{"id":"https://openalex.org/W4213131528","doi":"https://doi.org/10.1186/s12859-022-04598-x","title":"Efficient link prediction in the protein\u2013protein interaction network using topological information in a generative adversarial network machine learning model","display_name":"Efficient link prediction in the protein\u2013protein interaction network using topological information in a generative adversarial network machine learning model","publication_year":2022,"publication_date":"2022-02-19","ids":{"openalex":"https://openalex.org/W4213131528","doi":"https://doi.org/10.1186/s12859-022-04598-x","pmid":"https://pubmed.ncbi.nlm.nih.gov/35183129"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-022-04598-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-022-04598-x","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-022-04598-x","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-022-04598-x","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037884483","display_name":"Oliv\u00e9r M. Balogh","orcid":"https://orcid.org/0000-0002-6296-6383"},"institutions":[{"id":"https://openalex.org/I101202996","display_name":"Semmelweis University","ror":"https://ror.org/01g9ty582","country_code":"HU","type":"education","lineage":["https://openalex.org/I101202996"]},{"id":"https://openalex.org/I31882830","display_name":"P\u00e1zm\u00e1ny P\u00e9ter Catholic University","ror":"https://ror.org/05v9kya57","country_code":"HU","type":"education","lineage":["https://openalex.org/I31882830"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Oliv\u00e9r M. Balogh","raw_affiliation_strings":["Cardiometabolic and MTA-SE System Pharmacology Research Group, Department of Pharmacology and Pharmacotherapy, Semmelweis University, Nagyv\u00e1rad t\u00e9r 4, Budapest, 1089, Hungary","Faculty of Information Technology and Bionics, P\u00e1zm\u00e1ny P\u00e9ter Catholic University, Budapest, Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cardiometabolic and MTA-SE System Pharmacology Research Group, Department of Pharmacology and Pharmacotherapy, Semmelweis University, Nagyv\u00e1rad t\u00e9r 4, Budapest, 1089, Hungary","institution_ids":["https://openalex.org/I101202996"]},{"raw_affiliation_string":"Faculty of Information Technology and Bionics, P\u00e1zm\u00e1ny P\u00e9ter Catholic University, Budapest, Hungary","institution_ids":["https://openalex.org/I31882830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023784007","display_name":"Bettina Benczik","orcid":"https://orcid.org/0000-0003-0379-2181"},"institutions":[{"id":"https://openalex.org/I101202996","display_name":"Semmelweis University","ror":"https://ror.org/01g9ty582","country_code":"HU","type":"education","lineage":["https://openalex.org/I101202996"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Bettina Benczik","raw_affiliation_strings":["Cardiometabolic and MTA-SE System Pharmacology Research Group, Department of Pharmacology and Pharmacotherapy, Semmelweis University, Nagyv\u00e1rad t\u00e9r 4, Budapest, 1089, Hungary","Pharmahungary Group, Szeged, Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cardiometabolic and MTA-SE System Pharmacology Research Group, Department of Pharmacology and Pharmacotherapy, Semmelweis University, Nagyv\u00e1rad t\u00e9r 4, Budapest, 1089, Hungary","institution_ids":["https://openalex.org/I101202996"]},{"raw_affiliation_string":"Pharmahungary Group, Szeged, Hungary","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055547076","display_name":"Andr\u00e1s Horv\u00e1th","orcid":"https://orcid.org/0000-0002-8210-545X"},"institutions":[{"id":"https://openalex.org/I31882830","display_name":"P\u00e1zm\u00e1ny P\u00e9ter Catholic University","ror":"https://ror.org/05v9kya57","country_code":"HU","type":"education","lineage":["https://openalex.org/I31882830"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"Andr\u00e1s Horv\u00e1th","raw_affiliation_strings":["Faculty of Information Technology and Bionics, P\u00e1zm\u00e1ny P\u00e9ter Catholic University, Budapest, Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Information Technology and Bionics, P\u00e1zm\u00e1ny P\u00e9ter Catholic University, Budapest, Hungary","institution_ids":["https://openalex.org/I31882830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041459223","display_name":"M\u00e1ty\u00e1s P\u00e9terv\u00e1ri","orcid":"https://orcid.org/0000-0002-4816-0746"},"institutions":[{"id":"https://openalex.org/I101202996","display_name":"Semmelweis University","ror":"https://ror.org/01g9ty582","country_code":"HU","type":"education","lineage":["https://openalex.org/I101202996"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"M\u00e1ty\u00e1s