{"id":"https://openalex.org/W3216980854","doi":"https://doi.org/10.1186/s12859-021-04484-y","title":"A multitask transfer learning framework for the prediction of virus-human protein\u2013protein interactions","display_name":"A multitask transfer learning framework for the prediction of virus-human protein\u2013protein interactions","publication_year":2021,"publication_date":"2021-11-27","ids":{"openalex":"https://openalex.org/W3216980854","doi":"https://doi.org/10.1186/s12859-021-04484-y","mag":"3216980854","pmid":"https://pubmed.ncbi.nlm.nih.gov/34837942"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-021-04484-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04484-y","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-021-04484-y","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["arxiv","crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-021-04484-y","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5019546782","display_name":"Thi Ngan Dong","orcid":"https://orcid.org/0000-0002-3240-9068"},"institutions":[{"id":"https://openalex.org/I114112103","display_name":"Leibniz University Hannover","ror":"https://ror.org/0304hq317","country_code":"DE","type":"education","lineage":["https://openalex.org/I114112103"]},{"id":"https://openalex.org/I4210136150","display_name":"L3S Research Center","ror":"https://ror.org/039t4wk02","country_code":"DE","type":"facility","lineage":["https://openalex.org/I114112103","https://openalex.org/I4210136150","https://openalex.org/I94509681"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Thi Ngan Dong","raw_affiliation_strings":["L3S Research Center, Leibniz University Hannover, Hannover, Germany. dong@l3s.de","L3S Research Center, Leibniz University Hannover, Hannover, Germany"],"raw_orcid":"https://orcid.org/0000-0002-3240-9068","affiliations":[{"raw_affiliation_string":"L3S Research Center, Leibniz University Hannover, Hannover, Germany. dong@l3s.de","institution_ids":["https://openalex.org/I4210136150"]},{"raw_affiliation_string":"L3S Research Center, Leibniz University Hannover, Hannover, Germany","institution_ids":["https://openalex.org/I4210136150","https://openalex.org/I114112103"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060528819","display_name":"Graham Brogden","orcid":"https://orcid.org/0000-0002-2306-7932"},"institutions":[{"id":"https://openalex.org/I189991","display_name":"University of Veterinary Medicine Hannover, Foundation","ror":"https://ror.org/015qjqf64","country_code":"DE","type":"education","lineage":["https://openalex.org/I189991"]},{"id":"https://openalex.org/I4210151865","display_name":"Center for Experimental and Clinical Infection Research","ror":"https://ror.org/04bya8j72","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210151865"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Graham Brogden","raw_affiliation_strings":["Institute for Biochemistry, University of Veterinary Medicine, Hannover, Germany","Institute of Experimental Virology, TWINCORE, Center for Experimental and Clinical Infection Research Hannover, Hannover, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Biochemistry, University of Veterinary Medicine, Hannover, Germany","institution_ids":["https://openalex.org/I189991"]},{"raw_affiliation_string":"Institute of Experimental Virology, TWINCORE, Center for Experimental and Clinical Infection Research Hannover, Hannover, Germany","institution_ids":["https://openalex.org/I4210151865"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011303680","display_name":"Gisa Gerold","orcid":"https://orcid.org/0000-0002-1326-5038"},"institutions":[{"id":"https://openalex.org/I189991","display_name":"University of Veterinary Medicine Hannover, Foundation","ror":"https://ror.org/015qjqf64","country_code":"DE","type":"education","lineage":["https://openalex.org/I189991"]},{"id":"https://openalex.org/I4210151865","display_name":"Center for Experimental and Clinical Infection Research","ror":"https://ror.org/04bya8j72","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210151865"]},{"id":"https://openalex.org/I90267481","display_name":"Ume\u00e5 University","ror":"https://ror.org/05kb8h459","country_code":"SE","type":"education","lineage":["https://openalex.org/I90267481"]}],"countries":["DE","SE"],"is_corresponding":false,"raw_author_name":"Gisa Gerold","raw_affiliation_strings":["Department of Clinical Microbiology, Ume\u00e5 University, Ume\u00e5, Sweden","Institute for Biochemistry, University of Veterinary Medicine, Hannover, Germany","Institute of Experimental Virology, TWINCORE, Center for Experimental and Clinical Infection Research Hannover, Hannover, Germany","Wallenberg Centre for Molecular Medicine (WCMM), Ume\u00e5 University, Ume\u00e5, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Clinical