{"id":"https://openalex.org/W4307886463","doi":"https://doi.org/10.1186/s12859-022-05001-5","title":"pSuc-EDBAM: Predicting lysine succinylation sites in proteins based on ensemble dense blocks and an attention module","display_name":"pSuc-EDBAM: Predicting lysine succinylation sites in proteins based on ensemble dense blocks and an attention module","publication_year":2022,"publication_date":"2022-10-31","ids":{"openalex":"https://openalex.org/W4307886463","doi":"https://doi.org/10.1186/s12859-022-05001-5","pmid":"https://pubmed.ncbi.nlm.nih.gov/36316638"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-022-05001-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-022-05001-5","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-05001-5","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-05001-5","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101877149","display_name":"Jianhua Jia","orcid":"https://orcid.org/0000-0003-0929-7851"},"institutions":[{"id":"https://openalex.org/I105991555","display_name":"Jingdezhen Ceramic Institute","ror":"https://ror.org/01d0jcz74","country_code":"CN","type":"education","lineage":["https://openalex.org/I105991555"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jianhua Jia","raw_affiliation_strings":["Computer Department, Jingdezhen Ceramic University, Jingdezhen, 333403, China. jjh163yx@163.com","Computer Department, Jingdezhen Ceramic University, Jingdezhen, 333403, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Department, Jingdezhen Ceramic University, Jingdezhen, 333403, China. jjh163yx@163.com","institution_ids":["https://openalex.org/I105991555"]},{"raw_affiliation_string":"Computer Department, Jingdezhen Ceramic University, Jingdezhen, 333403, China","institution_ids":["https://openalex.org/I105991555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060626678","display_name":"Genqiang Wu","orcid":"https://orcid.org/0000-0002-8624-7527"},"institutions":[{"id":"https://openalex.org/I105991555","display_name":"Jingdezhen Ceramic Institute","ror":"https://ror.org/01d0jcz74","country_code":"CN","type":"education","lineage":["https://openalex.org/I105991555"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Genqiang Wu","raw_affiliation_strings":["Computer Department, Jingdezhen Ceramic University, Jingdezhen, 333403, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Department, Jingdezhen Ceramic University, Jingdezhen, 333403, China","institution_ids":["https://openalex.org/I105991555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088456662","display_name":"Meifang Li","orcid":"https://orcid.org/0000-0002-9138-3080"},"institutions":[{"id":"https://openalex.org/I141103825","display_name":"Jiangxi University of Water Resources and Electric Power","ror":"https://ror.org/00avfj807","country_code":"CN","type":"education","lineage":["https://openalex.org/I141103825"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Meifang Li","raw_affiliation_strings":["Computer Department, Nanchang Institute of Technology, Nanchang, 330044, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Department, Nanchang Institute of Technology, Nanchang, 330044, China","institution_ids":["https://openalex.org/I141103825"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032406968","display_name":"Wang\u2010Ren Qiu","orcid":"https://orcid.org/0000-0001-7659-8553"},"institutions":[{"id":"https://openalex.org/I105991555","display_name":"Jingdezhen Ceramic Institute","ror":"https://ror.org/01d0jcz74","country_code":"CN","type":"education","lineage":["https://openalex.org/I105991555"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Wangren Qiu","raw_affiliation_strings":["Computer Department, Jingdezhen Ceramic University, Jingdezhen, 333403, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Department, Jingdezhen Ceramic University, Jingdezhen, 333403, China","institution_ids":["https://openalex.org/I105991555"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5101877149"],"corresponding_institution_ids":["https://openalex.org/I105991555"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":1.2536,"has_fulltext":true,"cited_by_count":18,"citation_normalized_percentile":{"value":0.78922253,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":97,"max":99},"biblio":{"volume":"23","issue":"1","first_page":"450","last_page":"450"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9865999817848206,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9865999817848206,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.0019000000320374966,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.0010000000474974513,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/succinylation","display_name":"Succinylation","score":0.9897606372833252},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7060412168502808},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.6028016209602356},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.548772931098938},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4698910713195801},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.452475905418396},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4482800364494324},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.4220256209373474},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4209924340248108},{"id":"https://openalex.org/keywords/lysine","display_name":"Lysine","score":