{"id":"https://openalex.org/W4281660412","doi":"https://doi.org/10.1186/s12859-022-04739-2","title":"An equivalence test between features lists, based on the Sorensen\u2013Dice index and the joint frequencies of GO term enrichment","display_name":"An equivalence test between features lists, based on the Sorensen\u2013Dice index and the joint frequencies of GO term enrichment","publication_year":2022,"publication_date":"2022-05-31","ids":{"openalex":"https://openalex.org/W4281660412","doi":"https://doi.org/10.1186/s12859-022-04739-2","pmid":"https://pubmed.ncbi.nlm.nih.gov/35641928"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-022-04739-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-022-04739-2","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-04739-2","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-04739-2","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049930021","display_name":"Pablo Flores","orcid":"https://orcid.org/0000-0002-7156-8547"},"institutions":[{"id":"https://openalex.org/I4210137344","display_name":"Escuela Superior Polit\u00e9cnica del Chimborazo","ror":"https://ror.org/02zyw2q61","country_code":"EC","type":"education","lineage":["https://openalex.org/I4210137344"]}],"countries":["EC"],"is_corresponding":true,"raw_author_name":"Pablo Flores","raw_affiliation_strings":["Department of Statistics and Operational Research, Faculty of Mathematics and Statistics, Universitat Polit\u00e8cnica de Catalunya, Barcelona, Spain. p_flores@espoch.edu.ec","Escuela Superior Polit\u00e9cnica de Chimborazo (ESPOCH), Research Group in Data Science CIDED, Panamericana Sur Km 1 1/2, Riobamba, Ecuador. p_flores@espoch.edu.ec","Escuela Superior Polit\u00e9cnica de Chimborazo (ESPOCH), Research Group in Data Science CIDED, Panamericana Sur Km 1 1/2, Riobamba, Ecuador"],"affiliations":[{"raw_affiliation_string":"Department of Statistics and Operational Research, Faculty of Mathematics and Statistics, Universitat Polit\u00e8cnica de Catalunya, Barcelona, Spain. p_flores@espoch.edu.ec","institution_ids":[]},{"raw_affiliation_string":"Escuela Superior Polit\u00e9cnica de Chimborazo (ESPOCH), Research Group in Data Science CIDED, Panamericana Sur Km 1 1/2, Riobamba, Ecuador. p_flores@espoch.edu.ec","institution_ids":[]},{"raw_affiliation_string":"Escuela Superior Polit\u00e9cnica de Chimborazo (ESPOCH), Research Group in Data Science CIDED, Panamericana Sur Km 1 1/2, Riobamba, Ecuador","institution_ids":["https://openalex.org/I4210137344"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081149067","display_name":"Miquel Salicr\u00fa","orcid":"https://orcid.org/0000-0001-9644-5626"},"institutions":[{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Miquel Salicr\u00fa","raw_affiliation_strings":["Department of Genetics, Microbiology and Statistics, Statistics Section, Universitat de Barcelona, Av. Diagonal 643, 08028, Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Genetics, Microbiology and Statistics, Statistics Section, Universitat de Barcelona, Av. Diagonal 643, 08028, Barcelona, Spain","institution_ids":["https://openalex.org/I71999127"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075738659","display_name":"\u00c1lex S\u00e1nchez\u2010Pla","orcid":"https://orcid.org/0000-0002-8673-7737"},"institutions":[{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Alex S\u00e1nchez-Pla","raw_affiliation_strings":["Department of Genetics, Microbiology and Statistics, Statistics Section, Universitat de Barcelona, Av. Diagonal 643, 08028, Barcelona, Spain","Statistics and Bioinformatics Unit, Vall d'Hebron Institute of Research (VHIR), Vall d'Hebron 119-129, 08035, Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Genetics, Microbiology and Statistics, Statistics Section, Universitat de Barcelona, Av. Diagonal 643, 08028, Barcelona, Spain","institution_ids":["https://openalex.org/I71999127"]},{"raw_affiliation_string":"Statistics and Bioinformatics Unit, Vall d'Hebron Institute of Research (VHIR), Vall d'Hebron 119-129, 08035, Barcelona, Spain","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023254936","display_name":"Jordi Oca\u00f1a","orcid":"https://orcid.org/0000-0002-4736-6996"},"institutions":[{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jordi Oca\u00f1a","raw_affiliation_strings":["Department of Genetics, Microbiology and Statistics, Statistics Section, Universitat de Barcelona, Av. Diagonal 643, 08028, Barcelona, Spain"],"affiliations":[{"raw_affiliation_string":"Department of Genetics, Microbiology and Statistics, Statistics Section, Universitat de Barcelona, Av. Diagonal 643, 08028, Barcelona, Spain","institution_ids":["https://openalex.org/I71999127"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5049930021"],"corresponding_institution_ids":["https://openalex.org/I4210137344"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.1736,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.47164187,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":98},"biblio":{"volume":"23","issue":"1","first_page":"207","last_page":"207"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dice","display_name":"Dice","score":0.77137291431427},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5856462717056274},{"id":"https://openalex.org/keywords/equivalence","display_name":"Equivalence (formal