{"id":"https://openalex.org/W4225364091","doi":"https://doi.org/10.1186/s12859-021-04536-3","title":"vCOMBAT: a novel tool to create and visualize a computational model of bacterial antibiotic target-binding","display_name":"vCOMBAT: a novel tool to create and visualize a computational model of bacterial antibiotic target-binding","publication_year":2022,"publication_date":"2022-01-06","ids":{"openalex":"https://openalex.org/W4225364091","doi":"https://doi.org/10.1186/s12859-021-04536-3","pmid":"https://pubmed.ncbi.nlm.nih.gov/34991453"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-021-04536-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04536-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-021-04536-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-021-04536-3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5059769874","display_name":"Vi Ngoc-Nha Tran","orcid":"https://orcid.org/0000-0002-7150-6434"},"institutions":[{"id":"https://openalex.org/I78037679","display_name":"UiT The Arctic University of Norway","ror":"https://ror.org/00wge5k78","country_code":"NO","type":"education","lineage":["https://openalex.org/I78037679"]}],"countries":["NO"],"is_corresponding":true,"raw_author_name":"Vi Ngoc-Nha Tran","raw_affiliation_strings":["Department of Computer Science, Faculty of Science and Technology, UiT The Arctic University of Norway, 9037, Troms\u00f8, Norway. vi.tran@uit.no","Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, 9037, Troms\u00f8, Norway. vi.tran@uit.no","Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, 9037, Troms\u00f8, Norway"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Faculty of Science and Technology, UiT The Arctic University of Norway, 9037, Troms\u00f8, Norway. vi.tran@uit.no","institution_ids":[]},{"raw_affiliation_string":"Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, 9037, Troms\u00f8, Norway. vi.tran@uit.no","institution_ids":[]},{"raw_affiliation_string":"Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, 9037, Troms\u00f8, Norway","institution_ids":["https://openalex.org/I78037679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035152982","display_name":"Alireza Shams","orcid":"https://orcid.org/0000-0001-9895-4424"},"institutions":[{"id":"https://openalex.org/I45683168","display_name":"Polytechnique Montr\u00e9al","ror":"https://ror.org/05f8d4e86","country_code":"CA","type":"education","lineage":["https://openalex.org/I45683168"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Alireza Shams","raw_affiliation_strings":["Polytechnique Montr\u00e9al, Montreal, QC, H3T 1J4, Canada"],"affiliations":[{"raw_affiliation_string":"Polytechnique Montr\u00e9al, Montreal, QC, H3T 1J4, Canada","institution_ids":["https://openalex.org/I45683168"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015267877","display_name":"Sinan Ascioglu","orcid":null},"institutions":[{"id":"https://openalex.org/I57206974","display_name":"New York University","ror":"https://ror.org/0190ak572","country_code":"US","type":"education","lineage":["https://openalex.org/I57206974"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sinan Ascioglu","raw_affiliation_strings":["Integrated Digital Media Department, New York University, New York, USA"],"affiliations":[{"raw_affiliation_string":"Integrated Digital Media Department, New York University, New York, USA","institution_ids":["https://openalex.org/I57206974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086156750","display_name":"Antal Martinecz","orcid":"https://orcid.org/0000-0001-6539-6358"},"institutions":[{"id":"https://openalex.org/I78037679","display_name":"UiT The Arctic University of Norway","ror":"https://ror.org/00wge5k78","country_code":"NO","type":"education","lineage":["https://openalex.org/I78037679"]},{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]}],"countries":["NO","US"],"is_corresponding":false,"raw_author_name":"Antal Martinecz","raw_affiliation_strings":["Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, 9037, Troms\u00f8, Norway","Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA, 16802, USA"],"affiliations":[{"raw_affiliation_string":"Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, 9037, Troms\u00f8, Norway","institution_ids":["https://openalex.org/I78037679"]},{"raw_affiliation_string":"Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA, 16802, USA","institution_ids":["https://openalex.org/I130769515"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085974269","display_name":"Jingyi Liang","orcid":"https://orcid.org/0009-0002-4347-1809"},"institutions":[{"id":"https://openalex.org/I78037679","display_name":"UiT The Arctic University of Norway","ror":"https://ror.org/00wge5k78","country_code":"NO","type":"education","lineage":["https://openalex.org/I78037679"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Jingyi Liang","raw_affiliation_strings":["Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, 9037, Troms\u00f8, Norway"],"affiliations":[{"raw_affiliation_string":"Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, 9037, Troms\u00f8, Norway","institution_ids":["https://openalex.org/I78037679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063090589","display_name":"Fabrizio Clarelli","orcid":"https://orcid.org/0000-0002-3738-3469"},"institutions":[{"id":"https://openalex.org/I78037679","display_name":"UiT The Arctic University of Norway","ror":"https://ror.org/00wge5k78","country_code":"NO","type":"education","lineage":["https://openalex.org/I78037679"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Fabrizio Clarelli","raw_affiliation_strings":["Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, 9037, Troms\u00f8, Norway"],"affiliations":[{"raw_affiliation_string":"Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, 9037, Troms\u00f8, Norway","institution_ids":["https://openalex.org/I78037679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062645497","display_name":"Rafal Mostowy","orcid":"https://orcid.org/0000-0002-4557-3748"},"institutions":[{"id":"https://openalex.org/I47508984","display_name":"Imperial College London","ror":"https://ror.org/041kmwe10","country_code":"GB","type":"education","lineage":["https://openalex.org/I47508984"]},{"id":"https://openalex.org/I4210120729","display_name":"St Mary's Hospital","ror":"https://ror.org/02jv2qv86","country_code":"GB","type":"healthcare","lineage":["https://openalex.org/I4210120729","https://openalex.org/I4210127145"]},{"id":"https://openalex.org/I126596746","display_name":"Jagiellonian University","ror":"https://ror.org/03bqmcz70","country_code":"PL","type":"education","lineage":["https://openalex.org/I126596746"]}],"countries":["GB","PL"],"is_corresponding":false,"raw_author_name":"Rafal Mostowy","raw_affiliation_strings":["Department of Infectious Disease Epidemiology, Imperial College London, St Mary's Campus, London, UK","Malopolska Centre of Biotechnology, Jagiellonian University, Krak\u00f3w, Poland"],"affiliations":[{"raw_affiliation_string":"Department of Infectious Disease Epidemiology, Imperial College London, St Mary's Campus, London, UK","institution_ids":["https://openalex.org/I4210120729","https://openalex.org/I47508984"]},{"raw_affiliation_string":"Malopolska Centre of Biotechnology, Jagiellonian University, Krak\u00f3w, Poland","institution_ids":["https://openalex.org/I126596746"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065524676","display_name":"Ted Cohen","orcid":"https://orcid.org/0000-0002-8091-7198"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ted Cohen","raw_affiliation_strings":["Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, USA"],"affiliations":[{"raw_affiliation_string":"Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091699409","display_name":"Pia Abel zur Wiesch","orcid":"https://orcid.org/0000-0001-9420-9005"},"institutions":[{"id":"https://openalex.org/I130769515","display_name":"Pennsylvania State University","ror":"https://ror.org/04p491231","country_code":"US","type":"education","lineage":["https://openalex.org/I130769515"]},{"id":"https://openalex.org/I1333353642","display_name":"Norwegian Institute of Public Health","ror":"https://ror.org/046nvst19","country_code":"NO","type":"funder","lineage":["https://openalex.org/I1333353642","https://openalex.org/I4210149801","https://openalex.org/I4210163359"]},{"id":"https://openalex.org/I78037679","display_name":"UiT The Arctic University of Norway","ror":"https://ror.org/00wge5k78","country_code":"NO","type":"education","lineage":["https://openalex.org/I78037679"]}],"countries":["NO","US"],"is_corresponding":false,"raw_author_name":"Pia Abel zur Wiesch","raw_affiliation_strings":["Centre for Molecular Medicine Norway, Nordic EMBL Partnership, Blindern, 0318, Oslo, Norway","Department of Biology, The Pennsylvania State University, University Park, PA, 16802, USA","Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, 9037, Troms\u00f8, Norway","Division of Infection Control, Norwegian Institute of Public Health, Oslo, Norway","Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA, 16802, USA"],"affiliations":[{"raw_affiliation_string":"Centre for Molecular Medicine Norway, Nordic EMBL Partnership, Blindern, 0318, Oslo, Norway","institution_ids":[]},{"raw_affiliation_string":"Department of Biology, The Pennsylvania State University, University Park, PA, 16802, USA","institution_ids":["https://openalex.org/I130769515"]},{"raw_affiliation_string":"Department of Pharmacy, Faculty of Health Sciences, UiT The