P\u00e9terv\u00e1ri","raw_affiliation_strings":["Cardiometabolic and MTA-SE System Pharmacology Research Group, Department of Pharmacology and Pharmacotherapy, Semmelweis University, Nagyv\u00e1rad t\u00e9r 4, Budapest, 1089, Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cardiometabolic and MTA-SE System Pharmacology Research Group, Department of Pharmacology and Pharmacotherapy, Semmelweis University, Nagyv\u00e1rad t\u00e9r 4, Budapest, 1089, Hungary","institution_ids":["https://openalex.org/I101202996"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081215274","display_name":"P\u00e9ter Csermely","orcid":"https://orcid.org/0000-0001-9234-0659"},"institutions":[{"id":"https://openalex.org/I101202996","display_name":"Semmelweis University","ror":"https://ror.org/01g9ty582","country_code":"HU","type":"education","lineage":["https://openalex.org/I101202996"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"P\u00e9ter Csermely","raw_affiliation_strings":["Department of Molecular Biology, Semmelweis University, Budapest, Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology, Semmelweis University, Budapest, Hungary","institution_ids":["https://openalex.org/I101202996"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026696245","display_name":"P\u00e9ter Ferdinandy","orcid":"https://orcid.org/0000-0002-6424-6806"},"institutions":[{"id":"https://openalex.org/I101202996","display_name":"Semmelweis University","ror":"https://ror.org/01g9ty582","country_code":"HU","type":"education","lineage":["https://openalex.org/I101202996"]}],"countries":["HU"],"is_corresponding":false,"raw_author_name":"P\u00e9ter Ferdinandy","raw_affiliation_strings":["Cardiometabolic and MTA-SE System Pharmacology Research Group, Department of Pharmacology and Pharmacotherapy, Semmelweis University, Nagyv\u00e1rad t\u00e9r 4, Budapest, 1089, Hungary","Pharmahungary Group, Szeged, Hungary"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cardiometabolic and MTA-SE System Pharmacology Research Group, Department of Pharmacology and Pharmacotherapy, Semmelweis University, Nagyv\u00e1rad t\u00e9r 4, Budapest, 1089, Hungary","institution_ids":["https://openalex.org/I101202996"]},{"raw_affiliation_string":"Pharmahungary Group, Szeged, Hungary","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010421039","display_name":"Bence \u00c1gg","orcid":"https://orcid.org/0000-0002-6492-0426"},"institutions":[{"id":"https://openalex.org/I101202996","display_name":"Semmelweis University","ror":"https://ror.org/01g9ty582","country_code":"HU","type":"education","lineage":["https://openalex.org/I101202996"]},{"id":"https://openalex.org/I227486990","display_name":"University of Szeged","ror":"https://ror.org/01pnej532","country_code":"HU","type":"education","lineage":["https://openalex.org/I227486990"]}],"countries":["HU"],"is_corresponding":true,"raw_author_name":"Bence \u00c1gg","raw_affiliation_strings":["Cardiometabolic and MTA-SE System Pharmacology Research Group, Department of Pharmacology and Pharmacotherapy, Semmelweis University, Nagyv\u00e1rad t\u00e9r 4, Budapest, 1089, Hungary. agg.bence@med.semmelweis-univ.hu","Pharmahungary Group, Szeged, Hungary. agg.bence@med.semmelweis-univ.hu","Pharmahungary Group, Szeged, Hungary"],"raw_orcid":"https://orcid.org/0000-0002-6492-0426","affiliations":[{"raw_affiliation_string":"Cardiometabolic and MTA-SE System Pharmacology Research Group, Department of Pharmacology and Pharmacotherapy, Semmelweis University, Nagyv\u00e1rad t\u00e9r 4, Budapest, 1089, Hungary. agg.bence@med.semmelweis-univ.hu","institution_ids":["https://openalex.org/I101202996"]},{"raw_affiliation_string":"Pharmahungary Group, Szeged, Hungary. agg.bence@med.semmelweis-univ.hu","institution_ids":["https://openalex.org/I101202996","https://openalex.org/I227486990"]},{"raw_affiliation_string":"Pharmahungary Group, Szeged, Hungary","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5010421039"],"corresponding_institution_ids":["https://openalex.org/I101202996","https://openalex.org/I227486990"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":2.5855,"has_fulltext":true,"cited_by_count":34,"citation_normalized_percentile":{"value":0.90905595,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"23","issue":"1","first_page":"78","last_page":"78"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9574999809265137,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9574999809265137,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.01940000057220459,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.0031999999191612005,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7466886043548584},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5784051418304443},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.5448775291442871},{"id":"https://openalex.org/keywords/network-topology","display_name":"Network