{"id":"https://openalex.org/W3202413159","doi":"https://doi.org/10.1186/s12859-021-04297-z","title":"Using BioPAX-Parser (BiP) to enrich lists of genes or proteins with pathway data","display_name":"Using BioPAX-Parser (BiP) to enrich lists of genes or proteins with pathway data","publication_year":2021,"publication_date":"2021-09-30","ids":{"openalex":"https://openalex.org/W3202413159","doi":"https://doi.org/10.1186/s12859-021-04297-z","mag":"3202413159","pmid":"https://pubmed.ncbi.nlm.nih.gov/34592927"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-021-04297-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04297-z","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04297-z","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04297-z","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078020905","display_name":"Giuseppe Agapito","orcid":"https://orcid.org/0000-0003-2868-7732"},"institutions":[{"id":"https://openalex.org/I36443711","display_name":"Magna Graecia University","ror":"https://ror.org/0530bdk91","country_code":"IT","type":"education","lineage":["https://openalex.org/I36443711"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Giuseppe Agapito","raw_affiliation_strings":["Data Analytics Research Center, University \"Magna Graecia\", Catanzaro, Italy. agapito@unicz.it","Department of Legal, Economic and Social Sciences, University \"Magna Graecia\", Catanzaro, Italy. agapito@unicz.it","Department of Legal, Economic and Social Sciences, University \u201cMagna Graecia\u201d, Catanzaro, Italy"],"affiliations":[{"raw_affiliation_string":"Data Analytics Research Center, University \"Magna Graecia\", Catanzaro, Italy. agapito@unicz.it","institution_ids":[]},{"raw_affiliation_string":"Department of Legal, Economic and Social Sciences, University \"Magna Graecia\", Catanzaro, Italy. agapito@unicz.it","institution_ids":[]},{"raw_affiliation_string":"Department of Legal, Economic and Social Sciences, University \u201cMagna Graecia\u201d, Catanzaro, Italy","institution_ids":["https://openalex.org/I36443711"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5004845138","display_name":"Mario Cannataro","orcid":"https://orcid.org/0000-0003-1502-2387"},"institutions":[{"id":"https://openalex.org/I36443711","display_name":"Magna Graecia University","ror":"https://ror.org/0530bdk91","country_code":"IT","type":"education","lineage":["https://openalex.org/I36443711"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Mario Cannataro","raw_affiliation_strings":["Data Analytics Research Center, University \"Magna Graecia\", Catanzaro, Italy. cannataro@unicz.it","Department of Medical and Surgical Sciences, University \"Magna Graecia\", Catanzaro, Italy. cannataro@unicz.it","Department of Medical and Surgical Sciences, University \u201cMagna Graecia\u201d, Catanzaro, Italy"],"affiliations":[{"raw_affiliation_string":"Data Analytics Research Center, University \"Magna Graecia\", Catanzaro, Italy. cannataro@unicz.it","institution_ids":[]},{"raw_affiliation_string":"Department of Medical and Surgical Sciences, University \"Magna Graecia\", Catanzaro, Italy. cannataro@unicz.it","institution_ids":[]},{"raw_affiliation_string":"Department of Medical and Surgical Sciences, University \u201cMagna Graecia\u201d, Catanzaro, Italy","institution_ids":["https://openalex.org/I36443711"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5004845138","https://openalex.org/A5078020905"],"corresponding_institution_ids":["https://openalex.org/I36443711"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.6492,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.6733507,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"22","issue":"S13","first_page":"376","last_page":"376"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9811999797821045,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9721999764442444,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6022706031799316},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5013337135314941},{"id":"https://openalex.org/keywords/parsing","display_name":"Parsing","score":0.4886229634284973},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.46384197473526},{"id":"https://openalex.org/keywords/pathway-analysis","display_name":"Pathway analysis","score":0.4591374695301056},{"id":"https://openalex.org/keywords/biological-pathway","display_name":"Biological