{"id":"https://openalex.org/W4286209704","doi":"https://doi.org/10.1186/s12859-022-04833-5","title":"Locality-sensitive hashing enables efficient and scalable signal classification in high-throughput mass spectrometry raw data","display_name":"Locality-sensitive hashing enables efficient and scalable signal classification in high-throughput mass spectrometry raw data","publication_year":2022,"publication_date":"2022-07-20","ids":{"openalex":"https://openalex.org/W4286209704","doi":"https://doi.org/10.1186/s12859-022-04833-5","pmid":"https://pubmed.ncbi.nlm.nih.gov/35858828"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-022-04833-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-022-04833-5","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-04833-5","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-04833-5","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041768359","display_name":"Konstantin Bob","orcid":"https://orcid.org/0000-0002-1929-9829"},"institutions":[{"id":"https://openalex.org/I197323543","display_name":"Johannes Gutenberg University Mainz","ror":"https://ror.org/023b0x485","country_code":"DE","type":"education","lineage":["https://openalex.org/I197323543"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Konstantin Bob","raw_affiliation_strings":["Institute of Computer Science, Johannes Gutenberg University Mainz, D-55128, Mainz, Germany","Institute of Computer Science, Johannes Gutenberg University Mainz,  Mainz, Germany"],"raw_orcid":"https://orcid.org/0000-0002-1929-9829","affiliations":[{"raw_affiliation_string":"Institute of Computer Science, Johannes Gutenberg University Mainz, D-55128, Mainz, Germany","institution_ids":["https://openalex.org/I197323543"]},{"raw_affiliation_string":"Institute of Computer Science, Johannes Gutenberg University Mainz,  Mainz, Germany","institution_ids":["https://openalex.org/I197323543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076431604","display_name":"David Teschner","orcid":"https://orcid.org/0000-0002-1755-5382"},"institutions":[{"id":"https://openalex.org/I197323543","display_name":"Johannes Gutenberg University Mainz","ror":"https://ror.org/023b0x485","country_code":"DE","type":"education","lineage":["https://openalex.org/I197323543"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"David Teschner","raw_affiliation_strings":["Institute of Computer Science, Johannes Gutenberg University Mainz, D-55128, Mainz, Germany","Institute of Computer Science, Johannes Gutenberg University Mainz,  Mainz, Germany"],"raw_orcid":"https://orcid.org/0000-0002-1755-5382","affiliations":[{"raw_affiliation_string":"Institute of Computer Science, Johannes Gutenberg University Mainz, D-55128, Mainz, Germany","institution_ids":["https://openalex.org/I197323543"]},{"raw_affiliation_string":"Institute of Computer Science, Johannes Gutenberg University Mainz,  Mainz, Germany","institution_ids":["https://openalex.org/I197323543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056265832","display_name":"Thomas Kemmer","orcid":"https://orcid.org/0000-0003-1180-746X"},"institutions":[{"id":"https://openalex.org/I197323543","display_name":"Johannes Gutenberg University Mainz","ror":"https://ror.org/023b0x485","country_code":"DE","type":"education","lineage":["https://openalex.org/I197323543"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Thomas Kemmer","raw_affiliation_strings":["Institute of Computer Science, Johannes Gutenberg University Mainz, D-55128, Mainz, Germany","Institute of Computer Science, Johannes Gutenberg University Mainz,  Mainz, Germany"],"raw_orcid":"https://orcid.org/0000-0003-1180-746X","affiliations":[{"raw_affiliation_string":"Institute of Computer Science, Johannes Gutenberg University Mainz, D-55128, Mainz, Germany","institution_ids":["https://openalex.org/I197323543"]},{"raw_affiliation_string":"Institute of Computer Science, Johannes Gutenberg University Mainz,  Mainz, Germany","institution_ids":["https://openalex.org/I197323543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063042434","display_name":"David Gomez\u2010Zepeda","orcid":"https://orcid.org/0000-0002-9467-1213"},"institutions":[{"id":"https://openalex.org/I197323543","display_name":"Johannes Gutenberg University Mainz","ror":"https://ror.org/023b0x485","country_code":"DE","type":"education","lineage":["https://openalex.org/I197323543"]},{"id":"https://openalex.org/I4210094062","display_name":"University Medical Center of the Johannes Gutenberg University Mainz","ror":"https://ror.org/00q1fsf04","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210094062"]},{"id":"https://openalex.org/I4210113347","display_name":"Helmholtz Institute Mainz","ror":"https://ror.org/024thra40","country_code":"DE","type":"government","lineage":["https://openalex.org/I1305996414","https://openalex.org/I169556180","https://openalex.org/I4210113347"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"David