topology","score":0.47550851106643677},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.45221248269081116},{"id":"https://openalex.org/keywords/traverse","display_name":"Traverse","score":0.45056337118148804},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.43481892347335815},{"id":"https://openalex.org/keywords/generator","display_name":"Generator (circuit theory)","score":0.43331605195999146},{"id":"https://openalex.org/keywords/power","display_name":"Power (physics)","score":0.1299862265586853}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7466886043548584},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5784051418304443},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.5448775291442871},{"id":"https://openalex.org/C199845137","wikidata":"https://www.wikidata.org/wiki/Q145490","display_name":"Network topology","level":2,"score":0.47550851106643677},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.45221248269081116},{"id":"https://openalex.org/C176809094","wikidata":"https://www.wikidata.org/wiki/Q15401496","display_name":"Traverse","level":2,"score":0.45056337118148804},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.43481892347335815},{"id":"https://openalex.org/C2780992000","wikidata":"https://www.wikidata.org/wiki/Q17016113","display_name":"Generator (circuit theory)","level":3,"score":0.43331605195999146},{"id":"https://openalex.org/C163258240","wikidata":"https://www.wikidata.org/wiki/Q25342","display_name":"Power (physics)","level":2,"score":0.1299862265586853},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-022-04598-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-022-04598-x","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-022-04598-x","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35183129","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35183129","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:073a4946c6fc4ab9b241d4a342eb150c","is_oa":true,"landing_page_url":"https://doaj.org/article/073a4946c6fc4ab9b241d4a342eb150c","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 23, Iss 1, Pp 1-19 (2022)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8858570","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8858570","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-022-04598-x","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-022-04598-x","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-022-04598-x","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1008830717","display_name":null,"funder_award_id":"\u00daNKP-21-4-II-SE-18","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G1295621590","display_name":null,"funder_award_id":"TKP2021-EGA","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G134384773","display_name":null,"funder_award_id":"TKP2021","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G1748904351","display_name":null,"funder_award_id":"\u00daNKP-20-4","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G1755966364","display_name":null,"funder_award_id":"NVKP-16-1-2016-0017","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G1937741498","display_name":null,"funder_award_id":"\u00daNKP-20-4-I-SE-7","funder_id":"https://openalex.org/F4320328991","funder_display_name":"Innov\u00e1ci\u00f3s \u00e9s Technol\u00f3giai Miniszt\u00e9rium"},{"id":"https://openalex.org/G2219535755","display_name":null,"funder_award_id":"NVKP-16-1-2016-0017","funder_id":"https://openalex.org/F4320336675","funder_display_name":"National Research, Development and Innovation Office"},{"id":"https://openalex.org/G2324054382","display_name":null,"funder_award_id":"TKP2021-EGA-24","funder_id":"https://openalex.org/F4320321102","funder_display_name":"Semmelweis Egyetem"},{"id":"https://openalex.org/G2519277827","display_name":null,"funder_award_id":"EFOP-3.6.3-VEKOP-16-2017-00009","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G2549988519","display_name":null,"funder_award_id":"2020-4.1.1.