0.32857823371887207},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11969703435897827}],"concepts":[{"id":"https://openalex.org/C12290205","wikidata":"https://www.wikidata.org/wiki/Q22284030","display_name":"Succinylation","level":4,"score":0.9897606372833252},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7060412168502808},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.6028016209602356},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.548772931098938},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4698910713195801},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.452475905418396},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4482800364494324},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.4220256209373474},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4209924340248108},{"id":"https://openalex.org/C2776016237","wikidata":"https://www.wikidata.org/wiki/Q178430","display_name":"Lysine","level":3,"score":0.32857823371887207},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11969703435897827},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C515207424","wikidata":"https://www.wikidata.org/wiki/Q8066","display_name":"Amino acid","level":2,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001288","descriptor_name":"Attention","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001288","descriptor_name":"Attention","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001288","descriptor_name":"Attention","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001288","descriptor_name":"Attention","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008239","descriptor_name":"Lysine","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D008239","descriptor_name":"Lysine","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D008239","descriptor_name":"Lysine","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D008239","descriptor_name":"Lysine","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019802","descriptor_name":"Succinic Acid","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D019802","descriptor_name":"Succinic Acid","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D019802","descriptor_name":"Succinic Acid","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D019802","descriptor_name":"Succinic Acid","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-022-05001-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-022-05001-5","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-05001-5","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:36316638","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/36316638","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:27779405303046b5af9326f279f693b7","is_oa":true,"landing_page_url":"https://doaj.org/article/27779405303046b5af9326f279f693b7","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 23, Iss 1, Pp 1-16 (2022)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9620660","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9620660","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-022-05001-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-022-05001-5","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-05001-5","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1045658440","display_name":null,"funder_award_id":"62162032","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1305109488","display_name":null,"funder_award_id":"20202BABL202004","funder_id":"https://openalex.org/F4320322665","funder_display_name":"Natural Science Foundation of Jiangxi Province"},{"id":"https://openalex.org/G151111082","display_name":"\u975e\u5e73\u8861\u5206\u7c7b\u6a21\u5f0f\u4e0b\u7684\u86cb\u767d\u8d28\u7ffb\u8bd1\u540e\u4fee\u9970\u4f4d\u70b9\u9884\u6d4b\u65b9\u6cd5\u7814\u7a76","funder_award_id":"61761023","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2083062581","display_name":"\u57fa\u4e8e\u4e0d\u5e73\u8861\u591a\u6807\u7b7e\u6570\u636e\u5904\u7406\u6280\u672f\u7684\u86cb\u767d\u8d28\u4fee\u9970\u82e5\u5e72\u95ee\u9898\u7814\u7a76","funder_award_id":"31760315","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2829078227","display_name":null,"funder_award_id":"GJJ190695","funder_id":"https://openalex.org/F4320325626","funder_display_name":"Education Department of Jiangxi Province"},{"id":"https://openalex.org/G290208634","display_name":null,"funder_award_id":"20202BAB202007","funder_id":"https://openalex.org/F4320325626","funder_display_name":"Education Department of Jiangxi Province"},{"id":"https://openalex.org/G2997261512","display_name":null,"funder_award_id":"20202BAB202007","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4731719168","display_name":null,"funder_award_id":"31760315","funder_id":"https://openalex.org/F4320322665","funder_display_name":"Natural Science Foundation of Jiangxi Province"},{"id":"https://openalex.org/G5299477933","display_name":null,"funder_award_id":"20202BAB202007","funder_id":"https://openalex.org/F4320322665","funder_display_name":"Natural Science Foundation of Jiangxi Province"},{"id":"https://openalex.org/G6708137188","display_name":null,"funder_award_id":"61761023","funder_id":"https://openalex.org/F4320325626","funder_display_name":"Education Department of Jiangxi Province"},{"id":"https://openalex.org/G8404147069","display_name":null,"funder_award_id":"61761023","funder_id":"https://openalex.org/F4320322665","funder_display_name":"Natural