Gomez-Zepeda","raw_affiliation_strings":["Immunoproteomics Unit, Helmholtz-Institute for Translational Oncology (HI-TRON) Mainz, D-55131, Mainz, Germany","Institute for Immunology, University Medical Center of the Johannes Gutenberg University Mainz, D-55128, Mainz, Germany","Immunoproteomics Unit, Helmholtz-Institute for Translational Oncology (HI-TRON) Mainz, Mainz, Germany","Institute for Immunology, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany"],"raw_orcid":"https://orcid.org/0000-0002-9467-1213","affiliations":[{"raw_affiliation_string":"Immunoproteomics Unit, Helmholtz-Institute for Translational Oncology (HI-TRON) Mainz, D-55131, Mainz, Germany","institution_ids":["https://openalex.org/I4210113347"]},{"raw_affiliation_string":"Institute for Immunology, University Medical Center of the Johannes Gutenberg University Mainz, D-55128, Mainz, Germany","institution_ids":["https://openalex.org/I4210094062","https://openalex.org/I197323543"]},{"raw_affiliation_string":"Immunoproteomics Unit, Helmholtz-Institute for Translational Oncology (HI-TRON) Mainz, Mainz, Germany","institution_ids":["https://openalex.org/I4210113347"]},{"raw_affiliation_string":"Institute for Immunology, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany","institution_ids":["https://openalex.org/I4210094062","https://openalex.org/I197323543"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055066185","display_name":"Stefan Tenzer","orcid":"https://orcid.org/0000-0003-3034-0017"},"institutions":[{"id":"https://openalex.org/I197323543","display_name":"Johannes Gutenberg University Mainz","ror":"https://ror.org/023b0x485","country_code":"DE","type":"education","lineage":["https://openalex.org/I197323543"]},{"id":"https://openalex.org/I4210094062","display_name":"University Medical Center of the Johannes Gutenberg University Mainz","ror":"https://ror.org/00q1fsf04","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I4210094062"]},{"id":"https://openalex.org/I4210113347","display_name":"Helmholtz Institute Mainz","ror":"https://ror.org/024thra40","country_code":"DE","type":"government","lineage":["https://openalex.org/I1305996414","https://openalex.org/I169556180","https://openalex.org/I4210113347"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Stefan Tenzer","raw_affiliation_strings":["Immunoproteomics Unit, Helmholtz-Institute for Translational Oncology (HI-TRON) Mainz, D-55131, Mainz, Germany","Institute for Immunology, University Medical Center of the Johannes Gutenberg University Mainz, D-55128, Mainz, Germany","Institute for Immunology, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany","Immunoproteomics Unit, Helmholtz-Institute for Translational Oncology (HI-TRON) Mainz, Mainz, Germany"],"raw_orcid":"https://orcid.org/0000-0003-3034-0017","affiliations":[{"raw_affiliation_string":"Immunoproteomics Unit, Helmholtz-Institute for Translational Oncology (HI-TRON) Mainz, D-55131, Mainz, Germany","institution_ids":["https://openalex.org/I4210113347"]},{"raw_affiliation_string":"Institute for Immunology, University Medical Center of the Johannes Gutenberg University Mainz, D-55128, Mainz, Germany","institution_ids":["https://openalex.org/I4210094062","https://openalex.org/I197323543"]},{"raw_affiliation_string":"Institute for Immunology, University Medical Center of the Johannes Gutenberg University Mainz, Mainz, Germany","institution_ids":["https://openalex.org/I4210094062","https://openalex.org/I197323543"]},{"raw_affiliation_string":"Immunoproteomics Unit, Helmholtz-Institute for Translational Oncology (HI-TRON) Mainz, Mainz, Germany","institution_ids":["https://openalex.org/I4210113347"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020388832","display_name":"Bertil Schmidt","orcid":"https://orcid.org/0000-0003-2597-8331"},"institutions":[{"id":"https://openalex.org/I197323543","display_name":"Johannes Gutenberg University Mainz","ror":"https://ror.org/023b0x485","country_code":"DE","type":"education","lineage":["https://openalex.org/I197323543"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Bertil Schmidt","raw_affiliation_strings":["Institute of Computer Science, Johannes Gutenberg University Mainz, D-55128, Mainz, Germany","Institute of Computer Science, Johannes Gutenberg University Mainz,  Mainz, Germany"],"raw_orcid":"https://orcid.org/0000-0003-2597-8331","affiliations":[{"raw_affiliation_string":"Institute of Computer Science, Johannes Gutenberg University Mainz, D-55128, Mainz, Germany","institution_ids":["https://openalex.org/I197323543"]},{"raw_affiliation_string":"Institute of Computer Science, Johannes Gutenberg University Mainz,  Mainz, Germany","institution_ids":["https://openalex.org/I197323543"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5015934308","display_name":"Andreas Hildebrandt","orcid":"https://orcid.org/0000-0003-2180-6516"},"institutions":[{"id":"https://openalex.org/I197323543","display_name":"Johannes Gutenberg