-TKP2020","funder_id":"https://openalex.org/F4320321102","funder_display_name":"Semmelweis Egyetem"},{"id":"https://openalex.org/G2744728761","display_name":null,"funder_award_id":"TKP2020","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G2760824959","display_name":null,"funder_award_id":"EFOP-3.6.3","funder_id":"https://openalex.org/F4320321102","funder_display_name":"Semmelweis Egyetem"},{"id":"https://openalex.org/G2841045876","display_name":null,"funder_award_id":"K131458","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G298428782","display_name":null,"funder_award_id":"TKP2021","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G3009961736","display_name":null,"funder_award_id":"EFOP-3.6.3-VEKOP-16-2017-00009","funder_id":"https://openalex.org/F4320328991","funder_display_name":"Innov\u00e1ci\u00f3s \u00e9s Technol\u00f3giai Miniszt\u00e9rium"},{"id":"https://openalex.org/G3336180873","display_name":null,"funder_award_id":"\u00daNKP-20-4","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G336876529","display_name":null,"funder_award_id":"\u00daNKP-21-4","funder_id":"https://openalex.org/F4320328991","funder_display_name":"Innov\u00e1ci\u00f3s \u00e9s Technol\u00f3giai Miniszt\u00e9rium"},{"id":"https://openalex.org/G3413008483","display_name":null,"funder_award_id":"2020-4.1.1","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G3744551884","display_name":null,"funder_award_id":"TKP2021-EGA-24","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G4501170364","display_name":null,"funder_award_id":"\u00daNKP-21-4-II","funder_id":"https://openalex.org/F4320336675","funder_display_name":"National Research, Development and Innovation Office"},{"id":"https://openalex.org/G4634923391","display_name":null,"funder_award_id":"\u00daNKP-20-4-I","funder_id":"https://openalex.org/F4320328991","funder_display_name":"Innov\u00e1ci\u00f3s \u00e9s Technol\u00f3giai Miniszt\u00e9rium"},{"id":"https://openalex.org/G4832065709","display_name":null,"funder_award_id":"\u00daNKP-20-4","funder_id":"https://openalex.org/F4320336675","funder_display_name":"National Research, Development and Innovation Office"},{"id":"https://openalex.org/G4862200628","display_name":null,"funder_award_id":"TKP2021-EGA-24","funder_id":"https://openalex.org/F4320336675","funder_display_name":"National Research, Development and Innovation Office"},{"id":"https://openalex.org/G4931760938","display_name":null,"funder_award_id":"NVKP-16-1-2016-0017","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G4951209685","display_name":null,"funder_award_id":"NKFIA; NVKP-16-1-2016-0017","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G5380163490","display_name":null,"funder_award_id":"2020-4.1.1.-TKP2020","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G5454420093","display_name":null,"funder_award_id":"2020-4.1.1.-TKP2020","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G5489890681","display_name":null,"funder_award_id":"TKP2021","funder_id":"https://openalex.org/F4320328991","funder_display_name":"Innov\u00e1ci\u00f3s \u00e9s Technol\u00f3giai Miniszt\u00e9rium"},{"id":"https://openalex.org/G5511846599","display_name":null,"funder_award_id":"\u00daNKP-20","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G5747343190","display_name":null,"funder_award_id":"TKP2021-EGA-24","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G5852108740","display_name":null,"funder_award_id":"TKP2021-EGA-24","funder_id":"https://openalex.org/F4320328991","funder_display_name":"Innov\u00e1ci\u00f3s \u00e9s Technol\u00f3giai Miniszt\u00e9rium"},{"id":"https://openalex.org/G5863065833","display_name":null,"funder_award_id":"EFOP-3.6.3-VEKOP-16-2017-00009","funder_id":"https://openalex.org/F4320321102","funder_display_name":"Semmelweis Egyetem"},{"id":"https://openalex.org/G5981160513","display_name":null,"funder_award_id":"TKP2021-EGA","funder_id":"https://openalex.org/F4320336675","funder_display_name":"National Research, Development and Innovation Office"},{"id":"https://openalex.org/G603472522","display_name":null,"funder_award_id":"2020-4.1.1","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G6420385980","display_name":null,"funder_award_id":"TKP2020","funder_id":"https://openalex.org/F4320328991","funder_display_name":"Innov\u00e1ci\u00f3s \u00e9s Technol\u00f3giai Miniszt\u00e9rium"},{"id":"https://openalex.org/G6645712249","display_name":null,"funder_award_id":"\u00daNKP-20-4-I-SE-7","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G7015593406","display_name":null,"funder_award_id":"TKP2020","funder_id":"https://openalex.org/F4320336675","funder_display_name":"National Research, Development and Innovation Office"},{"id":"https://openalex.org/G7030559698","display_name":null,"funder_award_id":"2020-4.1.1.