pathway","score":0.45395439863204956},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.44630616903305054},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4462851881980896},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.43889862298965454},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.29757219552993774},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.27288544178009033},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.13426628708839417},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.10525047779083252}],"concepts":[{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6022706031799316},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5013337135314941},{"id":"https://openalex.org/C186644900","wikidata":"https://www.wikidata.org/wiki/Q194152","display_name":"Parsing","level":2,"score":0.4886229634284973},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.46384197473526},{"id":"https://openalex.org/C2779230013","wikidata":"https://www.wikidata.org/wiki/Q25303877","display_name":"Pathway analysis","level":4,"score":0.4591374695301056},{"id":"https://openalex.org/C9927688","wikidata":"https://www.wikidata.org/wiki/Q4915012","display_name":"Biological pathway","level":4,"score":0.45395439863204956},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.44630616903305054},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4462851881980896},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.43889862298965454},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.29757219552993774},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.27288544178009033},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.13426628708839417},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.10525047779083252},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-021-04297-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04297-z","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04297-z","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34592927","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34592927","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:01f002fa2b8c473ea5535133d5307197","is_oa":true,"landing_page_url":"https://doaj.org/article/01f002fa2b8c473ea5535133d5307197","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 22, Iss S13, Pp 1-35 (2021)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:7376556","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC8482563","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:8482563","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8482563","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-021-04297-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04297-z","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04297-z","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3202413159.pdf","grobid_xml":"https://content.openalex.org/works/W3202413159.grobid-xml"},"referenced_works_count":140,"referenced_works":["https://openalex.org/W1514408827","https://openalex.org/W1515008413","https://openalex.org/W1815643724","https://openalex.org/W1894751757","https://openalex.org/W1966872601","https://openalex.org/W1969709265","https://openalex.org/W1970614140","https://openalex.org/W1974115398","https://openalex.org/W1979594866","https://openalex.org/W1979992629","https://openalex.org/W1985871447","https://openalex.org/W1987449657","https://openalex.org/W1994548165","https://openalex.org/W1997936030","https://openalex.org/W2006219744","https://openalex.org/W2006381004","https://openalex.org/W2010502047","https://openalex.org/W2012319099","https://openalex.org/W2030283142","https://openalex.org/W2031994938","https://openalex.org/W2034543587","https://openalex.org/W2034854588","https://openalex.org/W2035747023","https://openalex.org/W2039346468","https://openalex.org/W2042323932","https://openalex.org/W2052188373","https://openalex.org/W2053507997","https://openalex.org/W2053737398","https://openalex.org/W2056050795","https://openalex.org/W2058174458","https://openalex.org/W2070196278","https://openalex.org/W2074287372","https://openalex.org/W2078577465","https://openalex.org/W2086744970","https://openalex.org/W2087697015","https://openalex.org/W2096766502","https://openalex.org/W2097139356","https://openalex.org/W2099744746","https://openalex.org/W2100980426","https://openalex.org/W2101501882","https://openalex.org/W2101651692","https://openalex.org/W2106474670","https://openalex.org/W2107344128","https://openalex.org/W2108096229","https://openalex.org/W2109115947","https://openalex.org