{"id":"https://openalex.org/W4210724491","doi":"https://doi.org/10.1186/s12859-022-04578-1","title":"MCRWR: a new method to measure the similarity of documents based on semantic network","display_name":"MCRWR: a new method to measure the similarity of documents based on semantic network","publication_year":2022,"publication_date":"2022-02-01","ids":{"openalex":"https://openalex.org/W4210724491","doi":"https://doi.org/10.1186/s12859-022-04578-1","pmid":"https://pubmed.ncbi.nlm.nih.gov/35105306"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-022-04578-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-022-04578-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-04578-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-04578-1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5033345698","display_name":"Xianwei Pan","orcid":"https://orcid.org/0000-0002-6397-8079"},"institutions":[{"id":"https://openalex.org/I91656880","display_name":"China Medical University","ror":"https://ror.org/032d4f246","country_code":"CN","type":"education","lineage":["https://openalex.org/I91656880"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xianwei Pan","raw_affiliation_strings":["School of Health Management, China Medical University, No. 77 Puhe Road, Shenyang North New Area, Shenyang, Liaoning Province, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Health Management, China Medical University, No. 77 Puhe Road, Shenyang North New Area, Shenyang, Liaoning Province, People's Republic of China","institution_ids":["https://openalex.org/I91656880"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078778324","display_name":"Peng Huang","orcid":"https://orcid.org/0000-0001-6315-0848"},"institutions":[{"id":"https://openalex.org/I91656880","display_name":"China Medical University","ror":"https://ror.org/032d4f246","country_code":"CN","type":"education","lineage":["https://openalex.org/I91656880"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Peng Huang","raw_affiliation_strings":["School of Health Management, China Medical University, No. 77 Puhe Road, Shenyang North New Area, Shenyang, Liaoning Province, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Health Management, China Medical University, No. 77 Puhe Road, Shenyang North New Area, Shenyang, Liaoning Province, People's Republic of China","institution_ids":["https://openalex.org/I91656880"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100324701","display_name":"Shan Li","orcid":"https://orcid.org/0000-0002-1776-2592"},"institutions":[{"id":"https://openalex.org/I91656880","display_name":"China Medical University","ror":"https://ror.org/032d4f246","country_code":"CN","type":"education","lineage":["https://openalex.org/I91656880"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shan Li","raw_affiliation_strings":["School of Health Management, China Medical University, No. 77 Puhe Road, Shenyang North New Area, Shenyang, Liaoning Province, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Health Management, China Medical University, No. 77 Puhe Road, Shenyang North New Area, Shenyang, Liaoning Province, People's Republic of China","institution_ids":["https://openalex.org/I91656880"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101837769","display_name":"Lei Cui","orcid":"https://orcid.org/0000-0002-2598-0637"},"institutions":[{"id":"https://openalex.org/I1099802","display_name":"Shenyang Medical College","ror":"https://ror.org/02y9xvd02","country_code":"CN","type":"education","lineage":["https://openalex.org/I1099802"]},{"id":"https://openalex.org/I91656880","display_name":"China Medical University","ror":"https://ror.org/032d4f246","country_code":"CN","type":"education","lineage":["https://openalex.org/I91656880"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Lei Cui","raw_affiliation_strings":["School of Health Management, China Medical University, No. 77 Puhe Road, Shenyang North New Area, Shenyang, Liaoning Province, People's Republic of China. lcui@cmu.edu.cn","School of Health Management, China Medical University, No. 77 Puhe Road, Shenyang North New Area, Shenyang, Liaoning Province, People's Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Health Management, China Medical University, No. 77 Puhe Road, Shenyang North New Area, Shenyang, Liaoning Province, People's Republic of China. lcui@cmu.edu.cn","institution_ids":["https://openalex.org/I91656880","https://openalex.org/I1099802"]},{"raw_affiliation_string":"School of Health Management, China Medical University, No. 77 Puhe Road, Shenyang North New Area, Shenyang, Liaoning Province, People's Republic of China","institution_ids":["https://openalex.org/I91656880"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5101837769"],"corresponding_institution_ids":["https://openalex.org/I1099802","https://openalex.org/I91656880"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.1732,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.45987033,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"23","issue":"1","first_page":"56","last_page":"56"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.7556999921798706,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.7556999921798706,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.04989999905228615,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13702","display_name":"Machine Learning in Healthcare","score":0.03359999880194664,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/semantic-similarity","display_name":"Semantic similarity","score":0.784048855304718},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.749768078327179},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7330817580223083},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5954498052597046},{"id":"https://openalex.org/keywords/random-walk","display_name":"Random walk","score":0.5440248250961304},{"id":"https://openalex.org/keywords/measure","display_name":"Measure (data warehouse)","score":0.4680190980434418},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.44056373834609985},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.41804271936416626},{"id":"https://openalex.org/keywords/semantic-network","display_name":"Semantic