-TKP2020","funder_id":"https://openalex.org/F4320336675","funder_display_name":"National Research, Development and Innovation Office"},{"id":"https://openalex.org/G7197185223","display_name":null,"funder_award_id":"\u00daNKP-21-4-II-SE-18","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G7233927407","display_name":null,"funder_award_id":"\u00daNKP-20-4","funder_id":"https://openalex.org/F4320328991","funder_display_name":"Innov\u00e1ci\u00f3s \u00e9s Technol\u00f3giai Miniszt\u00e9rium"},{"id":"https://openalex.org/G7269143174","display_name":null,"funder_award_id":"TKP2020","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G7295324402","display_name":null,"funder_award_id":"\u00daNKP-21-4","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G7496402036","display_name":null,"funder_award_id":"EFOP-3.6.3-VEKOP-16-2017-00009","funder_id":"https://openalex.org/F4320336675","funder_display_name":"National Research, Development and Innovation Office"},{"id":"https://openalex.org/G7596933463","display_name":null,"funder_award_id":"TKP2021-EGA","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G8059423480","display_name":null,"funder_award_id":"NVKP-16-1-2016-0017 National Heart Program","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G8090288322","display_name":null,"funder_award_id":"TKP2021","funder_id":"https://openalex.org/F4320336675","funder_display_name":"National Research, Development and Innovation Office"},{"id":"https://openalex.org/G8117474633","display_name":null,"funder_award_id":"\u00daNKP-21-4-II","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G87370735","display_name":null,"funder_award_id":"\u00daNKP-21-4","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G8749902441","display_name":null,"funder_award_id":"EFOP-3.6.3-VEKOP-16-2017-00009","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G8761883286","display_name":null,"funder_award_id":"\u00daNKP-20-4-I-SE-7","funder_id":"https://openalex.org/F4320335908","funder_display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap"},{"id":"https://openalex.org/G8797485977","display_name":null,"funder_award_id":"TKP2020","funder_id":"https://openalex.org/F4320321102","funder_display_name":"Semmelweis Egyetem"},{"id":"https://openalex.org/G8880721597","display_name":null,"funder_award_id":"16-2017-00009","funder_id":"https://openalex.org/F4320326762","funder_display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal"},{"id":"https://openalex.org/G8887787413","display_name":null,"funder_award_id":"2020-4.1.1.-TKP2020","funder_id":"https://openalex.org/F4320328991","funder_display_name":"Innov\u00e1ci\u00f3s \u00e9s Technol\u00f3giai Miniszt\u00e9rium"}],"funders":[{"id":"https://openalex.org/F4320321102","display_name":"Semmelweis Egyetem","ror":"https://ror.org/01g9ty582"},{"id":"https://openalex.org/F4320326762","display_name":"Nemzeti Kutat\u00e1si Fejleszt\u00e9si \u00e9s Innov\u00e1ci\u00f3s Hivatal","ror":null},{"id":"https://openalex.org/F4320328991","display_name":"Innov\u00e1ci\u00f3s \u00e9s Technol\u00f3giai Miniszt\u00e9rium","ror":"https://ror.org/02ey3ab96"},{"id":"https://openalex.org/F4320335908","display_name":"Nemzeti Kutat\u00e1si, Fejleszt\u00e9si \u00e9s Innovaci\u00f3s Alap","ror":null},{"id":"https://openalex.org/F4320336675","display_name":"National Research, Development and Innovation Office","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4213131528.pdf","grobid_xml":"https://content.openalex.org/works/W4213131528.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W1886978693","https://openalex.org/W1979104937","https://openalex.org/W1982267716","https://openalex.org/W2022554572","https://openalex.org/W2024103356","https://openalex.org/W2062533676","https://openalex.org/W2073137089","https://openalex.org/W2101234009","https://openalex.org/W2103017472","https://openalex.org/W2113613985","https://openalex.org/W2121690313","https://openalex.org/W2131562240","https://openalex.org/W2134197776","https://openalex.org/W2136957665","https://openalex.org/W2152705149","https://openalex.org/W2153580689","https://openalex.org/W2159675211","https://openalex.org/W2271840356","https://openalex.org/W2287383879","https://openalex.org/W2420733993","https://openalex.org/W2612872092","https://openalex.org/W2616246685","https://openalex.org/W2624968853","https://openalex.org/W2768859421","https://openalex.org/W2795508812","https://openalex.org/W2804501929","https://openalex.org/W2806622027","https://openalex.org/W2885583144","https://openalex.org/W2890911678","https://openalex.org/W2906044981","https://openalex.org/W2911932738","https://openalex.org/W2914020633","https://openalex.org/W2927886090