Microbiology, Ume\u00e5 University, Ume\u00e5, Sweden","institution_ids":["https://openalex.org/I90267481"]},{"raw_affiliation_string":"Institute for Biochemistry, University of Veterinary Medicine, Hannover, Germany","institution_ids":["https://openalex.org/I189991"]},{"raw_affiliation_string":"Institute of Experimental Virology, TWINCORE, Center for Experimental and Clinical Infection Research Hannover, Hannover, Germany","institution_ids":["https://openalex.org/I4210151865"]},{"raw_affiliation_string":"Wallenberg Centre for Molecular Medicine (WCMM), Ume\u00e5 University, Ume\u00e5, Sweden","institution_ids":["https://openalex.org/I90267481"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027689420","display_name":"Megha Khosla","orcid":"https://orcid.org/0000-0002-0319-3181"},"institutions":[{"id":"https://openalex.org/I114112103","display_name":"Leibniz University Hannover","ror":"https://ror.org/0304hq317","country_code":"DE","type":"education","lineage":["https://openalex.org/I114112103"]},{"id":"https://openalex.org/I4210136150","display_name":"L3S Research Center","ror":"https://ror.org/039t4wk02","country_code":"DE","type":"facility","lineage":["https://openalex.org/I114112103","https://openalex.org/I4210136150","https://openalex.org/I94509681"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Megha Khosla","raw_affiliation_strings":["L3S Research Center, Leibniz University Hannover, Hannover, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"L3S Research Center, Leibniz University Hannover, Hannover, Germany","institution_ids":["https://openalex.org/I4210136150","https://openalex.org/I114112103"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5019546782"],"corresponding_institution_ids":["https://openalex.org/I114112103","https://openalex.org/I4210136150"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.9012,"has_fulltext":true,"cited_by_count":33,"citation_normalized_percentile":{"value":0.86735484,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"22","issue":"1","first_page":"572","last_page":"572"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.4733999967575073,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.4733999967575073,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.15399999916553497,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.10440000146627426,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/transfer-of-learning","display_name":"Transfer of learning","score":0.6761623024940491},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5948919057846069},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5191973447799683},{"id":"https://openalex.org/keywords/protein\u2013protein-interaction","display_name":"Protein\u2013protein interaction","score":0.4743339419364929},{"id":"https://openalex.org/keywords/multi-task-learning","display_name":"Multi-task learning","score":0.4180125594139099},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.37236523628234863},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.32429540157318115},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2770550549030304},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.19073066115379333},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.14051559567451477},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.10586825013160706}],"concepts":[{"id":"https://openalex.org/C150899416","wikidata":"https://www.wikidata.org/wiki/Q1820378","display_name":"Transfer of learning","level":2,"score":0.6761623024940491},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5948919057846069},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5191973447799683},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.4743339419364929},{"id":"https://openalex.org/C28006648","wikidata":"https://www.wikidata.org/wiki/Q6934509","display_name":"Multi-task learning","level":3,"score":0.4180125594139099},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.37236523628234863},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.32429540157318115},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2770550549030304},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.19073066115379333},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.14051559567451477},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.10586825013160706},{"id":"https://openalex.org/C201995342","wikidata":"https://www.wikidata.org/wiki/Q682496","display_name":"Systems