University Mainz","ror":"https://ror.org/023b0x485","country_code":"DE","type":"education","lineage":["https://openalex.org/I197323543"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Andreas Hildebrandt","raw_affiliation_strings":["Institute of Computer Science, Johannes Gutenberg University Mainz, D-55128, Mainz, Germany. andreas.hildebrandt@uni-mainz.de","Institute of Computer Science, Johannes Gutenberg University Mainz,  Mainz, Germany"],"raw_orcid":"https://orcid.org/0000-0003-2180-6516","affiliations":[{"raw_affiliation_string":"Institute of Computer Science, Johannes Gutenberg University Mainz, D-55128, Mainz, Germany. andreas.hildebrandt@uni-mainz.de","institution_ids":["https://openalex.org/I197323543"]},{"raw_affiliation_string":"Institute of Computer Science, Johannes Gutenberg University Mainz,  Mainz, Germany","institution_ids":["https://openalex.org/I197323543"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5015934308"],"corresponding_institution_ids":["https://openalex.org/I197323543"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1825,"currency":"EUR","value_usd":1968},"fwci":0.1106,"has_fulltext":true,"cited_by_count":1,"citation_normalized_percentile":{"value":0.40906631,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"23","issue":"1","first_page":"287","last_page":"287"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.8633000254631042,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.8633000254631042,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10683","display_name":"Mass Spectrometry Techniques and Applications","score":0.05249999836087227,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.02419999986886978,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7330495119094849},{"id":"https://openalex.org/keywords/raw-data","display_name":"Raw data","score":0.6660643815994263},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.5970748066902161},{"id":"https://openalex.org/keywords/locality-sensitive-hashing","display_name":"Locality-sensitive hashing","score":0.5445998907089233},{"id":"https://openalex.org/keywords/mass-spectrometry","display_name":"Mass spectrometry","score":0.4983375072479248},{"id":"https://openalex.org/keywords/hash-function","display_name":"Hash function","score":0.49513307213783264},{"id":"https://openalex.org/keywords/thresholding","display_name":"Thresholding","score":0.481810986995697},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37447211146354675},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.26030921936035156},{"id":"https://openalex.org/keywords/hash-table","display_name":"Hash table","score":0.24646496772766113},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.19492080807685852},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.17399197816848755}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7330495119094849},{"id":"https://openalex.org/C132964779","wikidata":"https://www.wikidata.org/wiki/Q2110223","display_name":"Raw data","level":2,"score":0.6660643815994263},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.5970748066902161},{"id":"https://openalex.org/C74270461","wikidata":"https://www.wikidata.org/wiki/Q1625299","display_name":"Locality-sensitive hashing","level":4,"score":0.5445998907089233},{"id":"https://openalex.org/C162356407","wikidata":"https://www.wikidata.org/wiki/Q180809","display_name":"Mass spectrometry","level":2,"score":0.4983375072479248},{"id":"https://openalex.org/C99138194","wikidata":"https://www.wikidata.org/wiki/Q183427","display_name":"Hash function","level":2,"score":0.49513307213783264},{"id":"https://openalex.org/C191178318","wikidata":"https://www.wikidata.org/wiki/Q2256906","display_name":"Thresholding","level":3,"score":0.481810986995697},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37447211146354675},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.26030921936035156},{"id":"https://openalex.org/C67388219","wikidata":"https://www.wikidata.org/wiki/Q207440","display_name":"Hash table","level":3,"score":0.24646496772766113},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.19492080807685852},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.17399197816848755},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-022-04833-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-022-04833-5","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-04833-5","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35858828","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35858828","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:7fbe9bcd7cb8405d93beb2c2c61ca1d5","is_oa":true,"landing_page_url":"https://doaj.org/article/7fbe9bcd7cb8405d93beb2c2c61ca1d5","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 23, Iss 1, Pp 1-16 (2022)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9301846","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9301846","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-022-04833-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-022-04833-5","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-04833-5","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1066603021","display_name":"HySim: Hybridparallele \u00c4hnlichkeitssuche f\u00fcr die Analyse gro\u00dfer genomischer und proteomischer Daten","funder_award_id":"329350978","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G2391303119","display_name":null,"funder_award_id":"031L0217A","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G2595011484","display_name":null,"funder_award_id":"031L0217B","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G8506890840","display_name":null,"funder_award_id":"031L0217A/B","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4286209704.pdf","grobid_xml":"https://content.openalex.org/works/W4286209704.grobid-xml"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W111509594","https://openalex.org/W188370263","https://openalex.org/W1579534339","https://openalex.org/W1977290961","https://openalex.org/W2006869437","https://openalex.org/W2010399703","https://openalex.org/W2012833704","https://openalex.org/W2015732856","https://openalex.org/W2023096047","https://openalex.org/W2037199116","https://openalex.org/W2056666869","https://openalex.org/W2066138347","https://openalex.org/W2080752012","https://openalex.org/W2086502504","https://openalex.org/W2094889803","https://openalex.org/W2121418514","https://openalex.org/W2130729839","https://openalex.org/W2147717514","https://openalex.org/W2154802890","https://openalex.org/W2220258027","https://openalex.org/W2308569764","https://openalex.org/W2465480251","https://openalex.org/W2469486851","https://openalex.org/W2745994342","https://openalex.org/W2901011101","https://openalex.org/W2952261448","https://openalex.org/W2952907530","https://openalex.org/W2959428074","https://openalex.org/W2990072002","https://openalex.org/W3010753112","https://openalex.org/W3025057718","https://openalex.org/W3033804171","https://openalex.org/W3093062675","https://openalex.org/W3136321589"],"related_works":["https://openalex.org/W1542224353","https://openalex.org/W1661087619","https://openalex.org/W2116854923","https://openalex.org/W2750730210","https://openalex.org/W2236974868","https://openalex.org/W2000601968","https://openalex.org/W2144265691","https://openalex.org/W2033383639","https://openalex.org/W3108918257","https://openalex.org/W3016124764"],"abstract_inverted_index":{"BACKGROUND:":[0],"Mass":[1],"spectrometry":[2,18,64,102,171],"is":[3,92,114,162,186],"an":[4,130],"important":[5],"experimental":[6],"technique":[7],"in":[8,100,169],"the":[9,55,67,84],"field":[10],"of":[11,15,23,35,42,50,62,110],"proteomics.":[12],"However,":[13],"analysis":[14],"certain":[16],"mass":[17,63,101,170],"data":[19,38,65,104,137,176,185],"faces":[20],"a":[21,28,32,125,163],"combination":[22],"two":[24],"challenges:":[25],"first,":[26],"even":[27],"single":[29,46],"experiment":[30],"produces":[31],"large":[33],"amount":[34,61],"multi-dimensional":[36],"raw":[37,103,172],"and,":[39],"second,":[40],"signals":[41,85],"interest":[43],"are":[44,179],"not":[45],"peaks":[47,51],"but":[48],"patterns":[49],"that":[52,94],"span":[53],"along":[54],"different":[56],"dimensions.":[57],"The":[58],"rapidly":[59],"growing":[60],"increases":[66],"demand":[68],"for":[69,75,166],"scalable":[70],"solutions.":[71],"Furthermore,":[72],"existing":[73],"approaches":[74],"signal":[76,98,167],"detection":[77],"usually":[78],"rely":[79],"on":[80],"strong":[81],"assumptions":[82],"concerning":[83],"properties.":[86],"RESULTS:":[87],"In":[88],"this":[89],"study,":[90],"it":[91,113],"shown":[93],"locality-sensitive":[95],"hashing":[96,161],"enables":[97],"classification":[99,168],"at":[105,181,188],"scale.":[106],"Through":[107],"appropriate":[108],"choice":[109],"algorithm":[111],"parameters":[112],"possible":[115],"to":[116,129,151],"balance":[117],"false-positive":[118],"and":[119,154,177],"false-negative":[120],"rates.":[121],"On":[122],"synthetic":[123],"data,":[124],"superior":[126],"performance":[127],"compared":[128],"intensity":[131],"thresholding":[132],"approach":[133,165],"was":[134],"achieved.":[135],"Real":[136],"could":[138],"be":[139],"strongly":[140],"reduced":[141],"without":[142],"losing":[143],"relevant":[144],"information.":[145],"Our":[146],"implementation":[147],"scaled":[148],"out":[149],"up":[150],"32":[152],"threads":[153],"supports":[155],"acceleration":[156],"by":[157],"GPUs.":[158],"CONCLUSIONS:":[159],"Locality-sensitive":[160],"desirable":[164],"data.":[173],"AVAILABILITY:":[174],"Generated":[175],"code":[178],"available":[180,187],"https://github.com/hildebrandtlab/mzBucket":[182],".":[183,190],"Raw":[184],"https://zenodo.org/record/5036526":[189]},"counts_by_year":[{"year":2023,"cited_by_count":1}],"updated_date":"2026-06-22T08:00:12.763002","created_date":"2025-10-10T00:00:00"}
