":"https://ror.org/02ch1zb66","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2800200322"]},{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]},{"id":"https://openalex.org/I5740404","display_name":"Tianjin Medical University","ror":"https://ror.org/02mh8wx89","country_code":"CN","type":"education","lineage":["https://openalex.org/I5740404"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhaoxian Li","raw_affiliation_strings":["Organ Transplant Center, Tianjin First Central Hospital, Nankai University, Tianjin, 300190, China","School of Medicine, Nankai University, 94 Weijin Road, Tianjin, 300071, China"],"affiliations":[{"raw_affiliation_string":"Organ Transplant Center, Tianjin First Central Hospital, Nankai University, Tianjin, 300190, China","institution_ids":["https://openalex.org/I2800200322","https://openalex.org/I5740404","https://openalex.org/I205237279"]},{"raw_affiliation_string":"School of Medicine, Nankai University, 94 Weijin Road, Tianjin, 300071, China","institution_ids":["https://openalex.org/I205237279"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100677298","display_name":"Li Jiang","orcid":"https://orcid.org/0009-0001-8085-3788"},"institutions":[{"id":"https://openalex.org/I2800200322","display_name":"Tianjin First Center Hospital","ror":"https://ror.org/02ch1zb66","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2800200322"]},{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]},{"id":"https://openalex.org/I5740404","display_name":"Tianjin Medical University","ror":"https://ror.org/02mh8wx89","country_code":"CN","type":"education","lineage":["https://openalex.org/I5740404"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiang Li","raw_affiliation_strings":["Organ Transplant Center, Tianjin First Central Hospital, Nankai University, Tianjin, 300190, China"],"affiliations":[{"raw_affiliation_string":"Organ Transplant Center, Tianjin First Central Hospital, Nankai University, Tianjin, 300190, China","institution_ids":["https://openalex.org/I2800200322","https://openalex.org/I5740404","https://openalex.org/I205237279"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101638998","display_name":"Dazhi Tian","orcid":null},"institutions":[{"id":"https://openalex.org/I205237279","display_name":"Nankai University","ror":"https://ror.org/01y1kjr75","country_code":"CN","type":"education","lineage":["https://openalex.org/I205237279"]},{"id":"https://openalex.org/I5740404","display_name":"Tianjin Medical University","ror":"https://ror.org/02mh8wx89","country_code":"CN","type":"education","lineage":["https://openalex.org/I5740404"]},{"id":"https://openalex.org/I2800200322","display_name":"Tianjin First Center Hospital","ror":"https://ror.org/02ch1zb66","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I2800200322"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dazhi Tian","raw_affiliation_strings":["Organ Transplant Center, Tianjin First Central Hospital, Nankai University, Tianjin, 300190, China. TianDZ78@163.com","Organ Transplant Center, Tianjin First Central Hospital, Nankai University, Tianjin, 300190, China"],"affiliations":[{"raw_affiliation_string":"Organ Transplant Center, Tianjin First Central Hospital, Nankai University, Tianjin, 300190, China. TianDZ78@163.com","institution_ids":["https://openalex.org/I2800200322","https://openalex.org/I5740404"]},{"raw_affiliation_string":"Organ Transplant Center, Tianjin First Central Hospital, Nankai University, Tianjin, 300190, China","institution_ids":["https://openalex.org/I2800200322","https://openalex.org/I5740404","https://openalex.org/I205237279"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5101419610"],"corresponding_institution_ids":["https://openalex.org/I205237279","https://openalex.org/I2800200322","https://openalex.org/I5740404"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":3.6037,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.93148671,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"24","issue":"1","first_page":"44","last_page":"44"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10123","display_name":"DNA Repair Mechanisms","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dna-repair-protein-xrcc4","display_name":"DNA repair protein XRCC4","score":0.8818904161453247},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5876075625419617},{"id":"https://openalex.org/keywords/carcinogenesis","display_name":"Carcinogenesis","score":0.47324448823928833},{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.4722960293292999},{"id":"https://openalex.org/keywords/cancer-research","display_name":"Cancer research","score":0.4687272310256958},{"id":"https://openalex.org/keywords/dna-repair","display_name":"DNA repair","score":0.4141501188278198},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.3330516815185547},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2365952730178833},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.23655188083648682},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.21584278345108032},{"id":"https://openalex.org/keywords/dna-mismatch-repair","display_name":"DNA