languages)","score":0.5566911697387695},{"id":"https://openalex.org/keywords/statistic","display_name":"Statistic","score":0.4919106960296631},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.39998191595077515},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3396402597427368},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.33341971039772034},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.2825216054916382},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.24493560194969177}],"concepts":[{"id":"https://openalex.org/C22029948","wikidata":"https://www.wikidata.org/wiki/Q45089","display_name":"Dice","level":2,"score":0.77137291431427},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5856462717056274},{"id":"https://openalex.org/C2780069185","wikidata":"https://www.wikidata.org/wiki/Q7977945","display_name":"Equivalence (formal languages)","level":2,"score":0.5566911697387695},{"id":"https://openalex.org/C89128539","wikidata":"https://www.wikidata.org/wiki/Q1949963","display_name":"Statistic","level":2,"score":0.4919106960296631},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.39998191595077515},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3396402597427368},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.33341971039772034},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.2825216054916382},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.24493560194969177},{"id":"https://openalex.org/C118615104","wikidata":"https://www.wikidata.org/wiki/Q121416","display_name":"Discrete mathematics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007668","descriptor_name":"Kidney","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007668","descriptor_name":"Kidney","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007668","descriptor_name":"Kidney","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-022-04739-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-022-04739-2","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-04739-2","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35641928","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35641928","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:diposit.ub.edu:2445/193128","is_oa":true,"landing_page_url":"http://hdl.handle.net/2445/193128","pdf_url":null,"source":{"id":"https://openalex.org/S4306401653","display_name":"Dip\u00f2sit Digital de la Universitat de Barcelona (Universitat de Barcelona)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I71999127","host_organization_name":"Universitat de Barcelona","host_organization_lineage":["https://openalex.org/I71999127"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Articles publicats en revistes (Gen\u00e8tica, Microbiologia i Estad\u00edstica)","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:doaj.org/article:af44a41a75ed41a8a128a680f28e4c3d","is_oa":true,"landing_page_url":"https://doaj.org/article/af44a41a75ed41a8a128a680f28e4c3d","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 23, Iss 1, Pp 1-21 (2022)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:9158181","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/9158181","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-022-04739-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-022-04739-2","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-04739-2","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1650125035","display_name":null,"funder_award_id":"B-I00","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G3690828678","display_name":null,"funder_award_id":"PID2019","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G4378406616","display_name":null,"funder_award_id":"PID2019-104830RB-I00","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G7425137858","display_name":null,"funder_award_id":"PID2019","funder_id":"https://openalex.org/F4320321505","funder_display_name":"Generalitat de Catalunya"}],"funders":[{"id":"https://openalex.org/F4320321505","display_name":"Generalitat de Catalunya","ror":"https://ror.org/01bg62x04"},{"id":"https://openalex.org/F4320322930","display_name":"Ministerio de Ciencia e Innovaci\u00f3n","ror":"https://ror.org/034900433"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4281660412.pdf","grobid_xml":"https://content.openalex.org/works/W4281660412.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W1535641839","https://openalex.org/W1967904959","https://openalex.org/W1972988297","https://openalex.org/W2011034758","https://openalex.org/W2021560569","https://openalex.org/W2035618305","https://openalex.org/W2044819261","https://openalex.org/W2061093976","https://openalex.org/W2100761975","https://openalex.org/W2100980426","https://openalex.org/W2101272820","https://openalex.org/W2103017472","https://openalex.org/W2110065044","https://openalex.org/W2112348586","https://openalex.org/W2130410032","https://openalex.org/W2147140100","https://openalex.org/W2345152897","https://openalex.org/W2480935928","https://openalex.org/W2548028586","https://openalex.org/W2889056506","https://openalex.org/W2970625335","https://openalex.org/W3002402252","https://openalex.org/W3112600195"],"related_works":["https://openalex.org/W3104750253","https://openalex.org/W3021239166","https://openalex.org/W2586273397","https://openalex.org/W2390936256","https://openalex.org/W2483429559","https://openalex.org/W2016385589","https://openalex.org/W2009559548","https://openalex.org/W2890643743","https://openalex.org/W4366341510","https://openalex.org/W2906397153"],"abstract_inverted_index":{"The":[0],"accuracy":[1],"of":[2,9,26,35],"these":[3],"tests":[4],"is":[5,15],"studied":[6],"by":[7,17],"means":[8],"simulation":[10],"and":[11,32],"their":[12],"possible":[13],"interest":[14],"illustrated":[16],"using":[18],"them":[19],"over":[20],"two":[21],"real":[22],"datasets:":[23],"A":[24],"collection":[25,34],"gene":[27,36],"lists":[28,37],"related":[29,38],"to":[30,39],"cancer":[31],"a":[33],"kidney":[40],"rejection":[41],"after":[42],"transplantation.":[43]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