engineering","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000069550","descriptor_name":"Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086382","descriptor_name":"COVID-19","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000086402","descriptor_name":"SARS-CoV-2","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/s12859-021-04484-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04484-y","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-021-04484-y","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34837942","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34837942","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:arXiv.org:2111.13346","is_oa":true,"landing_page_url":"http://arxiv.org/abs/2111.13346","pdf_url":"https://arxiv.org/pdf/2111.13346","source":{"id":"https://openalex.org/S4306400194","display_name":"arXiv (Cornell University)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I205783295","host_organization_name":"Cornell University","host_organization_lineage":["https://openalex.org/I205783295"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"text"},{"id":"pmh:oai:DiVA.org:umu-190111","is_oa":true,"landing_page_url":"http://urn.kb.se/resolve?urn=urn:nbn:se:umu:diva-190111","pdf_url":null,"source":{"id":"https://openalex.org/S4306400360","display_name":"DiVA at Ume\u00e5 University (Ume\u00e5 University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I90267481","host_organization_name":"Ume\u00e5 University","host_organization_lineage":["https://openalex.org/I90267481"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:7f0946352b384d449aa7911036baabb1","is_oa":true,"landing_page_url":"https://doaj.org/article/7f0946352b384d449aa7911036baabb1","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 22, Iss 1, Pp 1-24 (2021)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8626732","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8626732","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-021-04484-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04484-y","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-021-04484-y","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.7900000214576721,"display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G1891073028","display_name":null,"funder_award_id":"project 76251-99","funder_id":"https://openalex.org/F4320313139","funder_display_name":"Nieders\u00e4chsische Ministerium f\u00fcr Wissenschaft und Kultur"},{"id":"https://openalex.org/G1897616071","display_name":null,"funder_award_id":"MWK, project 76251-99","funder_id":"https://openalex.org/F4320313139","funder_display_name":"Nieders\u00e4chsische Ministerium f\u00fcr Wissenschaft und Kultur"}],"funders":[{"id":"https://openalex.org/F4320313139","display_name":"Nieders\u00e4chsische Ministerium f\u00fcr Wissenschaft und Kultur","ror":"https://ror.org/0116z8r77"},{"id":"https://openalex.org/F4320313434","display_name":"Institute for Catastrophic Loss Reduction","ror":null},{"id":"https://openalex.org/F4320322379","display_name":"Gottfried Wilhelm Leibniz Universit\u00e4t Hannover","ror":"https://ror.org/0304hq317"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3216980854.pdf","grobid_xml":"https://content.openalex.org/works/W3216980854.grobid-xml"},"referenced_works_count":94,"referenced_works":["https://openalex.org/W177551302","https://openalex.org/W1641971541","https://openalex.org/W1966238900","https://openalex.org/W1975216811","https://openalex.org/W1977111282","https://openalex.org/W1985255881","https://openalex.org/W1990593099","https://openalex.org/W2009543464","https://openalex.org/W2013090907","https://openalex.org/W2027518730","https://openalex.org/W2028273907","https://openalex.org/W2033050656","https://openalex.org/W2041449172","https://openalex.org/W2043816461","https://openalex.org/W2044703561","https://openalex.org/W2044715036","https://openalex.org/W2054564977","https://openalex.org/W2062989416","https://openalex.org/W2079277579","https://openalex.org/W2084327978","https://openalex.org/W2096173332","https://openalex.org/W2103017472","https://openalex.org/W2110852671","https://openalex.org/W2112865076","https://openalex.org/W2116988471","https://openalex.org/W2125810455","https://openalex.org/W2133177319","https://openalex.org/W2142678031","https://openalex.org/W2150452800","https://openalex.org/W2165253681","https://openalex.org/W2171667802","https://openalex.org/W2272509401","https://openalex.org/W2298307953","https://openalex.org/W2321523976","https://openalex.org/W2344319046","https://openalex.org/W2465613542","https://openalex.org/W2473551313","https://openalex.org/W2564980658","https://openalex.org/W2567661995","https://openalex.org/W2577360189","https://openalex.org/W2583561812","https://openalex.org/W2618265628","https://openalex.org/W2729066788","https://openalex.org/W2735435042","https://openalex.org/W2739999456","https://openalex.org/W2755111416","https://openalex.org/W2768528779","https://openalex.org/W2801727863","https://openalex.org/W2885821429","https://openalex.org/W2896544226","https://openalex.org/W2947281209","https://openalex.org/W2948220209","https://openalex.org/W2966916628","https://openalex.org/W2970491619","https://openalex.org/W2970971581","https://openalex.org/W2978425865","https://openalex.org/W2980789587","https://openalex.org/W2990632561","https://openalex.org/W2997181117","https://openalex.org/W2998220730","https://openalex.org/W3004238495","https://openalex.org/W3009912996","https://openalex.org/W3009916829","https://openalex.org/W3012088820","https://openalex.org/W3013185667","https://openalex.org/W3021880084","https://openalex.org/W3022435472","https://openalex.org/W3037496568","https://openalex.org/W3038261609","https://openalex.org/W3041834745","https://openalex.org/W3043379468","https://openalex.org/W3080378920","https://openalex.org/W3081689004","https://openalex.org/W3083234946","https://openalex.org/W3092571898","https://openalex.org/W3098119651","https://openalex.org/W3102648521","https://openalex.org/W3111039151","https://openalex.org/W3112600195","https://openalex.org/W3116855495","https://openalex.org/W3127273378","https://openalex.org/W3134084134","https://openalex.org/W3135243815","https://openalex.org/W3140214645","https://openalex.org/W3153337867","https://openalex.org/W3155958125","https://openalex.org/W3160502707","https://openalex.org/W3169609444","https://openalex.org/W3172207918","https://openalex.org/W3177828909","https://openalex.org/W3192937766","https://openalex.org/W3199764852","https://openalex.org/W3216980854","https://openalex.org/W4296816479"],"related_works":["https://openalex.org/W2821676139","https://openalex.org/W3043695725","https://openalex.org/W4382138864","https://openalex.org/W4387770285","https://openalex.org/W3022215768","https://openalex.org/W3135975972","https://openalex.org/W3016888008","https://openalex.org/W2099982459","https://openalex.org/W4385864216","https://openalex.org/W4387183713"],"abstract_inverted_index":{"BACKGROUND:":[0],"Viral":[1],"infections":[2],"are":[3],"causing":[4],"significant":[5],"morbidity":[6],"and":[7,18,33,41,57,70,95,162,187,208,220],"mortality":[8],"worldwide.":[9],"Understanding":[10],"the":[11,27,47,87,96,100,105,147,171,188,192],"interaction":[12,97,174,211],"patterns":[13,98],"between":[14,53],"a":[15,22,54,80,125,131,160],"particular":[16],"virus":[17,56,194],"human":[19,58,101,151],"proteins":[20],"plays":[21],"crucial":[23],"role":[24],"in":[25,39],"unveiling":[26],"underlying":[28],"mechanism":[29],"of":[30,43,49,74,89,107,112,134,149],"viral":[31],"infection":[32],"pathogenesis.":[34],"This":[35,154],"could":[36],"further":[37],"help":[38],"prevention":[40],"treatment":[42],"virus-related":[44],"diseases.":[45],"However,":[46],"task":[48,156],"predicting":[50],"protein-protein":[51,152,173,210],"interactions":[52,69],"new":[55],"cells":[59],"is":[60],"extremely":[61],"challenging":[62],"due":[63],"to":[64,103,145,165,169],"scarce":[65],"data":[66],"on":[67,183],"virus-human":[68,172,207],"fast":[71],"mutation":[72],"rates":[73],"most":[75],"viruses.":[76],"RESULTS:":[77],"We":[78,214],"developed":[79],"multitask":[81],"transfer":[82],"learning":[83],"approach":[84,129,179],"that":[85,199],"exploits":[86],"information":[88],"around":[90],"24":[91],"million":[92],"protein":[93,115,121,135],"sequences":[94],"from":[99,130],"interactome":[102],"counter":[104],"problem":[106],"small":[108],"training":[109],"datasets.":[110],"Instead":[111],"using":[113],"hand-crafted":[114],"features,":[116],"we":[117,138],"utilize":[118],"statistically":[119],"rich":[120],"representations":[122],"learned":[123],"by":[124],"deep":[126],"language":[127],"modeling":[128],"massive":[132],"source":[133],"sequences.":[136],"Additionally,":[137],"employ":[139],"an":[140],"additional":[141,155],"objective":[142,157],"which":[143],"aims":[144],"maximize":[146],"probability":[148],"observing":[150],"interactions.":[153],"acts":[158],"as":[159],"regularizer":[161],"also":[163],"allows":[164],"incorporate":[166],"domain":[167],"knowledge":[168],"inform":[170],"prediction":[175,212],"model.":[176],"CONCLUSIONS:":[177],"Our":[178],"achieved":[180],"competitive":[181],"results":[182,197],"13":[184],"benchmark":[185],"datasets":[186],"case":[189],"study":[190],"for":[191,205,218],"SARS-COV-2":[193],"receptor.":[195],"Experimental":[196],"show":[198],"our":[200,216],"proposed":[201],"model":[202],"works":[203],"effectively":[204],"both":[206],"bacteria-human":[209],"tasks.":[213],"share":[215],"code":[217],"reproducibility":[219],"future":[221],"research":[222],"at":[223],"https://git.l3s.uni-hannover.de/dong/multitask-transfer":[224],".":[225]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":1}],"updated_date":"2026-07-03T08:13:44.112507","created_date":"2021-12-06T00:00:00"}