/W2110687686","https://openalex.org/W2114741940","https://openalex.org/W2114843025","https://openalex.org/W2116196939","https://openalex.org/W2120748454","https://openalex.org/W2128601422","https://openalex.org/W2129959958","https://openalex.org/W2134110221","https://openalex.org/W2137915568","https://openalex.org/W2138258190","https://openalex.org/W2142360616","https://openalex.org/W2147466071","https://openalex.org/W2147714160","https://openalex.org/W2151273443","https://openalex.org/W2153618895","https://openalex.org/W2154458783","https://openalex.org/W2157016731","https://openalex.org/W2161959295","https://openalex.org/W2164298117","https://openalex.org/W2164424287","https://openalex.org/W2168223461","https://openalex.org/W2234115940","https://openalex.org/W2313676623","https://openalex.org/W2328625438","https://openalex.org/W2331099556","https://openalex.org/W2340039096","https://openalex.org/W2365171358","https://openalex.org/W2407343877","https://openalex.org/W2517051411","https://openalex.org/W2558585189","https://openalex.org/W2558698372","https://openalex.org/W2572636497","https://openalex.org/W2573168460","https://openalex.org/W2586265133","https://openalex.org/W2736848882","https://openalex.org/W2743046540","https://openalex.org/W2749296525","https://openalex.org/W2749320391","https://openalex.org/W2750979181","https://openalex.org/W2754044949","https://openalex.org/W2764200887","https://openalex.org/W2781818639","https://openalex.org/W2783275286","https://openalex.org/W2788490256","https://openalex.org/W2790354851","https://openalex.org/W2790513846","https://openalex.org/W2796111179","https://openalex.org/W2801100401","https://openalex.org/W2809637071","https://openalex.org/W2888174941","https://openalex.org/W2889818881","https://openalex.org/W2900770680","https://openalex.org/W2903794285","https://openalex.org/W2907030787","https://openalex.org/W2911657438","https://openalex.org/W2912626193","https://openalex.org/W2936654574","https://openalex.org/W2941063375","https://openalex.org/W2944545583","https://openalex.org/W2947202640","https://openalex.org/W2947351976","https://openalex.org/W2949769391","https://openalex.org/W2950319780","https://openalex.org/W2954720824","https://openalex.org/W2959867989","https://openalex.org/W2982010568","https://openalex.org/W2982245030","https://openalex.org/W2982368177","https://openalex.org/W2987126840","https://openalex.org/W2987257951","https://openalex.org/W2987577089","https://openalex.org/W2989619704","https://openalex.org/W2998629129","https://openalex.org/W3000106795","https://openalex.org/W3001400847","https://openalex.org/W3004227146","https://openalex.org/W3005419559","https://openalex.org/W3006200949","https://openalex.org/W3006290396","https://openalex.org/W3009975428","https://openalex.org/W3016523338","https://openalex.org/W3025380682","https://openalex.org/W3026082741","https://openalex.org/W3032946224","https://openalex.org/W3036356846","https://openalex.org/W3037408484","https://openalex.org/W3049042795","https://openalex.org/W3054357043","https://openalex.org/W3088063097","https://openalex.org/W3091640917","https://openalex.org/W3098923311","https://openalex.org/W3117198040","https://openalex.org/W3190668953","https://openalex.org/W4230392683","https://openalex.org/W6676717235"],"related_works":["https://openalex.org/W3046984657","https://openalex.org/W2053943328","https://openalex.org/W4226066106","https://openalex.org/W2060814806","https://openalex.org/W2981835341","https://openalex.org/W2157193718","https://openalex.org/W2790180944","https://openalex.org/W2792179313","https://openalex.org/W4311718423","https://openalex.org/W2151866902"],"abstract_inverted_index":{"As":[0],"a":[1],"result,":[2],"BiP":[3,50],"identified":[4],"some":[5],"well-known":[6],"pathways":[7],"related":[8],"to":[9,27],"the":[10,16,22,29,32,35],"investigated":[11],"cancer":[12,43],"type,":[13],"validated":[14],"by":[15],"available":[17],"literature.":[18],"We":[19],"also":[20],"used":[21],"Jaccard":[23],"and":[24,31],"meet-min":[25],"indices":[26],"evaluate":[28],"stability":[30],"similarity":[33],"between":[34],"enrichment":[36,54],"results":[37,47,55],"obtained":[38,46],"from":[39],"each":[40],"couple":[41],"of":[42],"datasets.":[44],"The":[45],"show":[48],"that":[49],"provides":[51],"more":[52],"stable":[53],"than":[56],"other":[57],"tools.":[58]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":4}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