Arctic University of Norway, 9037, Troms\u00f8, Norway","institution_ids":["https://openalex.org/I78037679"]},{"raw_affiliation_string":"Division of Infection Control, Norwegian Institute of Public Health, Oslo, Norway","institution_ids":["https://openalex.org/I1333353642"]},{"raw_affiliation_string":"Huck Institutes of the Life Sciences, The Pennsylvania State University, University Park, PA, 16802, USA","institution_ids":["https://openalex.org/I130769515"]}]}],"institutions":[],"countries_distinct_count":5,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5059769874"],"corresponding_institution_ids":["https://openalex.org/I78037679"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.1453,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.34911849,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":96},"biblio":{"volume":"23","issue":"1","first_page":"22","last_page":"22"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10147","display_name":"Antibiotic Resistance in Bacteria","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1313","display_name":"Molecular Medicine"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10147","display_name":"Antibiotic Resistance in Bacteria","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1313","display_name":"Molecular Medicine"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11036","display_name":"Antibiotics Pharmacokinetics and Efficacy","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11845","display_name":"Cancer therapeutics and mechanisms","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/antibiotics","display_name":"Antibiotics","score":0.6079293489456177},{"id":"https://openalex.org/keywords/dosing","display_name":"Dosing","score":0.5484290719032288},{"id":"https://openalex.org/keywords/antibiotic-resistance","display_name":"Antibiotic resistance","score":0.5090412497520447},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5065454244613647},{"id":"https://openalex.org/keywords/rifampicin","display_name":"Rifampicin","score":0.4967368245124817},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.45170724391937256},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.43259117007255554},{"id":"https://openalex.org/keywords/biochemical-engineering","display_name":"Biochemical engineering","score":0.425531804561615},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.30957257747650146},{"id":"https://openalex.org/keywords/microbiology","display_name":"Microbiology","score":0.18169257044792175},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.17338263988494873},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.09539774060249329}],"concepts":[{"id":"https://openalex.org/C501593827","wikidata":"https://www.wikidata.org/wiki/Q12187","display_name":"Antibiotics","level":2,"score":0.6079293489456177},{"id":"https://openalex.org/C2777288759","wikidata":"https://www.wikidata.org/wiki/Q4164182","display_name":"Dosing","level":2,"score":0.5484290719032288},{"id":"https://openalex.org/C94665300","wikidata":"https://www.wikidata.org/wiki/Q63391344","display_name":"Antibiotic resistance","level":3,"score":0.5090412497520447},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5065454244613647},{"id":"https://openalex.org/C2778607973","wikidata":"https://www.wikidata.org/wiki/Q422652","display_name":"Rifampicin","level":3,"score":0.4967368245124817},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.45170724391937256},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.43259117007255554},{"id":"https://openalex.org/C183696295","wikidata":"https://www.wikidata.org/wiki/Q2487696","display_name":"Biochemical engineering","level":1,"score":0.425531804561615},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.30957257747650146},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.18169257044792175},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.17338263988494873},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.09539774060249329},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D000900","descriptor_name":"Anti-Bacterial Agents","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":true},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D024881","descriptor_name":"Drug Resistance, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D024881","descriptor_name":"Drug Resistance, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D024881","descriptor_name":"Drug Resistance, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":8,"locations":[{"id":"doi:10.1186/s12859-021-04536-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04536-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-021-04536-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34991453","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34991453","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:ruj.uj.edu.pl:item/306869","is_oa":true,"landing_page_url":"https://ruj.uj.edu.pl/xmlui/handle/item/306869","pdf_url":null,"source":{"id":"https://openalex.org/S4306400316","display_name":"Homo