{"id":"https://openalex.org/W3179932775","doi":"https://doi.org/10.1186/s12859-021-04285-3","title":"MitoTox: a comprehensive mitochondrial toxicity database","display_name":"MitoTox: a comprehensive mitochondrial toxicity database","publication_year":2021,"publication_date":"2021-05-01","ids":{"openalex":"https://openalex.org/W3179932775","doi":"https://doi.org/10.1186/s12859-021-04285-3","mag":"3179932775","pmid":"https://pubmed.ncbi.nlm.nih.gov/34266386"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-021-04285-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04285-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04285-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04285-3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071282053","display_name":"Yu-Te Lin","orcid":"https://orcid.org/0000-0002-6019-5319"},"institutions":[{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Yu-Te Lin","raw_affiliation_strings":["Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan","institution_ids":["https://openalex.org/I16733864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035765669","display_name":"Ko\u2010Hong Lin","orcid":null},"institutions":[{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Ko-Hong Lin","raw_affiliation_strings":["Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan","institution_ids":["https://openalex.org/I16733864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108264848","display_name":"Chi-Jung Huang","orcid":null},"institutions":[{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chi-Jung Huang","raw_affiliation_strings":["Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan","institution_ids":["https://openalex.org/I16733864"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072321698","display_name":"An\u2010Chi Wei","orcid":"https://orcid.org/0000-0001-7927-1636"},"institutions":[{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]},{"id":"https://openalex.org/I99613584","display_name":"National Taipei University","ror":"https://ror.org/03e29r284","country_code":"TW","type":"education","lineage":["https://openalex.org/I99613584"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"An-Chi Wei","raw_affiliation_strings":["Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan. acwei86@ntu.edu.tw","Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan. acwei86@ntu.edu.tw","Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan"],"raw_orcid":"https://orcid.org/0000-0001-7927-1636","affiliations":[{"raw_affiliation_string":"Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan. acwei86@ntu.edu.tw","institution_ids":["https://openalex.org/I16733864","https://openalex.org/I99613584"]},{"raw_affiliation_string":"Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan. acwei86@ntu.edu.tw","institution_ids":["https://openalex.org/I16733864"]},{"raw_affiliation_string":"Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan","institution_ids":["https://openalex.org/I16733864"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5071282053"],"corresponding_institution_ids":["https://openalex.org/I16733864"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.6872,"has_fulltext":true,"cited_by_count":44,"citation_normalized_percentile":{"value":0.91302882,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"22","issue":"S10","first_page":"369","last_page":"369"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10301","display_name":"Mitochondrial Function and Pathology","score":0.9695000052452087,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10301","display_name":"Mitochondrial Function and Pathology","score":0.9695000052452087,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13452","display_name":"GDF15 and Related Biomarkers","score":0.003599999938160181,"subfield":{"id":"https://openalex.org/subfields/2745","display_name":"Rheumatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10294","display_name":"Cell death mechanisms and regulation","score":0.0017000000225380063,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mitochondrial-toxicity","display_name":"Mitochondrial toxicity","score":0.6863842010498047},{"id":"https://openalex.org/keywords/mitochondrion","display_name":"Mitochondrion","score":0.6473962068557739},{"id":"https://openalex.org/keywords/toxicity","display_name":"Toxicity","score":0.6225969195365906},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5813984870910645},{"id":"https://openalex.org/keywords/reference-database","display_name":"Reference database","score":0.47092002630233765},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4194837510585785},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4070882499217987},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.35667574405670166},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3475764989852905},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.18316176533699036},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.10936444997787476}],"concepts":[{"id":"https://openalex.org/C2777071529","wikidata":"https://www.wikidata.org/wiki/Q12796879","display_name":"Mitochondrial toxicity","level":3,"score":0.6863842010498047},{"id":"https://openalex.org/C28859421","wikidata":"https://www.wikidata.org/wiki/Q39572","display_name":"Mitochondrion","level":2,"score":0.6473962068557739},{"id":"https://openalex.org/C29730261","wikidata":"https://www.wikidata.org/wiki/Q274160","display_name":"Toxicity","level":2,"score":0.6225969195365906},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5813984870910645},{"id":"https://openalex.org/C2984717058","wikidata":"https://www.wikidata.org/wiki/Q1789476","display_name":"Reference database","level":2,"score":0.47092002630233765},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4194837510585785},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4070882499217987},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.35667574405670166},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3475764989852905},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.18316176533699036},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.10936444997787476},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008928","descriptor_name":"Mitochondria","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008928","descriptor_name":"Mitochondria","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008928","descriptor_name":"Mitochondria","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D064420","descriptor_name":"Drug-Related