Science Foundation of Jiangxi Province"},{"id":"https://openalex.org/G998862738","display_name":null,"funder_award_id":"31760315","funder_id":"https://openalex.org/F4320325626","funder_display_name":"Education Department of Jiangxi Province"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322665","display_name":"Natural Science Foundation of Jiangxi Province","ror":null},{"id":"https://openalex.org/F4320325626","display_name":"Education Department of Jiangxi Province","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4307886463.pdf","grobid_xml":"https://content.openalex.org/works/W4307886463.grobid-xml"},"referenced_works_count":48,"referenced_works":["https://openalex.org/W1984658022","https://openalex.org/W2032738414","https://openalex.org/W2034978228","https://openalex.org/W2090008797","https://openalex.org/W2097606916","https://openalex.org/W2112796928","https://openalex.org/W2121286598","https://openalex.org/W2141818629","https://openalex.org/W2147800946","https://openalex.org/W2162002416","https://openalex.org/W2167666169","https://openalex.org/W2170505850","https://openalex.org/W2176412452","https://openalex.org/W2207892701","https://openalex.org/W2209329607","https://openalex.org/W2278741011","https://openalex.org/W2397556949","https://openalex.org/W2612240612","https://openalex.org/W2620760558","https://openalex.org/W2742750032","https://openalex.org/W2747278265","https://openalex.org/W2752782242","https://openalex.org/W2770715722","https://openalex.org/W2773645338","https://openalex.org/W2784470720","https://openalex.org/W2790179710","https://openalex.org/W2790664092","https://openalex.org/W2810675213","https://openalex.org/W2884585870","https://openalex.org/W2894836881","https://openalex.org/W2897458141","https://openalex.org/W2903682118","https://openalex.org/W2912803222","https://openalex.org/W2963420686","https://openalex.org/W2963446712","https://openalex.org/W2972955359","https://openalex.org/W2999829553","https://openalex.org/W3020537178","https://openalex.org/W3082590494","https://openalex.org/W3112889838","https://openalex.org/W3132857558","https://openalex.org/W3172422681","https://openalex.org/W4226136235","https://openalex.org/W4229021228","https://openalex.org/W4283652326","https://openalex.org/W4285743571","https://openalex.org/W4302275239","https://openalex.org/W6753412334"],"related_works":["https://openalex.org/W2563096758","https://openalex.org/W4386053843","https://openalex.org/W3158004940","https://openalex.org/W2546942002","https://openalex.org/W2972035100","https://openalex.org/W2970216048","https://openalex.org/W2167582322","https://openalex.org/W2382607599","https://openalex.org/W2742991909","https://openalex.org/W2556319748"],"abstract_inverted_index":{"BACKGROUND:":[0],"Lysine":[1],"succinylation":[2,11,162,169],"is":[3,29,174],"a":[4,42,200],"newly":[5],"discovered":[6],"protein":[7,68],"post-translational":[8],"modifications.":[9],"Predicting":[10],"sites":[12,170],"helps":[13],"investigate":[14],"the":[15,20,64,72,80,94,107,126,132,135,146,153,160,178,194,197,212],"metabolic":[16],"disease":[17],"treatments.":[18],"However,":[19],"biological":[21],"experimental":[22,114,140,198],"approaches":[23],"are":[24],"costly":[25],"and":[26,50,70,121,149,165,176],"inefficient,":[27],"it":[28],"necessary":[30],"to":[31,62,86,105],"develop":[32],"efficient":[33],"computational":[34],"approaches.":[35],"RESULTS:":[36],"In":[37],"this":[38],"paper,":[39],"we":[40],"proposed":[41],"novel":[43],"predictor":[44],"based":[45],"on":[46,125,145,152],"ensemble":[47,81],"dense":[48,82],"blocks":[49,83],"an":[51,102],"attention":[52,103],"module,":[53],"called":[54],"as":[55],"pSuc-EDBAM,":[56],"which":[57,129,182,211],"adopted":[58],"one":[59],"hot":[60],"encoding":[61],"derive":[63],"feature":[65,74,88,97],"maps":[66,75],"of":[67,96,110,142,196],"sequences,":[69],"generated":[71],"low-level":[73],"through":[76],"1-D":[77],"CNN.":[78],"Afterward,":[79],"were":[84],"used":[85],"capture":[87],"information":[89],"at":[90],"different":[91,111],"levels":[92],"in":[93],"process":[95],"learning.":[98],"We":[99],"also":[100,184],"introduced":[101],"module":[104],"evaluate":[106],"importance":[108],"degrees":[109],"features.":[112],"The":[113,139,172],"results":[115,141,214],"show":[116],"that":[117,131,157],"Acc":[118],"reaches":[119,123],"74.25%,":[120],"MCC":[122],"0.2927":[124],"testing":[127,154],"dataset,":[128],"suggest":[130],"pSuc-EDBAM":[133,158,173],"outperforms":[134,159],"existing":[136,161],"predictors.":[137],"CONCLUSIONS:":[138],"ten-fold":[143],"cross-validation":[144],"training":[147],"dataset":[148,155],"independent":[150],"test":[151],"showed":[156],"site":[163],"predictors":[164],"can":[166,215],"predict":[167],"potential":[168],"effectively.":[171],"feasible":[175],"obtains":[177],"credible":[179],"predictive":[180],"results,":[181],"may":[183],"provide":[185],"valuable":[186],"references":[187],"for":[188],"other":[189],"related":[190],"research.":[191],"To":[192],"make":[193],"convenience":[195],"scientists,":[199],"user-friendly":[201],"web":[202],"server":[203],"has":[204],"been":[205],"established":[206],"(":[207],"http://bioinfo.wugenqiang.top/pSuc-EDBAM/":[208],"),":[209],"by":[210],"desired":[213],"be":[216],"easily":[217],"obtained.":[218]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":5}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