network","score":0.4136591851711273},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2674124836921692},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.13497596979141235},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.119487464427948},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.11648967862129211}],"concepts":[{"id":"https://openalex.org/C130318100","wikidata":"https://www.wikidata.org/wiki/Q2268914","display_name":"Semantic similarity","level":2,"score":0.784048855304718},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.749768078327179},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7330817580223083},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5954498052597046},{"id":"https://openalex.org/C121194460","wikidata":"https://www.wikidata.org/wiki/Q856741","display_name":"Random walk","level":2,"score":0.5440248250961304},{"id":"https://openalex.org/C2780009758","wikidata":"https://www.wikidata.org/wiki/Q6804172","display_name":"Measure (data warehouse)","level":2,"score":0.4680190980434418},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.44056373834609985},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.41804271936416626},{"id":"https://openalex.org/C85407183","wikidata":"https://www.wikidata.org/wiki/Q1045785","display_name":"Semantic network","level":2,"score":0.4136591851711273},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2674124836921692},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.13497596979141235},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.119487464427948},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.11648967862129211},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000075403","descriptor_name":"Semantic Web","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000075403","descriptor_name":"Semantic Web","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000075403","descriptor_name":"Semantic Web","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-022-04578-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-022-04578-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-04578-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35105306","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35105306","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:976fa2f2a479499881093eb9fd75c9a1","is_oa":true,"landing_page_url":"https://doaj.org/article/976fa2f2a479499881093eb9fd75c9a1","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 23, Iss 1, Pp 1-17 (2022)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8805236","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8805236","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-022-04578-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-022-04578-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-022-04578-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4099999964237213,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4210724491.pdf","grobid_xml":"https://content.openalex.org/works/W4210724491.grobid-xml"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W1065780816","https://openalex.org/W1952031141","https://openalex.org/W1978394996","https://openalex.org/W2002185065","https://openalex.org/W2005207065","https://openalex.org/W2025365931","https://openalex.org/W2061172803","https://openalex.org/W2100935296","https://openalex.org/W2124209874","https://openalex.org/W2128049108","https://openalex.org/W2147152072","https://openalex.org/W2153252192","https://openalex.org/W2159583324","https://openalex.org/W2164998314","https://openalex.org/W2168022112","https://openalex.org/W2191597435","https://openalex.org/W2257876130","https://openalex.org/W3021792233","https://openalex.org/W3130880317","https://openalex.org/W4252060112","https://openalex.org/W6639619044"],"related_works":["https://openalex.org/W2380654781","https://openalex.org/W2114797768","https://openalex.org/W2176214140","https://openalex.org/W2516873349","https://openalex.org/W1990601549","https://openalex.org/W4311188379","https://openalex.org/W1995453016","https://openalex.org/W2043952800","https://openalex.org/W2197479404","https://openalex.org/W1534832151"],"abstract_inverted_index":{"BACKGROUND:":[0],"Besides":[1],"Boolean":[2],"retrieval":[3],"with":[4,12,68,74,167],"medical":[5],"subject":[6],"headings":[7],"(MeSH),":[8],"PubMed":[9,49,78],"provides":[10],"users":[11],"an":[13,40],"alternative":[14],"way":[15],"called":[16],"\"Related":[17],"Articles\"":[18],"to":[19,160],"access":[20],"and":[21,35,77,94,99,105,134,190],"collect":[22],"relevant":[23],"documents":[24,195],"based":[25,51,151],"on":[26,52,152],"semantic":[27,46,140,176,184],"similarity.":[28],"To":[29],"explore":[30],"the":[31,45,53,138,182],"functionality":[32],"more":[33,36],"efficiently":[34],"accurately,":[37],"we":[38],"proposed":[39],"improved":[41,198],"algorithm":[42,169],"by":[43],"measuring":[44],"similarity":[47,60,109,141,177],"of":[48,91,103,115,119,121,131,143,147,192],"citations":[50],"MeSH-concept":[54,65,164],"network":[55,142],"model.":[56],"RESULTS:":[57],"Three":[58],"article":[59,80,139,175],"networks":[61],"are":[62,111,157],"obtained":[63],"using":[64],"random":[66,72,165],"walk":[67,73,166],"restart":[69,75,168],"(MCRWR),":[70],"MeSH":[71],"(MRWR)":[76],"related":[79],"(PMRA)":[81],"respectively.":[82,101],"The":[83,188],"area":[84],"under":[85,107],"receiver":[86],"operating":[87],"characteristic":[88],"(ROC)":[89],"curve":[90],"MCRWR,":[92],"MRWR":[93,106,132],"PMRA":[95,135],"is":[96,123,126],"0.93,":[97],"0.90,":[98],"0.67":[100],"Precisions":[102],"MCRWR":[104,122,153],"various":[108],"thresholds":[110],"higher":[112,128],"than":[113,129],"that":[114],"PMRA.":[116],"Mean":[117],"value":[118],"P5":[120],"0.742,":[124],"which":[125,179],"much":[127],"those":[130],"(0.692)":[133],"(0.223).":[136],"In":[137],"\"Genes":[144],"&":[145,149],"Function":[146],"organ":[148],"Disease\"":[150],"algorithm,":[154],"four":[155],"topics":[156],"identified":[158],"according":[159],"golden":[161],"standards.":[162],"CONCLUSION:":[163],"has":[170],"better":[171],"performance":[172],"in":[173],"constructing":[174],"network,":[178],"can":[180],"reveal":[181],"implicitly":[183],"association":[185],"between":[186],"documents.":[187],"efficiency":[189],"accuracy":[191],"retrieving":[193],"semantic-related":[194],"have":[196],"been":[197],"a":[199],"lot.":[200]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