Politicus (Academy of Humanities and Economics in Lodz)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"artyku\u0142 w czasopi\u015bmie"},{"id":"pmh:oai:doaj.org/article:3dd0590bae834732ad088cd1ab86823b","is_oa":true,"landing_page_url":"https://doaj.org/article/3dd0590bae834732ad088cd1ab86823b","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 23, Iss 1, Pp 1-15 (2022)","raw_type":"article"},{"id":"pmh:oai:munin.uit.no:10037/25062","is_oa":true,"landing_page_url":"https://hdl.handle.net/10037/25062","pdf_url":null,"source":{"id":"https://openalex.org/S4306401716","display_name":"Duo Research Archive (University of Oslo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I184942183","host_organization_name":"University of Oslo","host_organization_lineage":["https://openalex.org/I184942183"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:publications.polymtl.ca:50536","is_oa":false,"landing_page_url":"https://publications.polymtl.ca/50536/","pdf_url":null,"source":{"id":"https://openalex.org/S4306401013","display_name":"PolyPublie (\u00c9cole Polytechnique de Montr\u00e9al)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I45683168","host_organization_name":"Polytechnique Montr\u00e9al","host_organization_lineage":["https://openalex.org/I45683168"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"PeerReviewed"},{"id":"pmh:oai:pubmedcentral.nih.gov:8734216","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8734216","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:www.duo.uio.no:10852/93952","is_oa":true,"landing_page_url":"http://urn.nb.no/URN:NBN:no-96494","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"1471-2105","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1186/s12859-021-04536-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04536-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-021-04536-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.7699999809265137,"id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G2456029313","display_name":null,"funder_award_id":"OPP1111658","funder_id":"https://openalex.org/F4320306137","funder_display_name":"Bill and Melinda Gates Foundation"},{"id":"https://openalex.org/G8181900433","display_name":null,"funder_award_id":"262686","funder_id":"https://openalex.org/F4320323299","funder_display_name":"Norges Forskningsr\u00e5d"}],"funders":[{"id":"https://openalex.org/F4320306137","display_name":"Bill and Melinda Gates Foundation","ror":"https://ror.org/0456r8d26"},{"id":"https://openalex.org/F4320307844","display_name":"European Molecular Biology Organization","ror":"https://ror.org/04wfr2810"},{"id":"https://openalex.org/F4320309820","display_name":"Universitetet i Troms\u00f8","ror":"https://ror.org/00wge5k78"},{"id":"https://openalex.org/F4320323299","display_name":"Norges Forskningsr\u00e5d","ror":"https://ror.org/00epmv149"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4225364091.pdf","grobid_xml":"https://content.openalex.org/works/W4225364091.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W1720252267","https://openalex.org/W1738949971","https://openalex.org/W2008094946","https://openalex.org/W2059905849","https://openalex.org/W2063424702","https://openalex.org/W2092030365","https://openalex.org/W2096445105","https://openalex.org/W2105822964","https://openalex.org/W2129441585","https://openalex.org/W2135714157","https://openalex.org/W2137741478","https://openalex.org/W2143942591","https://openalex.org/W2158624607","https://openalex.org/W2160204123","https://openalex.org/W2182861476","https://openalex.org/W2295885925","https://openalex.org/W2543303947","https://openalex.org/W2569834008","https://openalex.org/W2582743722","https://openalex.org/W2602189642","https://openalex.org/W2923097149","https://openalex.org/W2933620934","https://openalex.org/W2953815954","https://openalex.org/W2956038859","https://openalex.org/W2958443347","https://openalex.org/W2991436132","https://openalex.org/W3049770176"],"related_works":["https://openalex.org/W2955020749","https://openalex.org/W2029063045","https://openalex.org/W2507683919","https://openalex.org/W2076505260","https://openalex.org/W4226193097","https://openalex.org/W4320037900","https://openalex.org/W4297123388","https://openalex.org/W3032187068","https://openalex.org/W4221083638","https://openalex.org/W3152803520"],"abstract_inverted_index":null,"counts_by_year":[{"year":2022,"cited_by_count":2}],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}