mismatch repair","score":0.12859156727790833}],"concepts":[{"id":"https://openalex.org/C145803527","wikidata":"https://www.wikidata.org/wiki/Q18032396","display_name":"DNA repair protein XRCC4","level":5,"score":0.8818904161453247},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5876075625419617},{"id":"https://openalex.org/C555283112","wikidata":"https://www.wikidata.org/wiki/Q1637543","display_name":"Carcinogenesis","level":3,"score":0.47324448823928833},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.4722960293292999},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.4687272310256958},{"id":"https://openalex.org/C134935766","wikidata":"https://www.wikidata.org/wiki/Q210538","display_name":"DNA repair","level":3,"score":0.4141501188278198},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.3330516815185547},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2365952730178833},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.23655188083648682},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21584278345108032},{"id":"https://openalex.org/C60748783","wikidata":"https://www.wikidata.org/wiki/Q2984243","display_name":"DNA mismatch repair","level":4,"score":0.12859156727790833}],"mesh":[{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059016","descriptor_name":"Tumor Microenvironment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-023-05165-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-023-05165-8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05165-8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36765282","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36765282","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:9921312","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9921312","pdf_url":"https://pmc.ncbi.nlm.nih.gov/articles/PMC9921312/pdf/12859_2023_Article_5165.pdf","source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:a8771f6077f14d3ea7da93e1e8064510","is_oa":true,"landing_page_url":"https://doaj.org/article/a8771f6077f14d3ea7da93e1e8064510","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 24, Iss 1, Pp 1-17 (2023)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s12859-023-05165-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-023-05165-8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-023-05165-8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.7900000214576721}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4319959416.pdf"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W1979878592","https://openalex.org/W1981752587","https://openalex.org/W1988015509","https://openalex.org/W2042699075","https://openalex.org/W2049123604","https://openalex.org/W2087290587","https://openalex.org/W2095627658","https://openalex.org/W2117692326","https://openalex.org/W2132396299","https://openalex.org/W2135076113","https://openalex.org/W2140079981","https://openalex.org/W2149441684","https://openalex.org/W2150770343","https://openalex.org/W2159482845","https://openalex.org/W2161115929","https://openalex.org/W2217477210","https://openalex.org/W2282044485","https://openalex.org/W2313562191","https://openalex.org/W2464298323","https://openalex.org/W2499850621","https://openalex.org/W2756602348","https://openalex.org/W2796448036","https://openalex.org/W2889646458","https://openalex.org/W2916517216","https://openalex.org/W2937441321","https://openalex.org/W2938725942","https://openalex.org/W2946657092","https://openalex.org/W2948658169","https://openalex.org/W2949439905","https://openalex.org/W2952406594","https://openalex.org/W3009963727","https://openalex.org/W3083776688","https://openalex.org/W3085357011","https://openalex.org/W3103119004","https://openalex.org/W3139511935","https://openalex.org/W3153631622","https://openalex.org/W3157798206","https://openalex.org/W3164666605","https://openalex.org/W3167220399","https://openalex.org/W4243043443","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W2117773532","https://openalex.org/W2921155562","https://openalex.org/W2022360527","https://openalex.org/W2010587825","https://openalex.org/W4285005552","https://openalex.org/W4387397534","https://openalex.org/W2155480439","https://openalex.org/W1986118099","https://openalex.org/W1755658704","https://openalex.org/W1998694319"],"abstract_inverted_index":{"This":[0],"comprehensive":[1],"pan-cancer":[2],"analysis":[3],"suggested":[4],"that":[5],"XRCC4":[6],"may":[7],"play":[8],"a":[9,24],"vital":[10],"role":[11],"in":[12,18,28],"the":[13,29],"prognosis":[14],"and":[15,21],"immunotherapy":[16],"response":[17],"cancer":[19],"patients,":[20],"it":[22],"is":[23],"promising":[25],"therapy":[26],"target":[27],"future.":[30]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":5}],"updated_date":"2026-04-02T15:55:50.835912","created_date":"2025-10-10T00:00:00"}