Side Effects and Adverse Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064420","descriptor_name":"Drug-Related Side Effects and Adverse Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064420","descriptor_name":"Drug-Related Side Effects and Adverse Reactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-021-04285-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04285-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04285-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34266386","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34266386","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:f501ed36575c4e2b8b087960ee87eb79","is_oa":true,"landing_page_url":"https://doaj.org/article/f501ed36575c4e2b8b087960ee87eb79","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 22, Iss S10, Pp 1-14 (2021)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8283953","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8283953","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-021-04285-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04285-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04285-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.6399999856948853}],"awards":[{"id":"https://openalex.org/G4488922601","display_name":null,"funder_award_id":"MOST-109-2636-B- 002 -001","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"},{"id":"https://openalex.org/G698545763","display_name":null,"funder_award_id":"MOST-108-2636-B- 002 -001","funder_id":"https://openalex.org/F4320322795","funder_display_name":"Ministry of Science and Technology, Taiwan"}],"funders":[{"id":"https://openalex.org/F4320322795","display_name":"Ministry of Science and Technology, Taiwan","ror":"https://ror.org/02kv4zf79"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3179932775.pdf","grobid_xml":"https://content.openalex.org/works/W3179932775.grobid-xml"},"referenced_works_count":44,"referenced_works":["https://openalex.org/W332441845","https://openalex.org/W1687849153","https://openalex.org/W1962922160","https://openalex.org/W1967122702","https://openalex.org/W1970168377","https://openalex.org/W1980445860","https://openalex.org/W1996561782","https://openalex.org/W1998101020","https://openalex.org/W2010154445","https://openalex.org/W2066318517","https://openalex.org/W2070427587","https://openalex.org/W2080540870","https://openalex.org/W2089663038","https://openalex.org/W2101893734","https://openalex.org/W2103562463","https://openalex.org/W2113917581","https://openalex.org/W2117340049","https://openalex.org/W2119879117","https://openalex.org/W2124559003","https://openalex.org/W2129968561","https://openalex.org/W2136640051","https://openalex.org/W2139932193","https://openalex.org/W2143505819","https://openalex.org/W2162143298","https://openalex.org/W2168988732","https://openalex.org/W2172026762","https://openalex.org/W2189911347","https://openalex.org/W2282754507","https://openalex.org/W2327217663","https://openalex.org/W2340623498","https://openalex.org/W2402268763","https://openalex.org/W2403976639","https://openalex.org/W2536598862","https://openalex.org/W2740558629","https://openalex.org/W2744581458","https://openalex.org/W2767891136","https://openalex.org/W2809751535","https://openalex.org/W2887410030","https://openalex.org/W2899241243","https://openalex.org/W2906755148","https://openalex.org/W2978810474","https://openalex.org/W2987812001","https://openalex.org/W3007285851","https://openalex.org/W4255220565"],"related_works":["https://openalex.org/W2070873543","https://openalex.org/W2298250249","https://openalex.org/W2403172130","https://openalex.org/W2029126048","https://openalex.org/W4220740509","https://openalex.org/W4239146110","https://openalex.org/W2591592209","https://openalex.org/W2096425711","https://openalex.org/W2053010992","https://openalex.org/W3179932775"],"abstract_inverted_index":{"BACKGROUND:":[0],"Mitochondria":[1],"play":[2],"essential":[3],"roles":[4],"in":[5],"regulating":[6],"cellular":[7],"functions.":[8],"Some":[9],"drug":[10],"treatments":[11],"and":[12,24,41,54,82,86,99,108,123,152,165,177],"molecular":[13],"interventions":[14],"have":[15,19],"been":[16],"reported":[17],"to":[18,89,163],"off-target":[20],"effects":[21],"damaging":[22],"mitochondria":[23],"causing":[25],"severe":[26],"side":[27,150],"effects.":[28],"The":[29,112],"development":[30],"of":[31,37,170],"a":[32,62,157],"database":[33,66,113,160],"for":[34,46],"the":[35],"management":[36],"mitochondrial":[38,64,90,121,127],"toxicity-related":[39],"molecules":[40],"their":[42,83],"targets":[43],"is":[44,71,180],"important":[45],"further":[47],"analyses.":[48],"RESULTS:":[49],"To":[50],"correlate":[51],"chemical,":[52],"biological":[53],"mechanistic":[55,147],"information":[56,78],"on":[57],"clinically":[58],"relevant":[59],"mitochondria-related":[60,80],"toxicity,":[61],"comprehensive":[63,77],"toxicity":[65,91,173],"(MitoTox)":[67],"was":[68],"developed.":[69],"MitoTox":[70,131,155,171,179],"an":[72],"electronic":[73,101],"repository":[74],"that":[75],"integrates":[76],"about":[79],"toxins":[81],"targets.":[84],"Information":[85],"data":[87,132],"related":[88],"originate":[92],"from":[93],"various":[94],"sources,":[95],"including":[96,138],"scientific":[97],"journals":[98],"other":[100,166],"databases.":[102,167],"These":[103],"resources":[104],"were":[105],"manually":[106],"verified":[107],"extracted":[109],"into":[110],"MitoTox.":[111],"currently":[114],"contains":[115,134],"over":[116,135],"1400":[117],"small-molecule":[118],"compounds,":[119],"870":[120],"targets,":[122],"more":[124],"than":[125],"4100":[126],"toxin-target":[128],"associations.":[129],"Each":[130],"record":[133],"30":[136],"fields,":[137],"biochemical":[139],"properties,":[140],"therapeutic":[141],"classification,":[142,174],"target":[143],"proteins,":[144],"toxicological":[145],"data,":[146],"information,":[148],"clinical":[149],"effects,":[151],"references.":[153],"CONCLUSIONS:":[154],"provides":[156],"fully":[158],"searchable":[159],"with":[161],"links":[162],"references":[164],"Potential":[168],"applications":[169],"include":[172],"prediction,":[175],"reference":[176],"education.":[178],"available":[181],"online":[182],"at":[183],"http://www.mitotox.org":[184],".":[185]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":15},{"year":2022,"cited_by_count":11}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