","https://openalex.org/W2962756421","https://openalex.org/W2963073614","https://openalex.org/W2977707586","https://openalex.org/W2995590009","https://openalex.org/W3091746701","https://openalex.org/W3112600195","https://openalex.org/W3123226037","https://openalex.org/W3127140457"],"related_works":["https://openalex.org/W2377402383","https://openalex.org/W2380835401","https://openalex.org/W2381912691","https://openalex.org/W2350381577","https://openalex.org/W2353618196","https://openalex.org/W2348074676","https://openalex.org/W2385033175","https://openalex.org/W2374043190","https://openalex.org/W2363298784","https://openalex.org/W2367402697"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,68,284,323],"investigation":[2],"of":[3,44,49,57,77,118,216,252,275,286,303],"possible":[4],"interactions":[5,62],"between":[6,63],"two":[7,119],"proteins":[8,50],"in":[9,18,23,41,81,102,200,278],"intracellular":[10],"signaling":[11],"is":[12,307],"an":[13,160,308],"expensive":[14],"and":[15,125,144,190,236,259],"laborious":[16],"procedure":[17],"the":[19,32,39,42,47,55,61,66,75,98,121,126,142,181,185,192,196,201,212,221,226,229,233,237,249,273,291,304,312],"wet-lab,":[20],"therefore,":[21],"several":[22],"silico":[24],"approaches":[25],"have":[26],"been":[27],"implemented":[28],"to":[29,83,92,97,140,194],"narrow":[30],"down":[31],"candidates":[33],"for":[34,154,272,311],"future":[35],"experimental":[36],"validations.":[37],"Reformulating":[38],"problem":[40,315],"field":[43],"network":[45,73,143,167],"theory,":[46],"set":[48],"can":[51],"be":[52],"represented":[53],"as":[54,65,150,188,290],"nodes":[56],"a":[58,94,106,114,135,270,295],"network,":[59,306],"while":[60],"them":[64],"edges.":[67],"resulting":[69],"protein-protein":[70,213],"interaction":[71,214],"(PPI)":[72],"enables":[74],"use":[76],"link":[78,99,206,276],"prediction":[79,100,207,277,314],"techniques":[80],"order":[82],"discover":[84],"new":[85],"probable":[86,197],"connections.":[87],"Therefore,":[88],"here":[89],"we":[90,133],"aimed":[91],"offer":[93],"novel":[95],"approach":[96],"task":[101],"PPI":[103,279,305,313],"networks,":[104],"utilizing":[105,170,281],"generative":[107,165],"machine":[108,127,158,282],"learning":[109,128],"model.":[110,129,156],"RESULTS:":[111],"We":[112,268],"created":[113],"tool":[115,208],"that":[116,294],"consists":[117],"modules,":[120],"data":[122,131,153,186],"processing":[123,187],"framework":[124],"As":[130,157],"processing,":[132],"used":[134],"modified":[136],"breadth-first":[137],"search":[138],"algorithm":[139],"traverse":[141],"extract":[145],"induced":[146,203],"subgraphs,":[147],"which":[148],"served":[149],"image-like":[151],"input":[152],"our":[155,287],"learning,":[159],"image-to-image":[161],"translation":[162],"inspired":[163],"conditional":[164],"adversarial":[166],"(cGAN)":[168],"model":[169],"Wasserstein":[171],"distance-based":[172],"loss":[173],"improved":[174],"with":[175],"gradient":[176],"penalty":[177],"was":[178,209],"used,":[179],"taking":[180],"combined":[182],"representation":[183],"from":[184,220],"input,":[189],"training":[191],"generator":[193],"predict":[195],"unknown":[198],"edges":[199],"provided":[202],"subgraphs.":[204],"Our":[205],"evaluated":[210],"on":[211,263,299],"networks":[215,280],"five":[217],"different":[218],"species":[219],"STRING":[222],"database":[223],"by":[224],"calculating":[225],"area":[227],"under":[228],"receiver":[230],"operating":[231],"characteristic,":[232],"precision-recall":[234],"curves":[235],"normalized":[238],"discounted":[239],"cumulative":[240],"gain":[241],"(AUROC,":[242],"AUPRC,":[243],"NDCG,":[244],"respectively).":[245],"Test":[246],"runs":[247],"yielded":[248],"averaged":[250],"results":[251],"AUROC":[253],"=":[254,257,261],"0.915,":[255],"AUPRC":[256],"0.176":[258],"NDCG":[260],"0.763":[262],"all":[264],"investigated":[265],"species.":[266],"CONCLUSION:":[267],"developed":[269],"software":[271,288],"purpose":[274],"learning.":[283],"evaluation":[285],"serves":[289],"first":[292],"demonstration":[293],"cGAN":[296],"model,":[297],"conditioned":[298],"raw":[300],"topological":[301],"features":[302],"applicable":[309],"solution":[310],"without":[316],"requiring":[317],"often":[318],"unavailable":[319],"molecular":[320],"node":[321],"attributes.":[322],"corresponding":[324],"scripts":[325],"are":[326],"available":[327],"at":[328],"https://github.com/semmelweis-pharmacology/ppi_pred":[329],".":[330]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":11},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":5}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
